RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 KIAA1211Q6ZU35 1233 aa6.89□□□□□ -1.31
KTN1-222ENST00000555506 HS2ST1Q7LGA3 356 aa6.89□□□□□ -1.31
KTN1-222ENST00000555506 DZIP1LQ8IYY4 767 aaKnown RBP6.89□□□□□ -1.31
KTN1-222ENST00000555506 GLIS3Q8NEA6 775 aa6.89□□□□□ -1.31
KTN1-222ENST00000555506 CCSER2Q9H7U1 834 aa6.89□□□□□ -1.31
KTN1-222ENST00000555506 PPP4R2Q9NY27 417 aa6.89□□□□□ -1.31
KTN1-222ENST00000555506 PTPN12Q05209 780 aaKnown RBP6.88□□□□□ -1.31
KTN1-222ENST00000555506 GLB1P16278 677 aa6.87□□□□□ -1.31
KTN1-222ENST00000555506 ARL4DP49703 201 aa6.87□□□□□ -1.31
KTN1-222ENST00000555506 SF3A1Q15459 793 aaKnown RBP6.87□□□□□ -1.31
KTN1-222ENST00000555506 ZNF423Q2M1K9 1284 aa6.87□□□□□ -1.31
KTN1-222ENST00000555506 PRPF40BQ6NWY9 871 aaKnown RBP6.87□□□□□ -1.31
KTN1-222ENST00000555506 UBL7Q96S82 380 aaPredicted RBP6.87□□□□□ -1.31
KTN1-222ENST00000555506 TINF2Q9BSI4 451 aa6.87□□□□□ -1.31
KTN1-222ENST00000555506 ABCB6Q9NP58 842 aa6.87□□□□□ -1.31
KTN1-222ENST00000555506 GGT7Q9UJ14 662 aa6.87□□□□□ -1.31
KTN1-222ENST00000555506 DDX41Q9UJV9 622 aaKnown RBP6.87□□□□□ -1.31
KTN1-222ENST00000555506 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
KTN1-222ENST00000555506 ZNF394Q53GI3 561 aa6.86□□□□□ -1.31
KTN1-222ENST00000555506 USP48Q86UV5 1035 aa6.86□□□□□ -1.31
KTN1-222ENST00000555506 C3orf58Q8NDZ4 430 aa6.86□□□□□ -1.31
KTN1-222ENST00000555506 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
KTN1-222ENST00000555506 ACBD3Q9H3P7 528 aa6.86□□□□□ -1.31
KTN1-222ENST00000555506 SOX17Q9H6I2 414 aaPredicted RBP6.86□□□□□ -1.31
KTN1-222ENST00000555506 LOC105371045A0A1W2PR82 267 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 ITPKAP23677 461 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 RACK1P63244 317 aaKnown RBP6.85□□□□□ -1.31
KTN1-222ENST00000555506 JAG1P78504 1218 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 PCDH1Q08174 1060 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 ZNF654Q8IZM8 581 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 ZNF576Q9H609 170 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 DLGAP3O95886 979 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 XRCC5P13010 732 aaKnown RBP6.85□□□□□ -1.31
KTN1-222ENST00000555506 FCGRTP55899 365 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 GSTM4Q03013 218 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
KTN1-222ENST00000555506 ERMP1Q7Z2K6 904 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 SLC43A3Q8NBI5 491 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 CAPN10Q9HC96 672 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 TTF2Q9UNY4 1162 aaKnown RBP6.85□□□□□ -1.31
KTN1-222ENST00000555506 PCDHGB7Q9Y5F8 929 aa6.85□□□□□ -1.31
KTN1-222ENST00000555506 LOC100289279A0A1B0GTE1 492 aa6.84□□□□□ -1.31
KTN1-222ENST00000555506 ANKRD24Q8TF21 1146 aa6.84□□□□□ -1.31
KTN1-222ENST00000555506 NOC4LQ9BVI4 516 aaKnown RBP6.84□□□□□ -1.31
KTN1-222ENST00000555506 RUSC1Q9BVN2 902 aa6.84□□□□□ -1.31
KTN1-222ENST00000555506 USP26Q9BXU7 913 aa6.84□□□□□ -1.31
KTN1-222ENST00000555506 NRSN2Q9GZP1 204 aa6.84□□□□□ -1.31
KTN1-222ENST00000555506 PPM1HQ9ULR3 514 aa6.84□□□□□ -1.31
KTN1-222ENST00000555506 SHROOM4Q9ULL8 1493 aa6.83□□□□□ -1.32
KTN1-222ENST00000555506 TNNI2P48788 182 aa6.83□□□□□ -1.32
KTN1-222ENST00000555506 DTHD1Q6ZMT9 781 aa6.83□□□□□ -1.32
KTN1-222ENST00000555506 PRR23CQ6ZRP0 262 aa6.83□□□□□ -1.32
KTN1-222ENST00000555506 ARMC10Q8N2F6 343 aa6.83□□□□□ -1.32
KTN1-222ENST00000555506 UBXN4Q92575 508 aa6.83□□□□□ -1.32
KTN1-222ENST00000555506 RNF208Q9H0X6 261 aa6.83□□□□□ -1.32
KTN1-222ENST00000555506 B3GALT4O96024 378 aa6.82□□□□□ -1.32
KTN1-222ENST00000555506 CTSBP07858 339 aa6.82□□□□□ -1.32
KTN1-222ENST00000555506 FAM46AQ96IP4 442 aaKnown RBP6.82□□□□□ -1.32
KTN1-222ENST00000555506 CEP41Q9BYV8 373 aa6.82□□□□□ -1.32
KTN1-222ENST00000555506 ZFYVE1Q9HBF4 777 aa6.82□□□□□ -1.32
KTN1-222ENST00000555506 AKAP2Q9Y2D5 859 aa6.82□□□□□ -1.32
KTN1-222ENST00000555506 INPP5FQ9Y2H2 1132 aa6.82□□□□□ -1.32
KTN1-222ENST00000555506 PREPP48147 710 aa6.81□□□□□ -1.32
KTN1-222ENST00000555506 FAAP100Q0VG06 881 aa6.81□□□□□ -1.32
KTN1-222ENST00000555506 CCDC85BQ15834 202 aaPredicted RBP6.81□□□□□ -1.32
KTN1-222ENST00000555506 SLC51AQ86UW1 340 aa6.81□□□□□ -1.32
KTN1-222ENST00000555506 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
KTN1-222ENST00000555506 TMPRSS13Q9BYE2 586 aa6.81□□□□□ -1.32
KTN1-222ENST00000555506 TANGO6Q9C0B7 1094 aa6.81□□□□□ -1.32
KTN1-222ENST00000555506 PPP1R1BQ9UD71 204 aaPredicted RBP6.81□□□□□ -1.32
KTN1-222ENST00000555506 MEGF11A6BM72 1044 aa6.8□□□□□ -1.32
KTN1-222ENST00000555506 ECEL1O95672 775 aa6.8□□□□□ -1.32
KTN1-222ENST00000555506 ZNF157P51786 506 aaPredicted RBP6.8□□□□□ -1.32
KTN1-222ENST00000555506 GMLQ99445 158 aa6.8□□□□□ -1.32
KTN1-222ENST00000555506 RSRP1Q9BUV0 290 aa6.8□□□□□ -1.32
KTN1-222ENST00000555506 COPRSQ9NQ92 184 aa6.8□□□□□ -1.32
KTN1-222ENST00000555506 KBTBD4Q9NVX7 518 aa6.8□□□□□ -1.32
KTN1-222ENST00000555506 RLBP1P12271 317 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 MAOBP27338 520 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 PWP1Q13610 501 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 ANKRD34AQ69YU3 496 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 UTP4Q969X6 686 aaKnown RBP6.79□□□□□ -1.32
KTN1-222ENST00000555506 PRKAG2Q9UGJ0 569 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 FBXO24O75426 580 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 GJA8P48165 433 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 POU4F3Q15319 338 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 UVSSAQ2YD98 709 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 RPS26P11Q5JNZ5 115 aaPredicted RBP6.79□□□□□ -1.32
KTN1-222ENST00000555506 EXOSC6Q5RKV6 272 aaKnown RBP6.79□□□□□ -1.32
KTN1-222ENST00000555506 FDX2Q6P4F2 183 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 TPTE2Q6XPS3 522 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 SV2BQ7L1I2 683 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 MYRFLQ96LU7 910 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 CEP44Q9C0F1 390 aa6.79□□□□□ -1.32
KTN1-222ENST00000555506 SART1O43290 800 aaKnown RBP6.78□□□□□ -1.32
KTN1-222ENST00000555506 TIAF1O95411 115 aa6.78□□□□□ -1.32
KTN1-222ENST00000555506 CYP11A1P05108 521 aa6.78□□□□□ -1.32
KTN1-222ENST00000555506 NUTM2GQ5VZR2 741 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms