RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
ABCD4-223ENST00000555904 CRNKL1Q9BZJ0 848 aaKnown RBP15.03■□□□□ -0
ABCD4-223ENST00000555904 A0A0D9SFI3 127 aa15.02■□□□□ -0
ABCD4-223ENST00000555904 SHTN1A0MZ66 631 aa15.02■□□□□ -0
ABCD4-223ENST00000555904 CHGBP05060 677 aa15.02■□□□□ -0
ABCD4-223ENST00000555904 VEGFAP15692 232 aaPredicted RBP15.02■□□□□ -0
ABCD4-223ENST00000555904 GNAT2P19087 354 aa15.02■□□□□ -0
ABCD4-223ENST00000555904 SLFNL1Q499Z3 407 aa15.02■□□□□ -0
ABCD4-223ENST00000555904 APOBEC3HQ6NTF7 200 aaKnown RBP15.02■□□□□ -0
ABCD4-223ENST00000555904 USP50Q70EL3 339 aaPredicted RBP15.02■□□□□ -0
ABCD4-223ENST00000555904 OSBP2Q969R2 916 aa15.02■□□□□ -0
ABCD4-223ENST00000555904 PUS7LQ9H0K6 701 aaKnown RBP15.02■□□□□ -0
ABCD4-223ENST00000555904 USP40Q9NVE5 1235 aa15.02■□□□□ -0
ABCD4-223ENST00000555904 WDR90Q96KV7 1748 aa15.02□□□□□ -0.01
ABCD4-223ENST00000555904 CCDC171Q6TFL3 1326 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 M0R2C6 588 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 WNT10BO00744 389 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 GPAA1O43292 621 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 PPP4CP60510 307 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 KIAA1211Q6ZU35 1233 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 TEX11Q8IYF3 940 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 PRMT6Q96LA8 375 aaPredicted RBP15.01□□□□□ -0.01
ABCD4-223ENST00000555904 SEC62Q99442 399 aaKnown RBP15.01□□□□□ -0.01
ABCD4-223ENST00000555904 ARMT1Q9H993 441 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 MYH7P12883 1935 aa15.01□□□□□ -0.01
ABCD4-223ENST00000555904 APPP05067 770 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 USP5P45974 858 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 DYNLL1P63167 89 aaKnown RBP15□□□□□ -0.01
ABCD4-223ENST00000555904 TNFAIP1Q13829 316 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 NBPF9Q3BBW0 867 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 EAPPQ56P03 285 aaPredicted RBP15□□□□□ -0.01
ABCD4-223ENST00000555904 CDC42EP5Q6NZY7 148 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 LCORLQ8N3X6 602 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 TRPM4Q8TD43 1214 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
ABCD4-223ENST00000555904 RIOK1Q9BRS2 568 aaKnown RBP15□□□□□ -0.01
ABCD4-223ENST00000555904 ESYT1Q9BSJ8 1104 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 NACAP1Q9BZK3 213 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 TAF1DQ9H5J8 278 aaPredicted RBP15□□□□□ -0.01
ABCD4-223ENST00000555904 TDRD3Q9H7E2 651 aaKnown RBP15□□□□□ -0.01
ABCD4-223ENST00000555904 RRAGCQ9HB90 399 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 VEZTQ9HBM0 779 aa15□□□□□ -0.01
ABCD4-223ENST00000555904 GPBP1L1Q9HC44 474 aaPredicted RBP15□□□□□ -0.01
ABCD4-223ENST00000555904 SCN4AP35499 1836 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 CLRN2A0PK11 232 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 SGSM2O43147 1006 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 REC8O95072 547 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 EGFRP00533 1210 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 YY1P25490 414 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 TNNI2P48788 182 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 APOBEC3FQ8IUX4 373 aaKnown RBP14.99□□□□□ -0.01
ABCD4-223ENST00000555904 AMOTL1Q8IY63 956 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 ZBED3Q96IU2 234 aaPredicted RBP14.99□□□□□ -0.01
ABCD4-223ENST00000555904 STRBPQ96SI9 672 aaKnown RBP14.99□□□□□ -0.01
ABCD4-223ENST00000555904 PCDHAC2Q9Y5I4 1007 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 SLC4A4Q9Y6R1 1079 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 MYH2Q9UKX2 1941 aa14.99□□□□□ -0.01
ABCD4-223ENST00000555904 MYO5AQ9Y4I1 1855 aaKnown RBP14.99□□□□□ -0.01
ABCD4-223ENST00000555904 ADAMTSL1Q8N6G6 1762 aa14.98□□□□□ -0.01
ABCD4-223ENST00000555904 CCDC129Q6ZRS4 1044 aa14.98□□□□□ -0.01
ABCD4-223ENST00000555904 ZC3H15Q8WU90 426 aaKnown RBP14.98□□□□□ -0.01
ABCD4-223ENST00000555904 DCPSQ96C86 337 aaKnown RBP14.98□□□□□ -0.01
ABCD4-223ENST00000555904 ANO2Q9NQ90 1003 aa14.98□□□□□ -0.01
ABCD4-223ENST00000555904 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
ABCD4-223ENST00000555904 GGA3Q9NZ52 723 aa14.98□□□□□ -0.01
ABCD4-223ENST00000555904 ZNF70Q9UC06 446 aaPredicted RBP14.98□□□□□ -0.01
ABCD4-223ENST00000555904 RPAP1Q9BWH6 1393 aaPredicted RBP14.98□□□□□ -0.01
ABCD4-223ENST00000555904 TDO2P48775 406 aa14.97□□□□□ -0.01
ABCD4-223ENST00000555904 RHBDL3P58872 404 aa14.97□□□□□ -0.01
ABCD4-223ENST00000555904 PICALMQ13492 652 aa14.97□□□□□ -0.01
ABCD4-223ENST00000555904 ANGEL2Q5VTE6 544 aaKnown RBP14.97□□□□□ -0.01
ABCD4-223ENST00000555904 FKBP1CQ5VVH2 108 aa14.97□□□□□ -0.01
ABCD4-223ENST00000555904 ZNF589Q86UQ0 364 aaPredicted RBP14.97□□□□□ -0.01
ABCD4-223ENST00000555904 TGFBRAP1Q8WUH2 860 aa14.97□□□□□ -0.01
ABCD4-223ENST00000555904 NMRK2Q9NPI5 230 aa14.97□□□□□ -0.01
ABCD4-223ENST00000555904 CLEC11AQ9Y240 323 aa14.97□□□□□ -0.01
ABCD4-223ENST00000555904 PITPNM2Q9BZ72 1349 aa14.96□□□□□ -0.01
ABCD4-223ENST00000555904 TCP10L2B9ZVM9 353 aa14.96□□□□□ -0.01
ABCD4-223ENST00000555904 PATL2C9JE40 543 aaKnown RBP14.96□□□□□ -0.01
ABCD4-223ENST00000555904 CACNB3P54284 484 aa14.96□□□□□ -0.01
ABCD4-223ENST00000555904 GIMAP6Q6P9H5 292 aa14.96□□□□□ -0.01
ABCD4-223ENST00000555904 SULF1Q8IWU6 871 aa14.96□□□□□ -0.01
ABCD4-223ENST00000555904 SDR42E1Q8WUS8 393 aa14.96□□□□□ -0.01
ABCD4-223ENST00000555904 IDI2Q9BXS1 227 aa14.96□□□□□ -0.01
ABCD4-223ENST00000555904 NAPBQ9H115 298 aa14.96□□□□□ -0.01
ABCD4-223ENST00000555904 FLT1P17948 1338 aa14.95□□□□□ -0.02
ABCD4-223ENST00000555904 POTECB2RU33 542 aa14.95□□□□□ -0.02
ABCD4-223ENST00000555904 ENTPD3O75355 529 aa14.95□□□□□ -0.02
ABCD4-223ENST00000555904 WDHD1O75717 1129 aaPredicted RBP14.95□□□□□ -0.02
ABCD4-223ENST00000555904 HIRAP54198 1017 aaPredicted RBP14.95□□□□□ -0.02
ABCD4-223ENST00000555904 LDHDQ86WU2 507 aa14.95□□□□□ -0.02
ABCD4-223ENST00000555904 MAPKAPK5Q8IW41 473 aa14.95□□□□□ -0.02
ABCD4-223ENST00000555904 ZSCAN29Q8IWY8 852 aaPredicted RBP14.95□□□□□ -0.02
ABCD4-223ENST00000555904 DSCC1Q9BVC3 393 aa14.95□□□□□ -0.02
ABCD4-223ENST00000555904 PRKAB2O43741 272 aa14.94□□□□□ -0.02
ABCD4-223ENST00000555904 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
ABCD4-223ENST00000555904 HSPD1P10809 573 aaKnown RBP14.94□□□□□ -0.02
ABCD4-223ENST00000555904 TCP10Q12799 353 aa14.94□□□□□ -0.02
ABCD4-223ENST00000555904 NFIAQ12857 509 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms