RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 IGSF3O75054 1194 aa15.56■□□□□ 0.08
SNX6-207ENST00000556303 MKRN3Q13064 507 aaKnown RBP15.56■□□□□ 0.08
SNX6-207ENST00000556303 RASGRF1Q13972 1273 aa15.56■□□□□ 0.08
SNX6-207ENST00000556303 DCAF15Q66K64 600 aa15.56■□□□□ 0.08
SNX6-207ENST00000556303 CTU1Q7Z7A3 348 aaKnown RBP15.56■□□□□ 0.08
SNX6-207ENST00000556303 IFNL1Q8IU54 200 aa15.56■□□□□ 0.08
SNX6-207ENST00000556303 CSADQ9Y600 493 aa15.56■□□□□ 0.08
SNX6-207ENST00000556303 GPR25O00155 361 aa15.55■□□□□ 0.08
SNX6-207ENST00000556303 TBC1D8O95759 1140 aa15.55■□□□□ 0.08
SNX6-207ENST00000556303 CDC42EP5Q6NZY7 148 aa15.55■□□□□ 0.08
SNX6-207ENST00000556303 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
SNX6-207ENST00000556303 ITPRIPQ8IWB1 547 aa15.55■□□□□ 0.08
SNX6-207ENST00000556303 NEUROD6Q96NK8 337 aa15.55■□□□□ 0.08
SNX6-207ENST00000556303 NOP58Q9Y2X3 529 aaKnown RBP15.55■□□□□ 0.08
SNX6-207ENST00000556303 GAKO14976 1311 aa15.54■□□□□ 0.08
SNX6-207ENST00000556303 MAP4K4O95819 1239 aaPredicted RBP15.54■□□□□ 0.08
SNX6-207ENST00000556303 UQCRFS1P1P0C7P4 283 aa15.54■□□□□ 0.08
SNX6-207ENST00000556303 ARID4AP29374 1257 aaPredicted RBP15.54■□□□□ 0.08
SNX6-207ENST00000556303 CACNB3P54284 484 aa15.54■□□□□ 0.08
SNX6-207ENST00000556303 DIXDC1Q155Q3 683 aa15.54■□□□□ 0.08
SNX6-207ENST00000556303 GORABQ5T7V8 394 aa15.54■□□□□ 0.08
SNX6-207ENST00000556303 OPTNQ96CV9 577 aa15.54■□□□□ 0.08
SNX6-207ENST00000556303 IDI2Q9BXS1 227 aa15.54■□□□□ 0.08
SNX6-207ENST00000556303 LAMB1P07942 1786 aa15.54■□□□□ 0.08
SNX6-207ENST00000556303 RLBP1P12271 317 aa15.53■□□□□ 0.08
SNX6-207ENST00000556303 GTF2A2P52657 109 aa15.53■□□□□ 0.08
SNX6-207ENST00000556303 VGLL4Q14135 290 aa15.53■□□□□ 0.08
SNX6-207ENST00000556303 ERICH6Q7L0X2 663 aa15.53■□□□□ 0.08
SNX6-207ENST00000556303 DZIP1Q86YF9 867 aaKnown RBP15.53■□□□□ 0.08
SNX6-207ENST00000556303 CDAN1Q8IWY9 1227 aa15.53■□□□□ 0.08
SNX6-207ENST00000556303 ZNF296Q8WUU4 475 aaPredicted RBP15.53■□□□□ 0.08
SNX6-207ENST00000556303 ZNF341Q9BYN7 854 aa15.53■□□□□ 0.08
SNX6-207ENST00000556303 ELP3Q9H9T3 547 aa15.53■□□□□ 0.08
SNX6-207ENST00000556303 USP40Q9NVE5 1235 aa15.53■□□□□ 0.08
SNX6-207ENST00000556303 FKTNO75072 461 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 ENTPD3O75355 529 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 GJA5P36382 358 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 RGS19P49795 217 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 GSTO1P78417 241 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 ERO1BQ86YB8 467 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 SPATA5Q8NB90 893 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 MS4A4AQ96JQ5 239 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 ABCF2Q9UG63 623 aa15.52■□□□□ 0.08
SNX6-207ENST00000556303 SPDYE5A6NIY4 337 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 CCDC85CA6NKD9 419 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 IGF2BP3O00425 579 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNX6-207ENST00000556303 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
SNX6-207ENST00000556303 SURF6O75683 361 aaKnown RBP15.51■□□□□ 0.07
SNX6-207ENST00000556303 LDHCP07864 332 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 CCDC158Q5M9N0 1113 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 ZNF512BQ96KM6 892 aaPredicted RBP15.51■□□□□ 0.07
SNX6-207ENST00000556303 WRNIP1Q96S55 665 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 CHMP4BQ9H444 224 aaKnown RBP15.51■□□□□ 0.07
SNX6-207ENST00000556303 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
SNX6-207ENST00000556303 HMG20BQ9P0W2 317 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 FAM198AQ9UFP1 575 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 ZNF112Q9UJU3 913 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.51■□□□□ 0.07
SNX6-207ENST00000556303 MYH2Q9UKX2 1941 aa15.51■□□□□ 0.07
SNX6-207ENST00000556303 GPR75-ASB3A0A0A6YYF3 556 aa15.5■□□□□ 0.07
SNX6-207ENST00000556303 PPATQ06203 517 aa15.5■□□□□ 0.07
SNX6-207ENST00000556303 NFIAQ12857 509 aa15.5■□□□□ 0.07
SNX6-207ENST00000556303 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
SNX6-207ENST00000556303 TNNI3KQ59H18 835 aa15.5■□□□□ 0.07
SNX6-207ENST00000556303 FPGT-TNNI3KV9GXZ4 949 aa15.5■□□□□ 0.07
SNX6-207ENST00000556303 MROH7-TTC4A0A0A0MT08 1334 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 WDHD1O75717 1129 aaPredicted RBP15.49■□□□□ 0.07
SNX6-207ENST00000556303 MAP3K10Q02779 954 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 MECOMQ03112 1051 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 PPIL2Q13356 520 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 HSP90AB4PQ58FF6 505 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 CEP85Q6P2H3 762 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 ERC1Q8IUD2 1116 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 PTPN18Q99952 460 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 SNCAIPQ9Y6H5 919 aa15.49■□□□□ 0.07
SNX6-207ENST00000556303 OTOFQ9HC10 1997 aa15.48■□□□□ 0.07
SNX6-207ENST00000556303 CETPP11597 493 aa15.48■□□□□ 0.07
SNX6-207ENST00000556303 MCAMP43121 646 aa15.48■□□□□ 0.07
SNX6-207ENST00000556303 BTDP43251 543 aa15.48■□□□□ 0.07
SNX6-207ENST00000556303 TCP10Q12799 353 aa15.48■□□□□ 0.07
SNX6-207ENST00000556303 SNAPC2Q13487 334 aa15.48■□□□□ 0.07
SNX6-207ENST00000556303 NOL9Q5SY16 702 aaKnown RBP15.48■□□□□ 0.07
SNX6-207ENST00000556303 MIGA2Q7L4E1 593 aa15.48■□□□□ 0.07
SNX6-207ENST00000556303 NSUN4Q96CB9 384 aaKnown RBP15.48■□□□□ 0.07
SNX6-207ENST00000556303 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
SNX6-207ENST00000556303 AK9Q5TCS8 1911 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 CCL15-CCL14A0A0B4J2E2 113 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 RGS3P49796 1198 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 CCL15Q16663 113 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 TTC39AQ5SRH9 613 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 FBXO46Q6PJ61 603 aaPredicted RBP15.47■□□□□ 0.07
SNX6-207ENST00000556303 TMED8Q6PL24 325 aaPredicted RBP15.47■□□□□ 0.07
SNX6-207ENST00000556303 RPAP2Q8IXW5 612 aaPredicted RBP15.47■□□□□ 0.07
SNX6-207ENST00000556303 BRI3BPQ8WY22 251 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 ZKSCAN4Q969J2 545 aaPredicted RBP15.47■□□□□ 0.07
SNX6-207ENST00000556303 OTUD5Q96G74 571 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 ERO1AQ96HE7 468 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 R3HDMLQ9H3Y0 253 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 C1orf115Q9H7X2 142 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 ZFYVE28Q9HCC9 887 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms