RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 VGLL2Q8N8G2 317 aa14.94□□□□□ -0.02
ACTN1-221ENST00000556571 NKX2-3Q8TAU0 364 aa14.94□□□□□ -0.02
ACTN1-221ENST00000556571 SRRDQ9UH36 339 aa14.94□□□□□ -0.02
ACTN1-221ENST00000556571 RPAP1Q9BWH6 1393 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-221ENST00000556571 KIF16BQ96L93 1317 aa14.93□□□□□ -0.02
ACTN1-221ENST00000556571 ARAP2Q8WZ64 1704 aa14.93□□□□□ -0.02
ACTN1-221ENST00000556571 IFIT1P09914 478 aaKnown RBP14.93□□□□□ -0.02
ACTN1-221ENST00000556571 PSMC4P43686 418 aa14.93□□□□□ -0.02
ACTN1-221ENST00000556571 MIGA2Q7L4E1 593 aa14.93□□□□□ -0.02
ACTN1-221ENST00000556571 ANKRD44Q8N8A2 993 aa14.93□□□□□ -0.02
ACTN1-221ENST00000556571 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-221ENST00000556571 FAM151AQ8WW52 585 aa14.93□□□□□ -0.02
ACTN1-221ENST00000556571 CPA4Q9UI42 421 aa14.93□□□□□ -0.02
ACTN1-221ENST00000556571 PDHXO00330 501 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 INPP5BP32019 993 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 GRK4P32298 578 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 MTFR1Q15390 333 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 PUM3Q15397 648 aaKnown RBP14.92□□□□□ -0.02
ACTN1-221ENST00000556571 WDR66Q8TBY9 1149 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 RAET1EQ8TD07 263 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 DPF3Q92784 378 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 TRIM47Q96LD4 638 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 ZNF112Q9UJU3 913 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 KCNH4Q9UQ05 1017 aa14.92□□□□□ -0.02
ACTN1-221ENST00000556571 ECM2O94769 699 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-221ENST00000556571 FMNL1O95466 1100 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-221ENST00000556571 FGFR2P21802 821 aa14.91□□□□□ -0.02
ACTN1-221ENST00000556571 OSBPP22059 807 aa14.91□□□□□ -0.02
ACTN1-221ENST00000556571 CTGFP29279 349 aa14.91□□□□□ -0.02
ACTN1-221ENST00000556571 SHISA4Q96DD7 197 aa14.91□□□□□ -0.02
ACTN1-221ENST00000556571 GJB1P08034 283 aa14.9□□□□□ -0.02
ACTN1-221ENST00000556571 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
ACTN1-221ENST00000556571 HTATIP2Q9BUP3 242 aa14.9□□□□□ -0.02
ACTN1-221ENST00000556571 ADGRA2Q96PE1 1338 aa14.9□□□□□ -0.02
ACTN1-221ENST00000556571 GJA8P48165 433 aa14.89□□□□□ -0.03
ACTN1-221ENST00000556571 UBXN2AP68543 259 aa14.89□□□□□ -0.03
ACTN1-221ENST00000556571 MOGSQ13724 837 aa14.89□□□□□ -0.03
ACTN1-221ENST00000556571 NOL9Q5SY16 702 aaKnown RBP14.89□□□□□ -0.03
ACTN1-221ENST00000556571 CDC42EP5Q6NZY7 148 aa14.89□□□□□ -0.03
ACTN1-221ENST00000556571 KLHDC4Q8TBB5 520 aa14.89□□□□□ -0.03
ACTN1-221ENST00000556571 LPIN2Q92539 896 aa14.89□□□□□ -0.03
ACTN1-221ENST00000556571 PARK7Q99497 189 aaKnown RBP14.89□□□□□ -0.03
ACTN1-221ENST00000556571 BIN2Q9UBW5 565 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-221ENST00000556571 MYPNQ86TC9 1320 aa14.89□□□□□ -0.03
ACTN1-221ENST00000556571 EYA2O00167 538 aa14.88□□□□□ -0.03
ACTN1-221ENST00000556571 CXCL11O14625 94 aa14.88□□□□□ -0.03
ACTN1-221ENST00000556571 CCL5P13501 91 aa14.88□□□□□ -0.03
ACTN1-221ENST00000556571 SLC5A1P13866 664 aa14.88□□□□□ -0.03
ACTN1-221ENST00000556571 FCGRTP55899 365 aa14.88□□□□□ -0.03
ACTN1-221ENST00000556571 TCP10Q12799 353 aa14.88□□□□□ -0.03
ACTN1-221ENST00000556571 RNF208Q9H0X6 261 aa14.88□□□□□ -0.03
ACTN1-221ENST00000556571 DAGLAQ9Y4D2 1042 aa14.88□□□□□ -0.03
ACTN1-221ENST00000556571 RANBP2P49792 3224 aaKnown RBP14.87□□□□□ -0.03
ACTN1-221ENST00000556571 BCRP11274 1271 aa14.87□□□□□ -0.03
ACTN1-221ENST00000556571 NFIAQ12857 509 aa14.87□□□□□ -0.03
ACTN1-221ENST00000556571 UBE2Q1Q7Z7E8 422 aa14.87□□□□□ -0.03
ACTN1-221ENST00000556571 MRPL50Q8N5N7 158 aaKnown RBP14.87□□□□□ -0.03
ACTN1-221ENST00000556571 USP44Q9H0E7 712 aa14.87□□□□□ -0.03
ACTN1-221ENST00000556571 USP40Q9NVE5 1235 aa14.87□□□□□ -0.03
ACTN1-221ENST00000556571 RBM27Q9P2N5 1060 aaKnown RBP14.87□□□□□ -0.03
ACTN1-221ENST00000556571 NR2E3Q9Y5X4 410 aa14.87□□□□□ -0.03
ACTN1-221ENST00000556571 PTPRCP08575 1304 aa14.87□□□□□ -0.03
ACTN1-221ENST00000556571 SZT2Q5T011 3432 aa14.86□□□□□ -0.03
ACTN1-221ENST00000556571 ANP32CO43423 234 aa14.86□□□□□ -0.03
ACTN1-221ENST00000556571 PRKCZQ05513 592 aa14.86□□□□□ -0.03
ACTN1-221ENST00000556571 DIXDC1Q155Q3 683 aa14.86□□□□□ -0.03
ACTN1-221ENST00000556571 GPAT2Q6NUI2 795 aa14.86□□□□□ -0.03
ACTN1-221ENST00000556571 FASTKD5Q7L8L6 764 aaKnown RBP14.86□□□□□ -0.03
ACTN1-221ENST00000556571 SLAIN1Q8ND83 568 aa14.86□□□□□ -0.03
ACTN1-221ENST00000556571 GNL3LQ9NVN8 582 aaKnown RBP14.86□□□□□ -0.03
ACTN1-221ENST00000556571 FAM198AQ9UFP1 575 aa14.86□□□□□ -0.03
ACTN1-221ENST00000556571 ZSWIM8A7E2V4 1837 aa14.85□□□□□ -0.03
ACTN1-221ENST00000556571 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
ACTN1-221ENST00000556571 LDHBP07195 334 aaKnown RBP14.85□□□□□ -0.03
ACTN1-221ENST00000556571 CYP2C8P10632 490 aa14.85□□□□□ -0.03
ACTN1-221ENST00000556571 CAPN2P17655 700 aa14.85□□□□□ -0.03
ACTN1-221ENST00000556571 PRDX5P30044 214 aa14.85□□□□□ -0.03
ACTN1-221ENST00000556571 RFX5P48382 616 aaPredicted RBP14.85□□□□□ -0.03
ACTN1-221ENST00000556571 U2AF1L4Q8WU68 220 aaKnown RBP14.85□□□□□ -0.03
ACTN1-221ENST00000556571 PICK1Q9NRD5 415 aa14.84□□□□□ -0.03
ACTN1-221ENST00000556571 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
ACTN1-221ENST00000556571 ZHX2Q9Y6X8 837 aa14.84□□□□□ -0.03
ACTN1-221ENST00000556571 A0A0G2JLL6 359 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-221ENST00000556571 PHF20L1A8MW92 1017 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 ADCY3O60266 1144 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 FARP2O94887 1054 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-221ENST00000556571 SGPL1O95470 568 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 PTPRAP18433 802 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 ATG9AQ7Z3C6 839 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 PRRT2Q7Z6L0 340 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-221ENST00000556571 ZFPM1Q8IX07 1006 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 SCYL3Q8IZE3 742 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 IDI2Q9BXS1 227 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 UNC93B1Q9H1C4 597 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 PRO3102Q9H379 93 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 CEP126Q9P2H0 1117 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 SLC45A1Q9Y2W3 748 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 SALL1Q9NSC2 1324 aa14.83□□□□□ -0.04
ACTN1-221ENST00000556571 SEMA3EO15041 775 aa14.82□□□□□ -0.04
ACTN1-221ENST00000556571 ZBTB7BO15156 539 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms