RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 SLURP2P0DP57 97 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 CDC42EP5Q6NZY7 148 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 ARMC9Q7Z3E5 817 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 ZFPM1Q8IX07 1006 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 SIRT2Q8IXJ6 389 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 MRIQ9BWK5 157 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 CASP8AP2Q9UKL3 1982 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 GJA5P36382 358 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 MCAMP43121 646 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 TNNI3KQ59H18 835 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 CCDC8Q9H0W5 538 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 PPP2R3BQ9Y5P8 575 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 FPGT-TNNI3KV9GXZ4 949 aa12.34□□□□□ -0.43
HNRNPC-219ENST00000555309 SALL1Q9NSC2 1324 aa12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 TCP10Q12799 353 aa12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 GORABQ5T7V8 394 aa12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 R3HDMLQ9H3Y0 253 aa12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 SUGT1Q9Y2Z0 365 aa12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 NDUFB9Q9Y6M9 179 aa12.33□□□□□ -0.44
HNRNPC-219ENST00000555309 SEMA3EO15041 775 aa12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 PPP1R12BO60237 982 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 SPRYD7Q5W111 196 aa12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 SLC10A4Q96EP9 437 aa12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
HNRNPC-219ENST00000555309 APBB1O00213 710 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 MECOMQ03112 1051 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 MIGA2Q7L4E1 593 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 ELP3Q9H9T3 547 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 DBNLQ9UJU6 430 aaKnown RBP12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 MAST3O60307 1309 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 ARID4AP29374 1257 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 TNFAIP1Q13829 316 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 WNK4Q96J92 1243 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 IL1RAPL2Q9NP60 686 aa12.31□□□□□ -0.44
HNRNPC-219ENST00000555309 TNNI2P48788 182 aa12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 SH3BP5LQ7L8J4 393 aa12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 DZIP1Q86YF9 867 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 ZKSCAN4Q969J2 545 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 GPR108Q9NPR9 543 aa12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 MYH2Q9UKX2 1941 aa12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 OTOFQ9HC10 1997 aa12.3□□□□□ -0.44
HNRNPC-219ENST00000555309 BTDP43251 543 aa12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 ZAP70P43403 619 aa12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 TM4SF4P48230 202 aa12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 VGLL4Q14135 290 aa12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.29□□□□□ -0.442e-14■□□□□ 9.1
HNRNPC-219ENST00000555309 NSUN4Q96CB9 384 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 TMOD2Q9NZR1 351 aa12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 GAKO14976 1311 aa12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 PDS5AQ29RF7 1337 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-219ENST00000555309 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 ZBTB22O15209 634 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 CA12O43570 354 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 CYP2E1P05181 493 aaPredicted RBP12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 RGS3P49796 1198 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 TTC39AQ5SRH9 613 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 FAM83AQ86UY5 434 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 ANKRD13AQ8IZ07 590 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 FAM151AQ8WW52 585 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 PTPN18Q99952 460 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 PIH1D3Q9NQM4 214 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 RAI14Q9P0K7 980 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 AKAP11Q9UKA4 1901 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 WDHD1O75717 1129 aaPredicted RBP12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 INPP5BP32019 993 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 ANP32AP39687 249 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 RHBDL3P58872 404 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 PICALMQ13492 652 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 C8orf34Q49A92 452 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 FKBP1CQ5VVH2 108 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 OPTNQ96CV9 577 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 SNCAIPQ9Y6H5 919 aa12.28□□□□□ -0.44
HNRNPC-219ENST00000555309 MYO5AQ9Y4I1 1855 aaKnown RBP12.27□□□□□ -0.44
HNRNPC-219ENST00000555309 DDTLA6NHG4 134 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-219ENST00000555309 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.45
HNRNPC-219ENST00000555309 CCDC158Q5M9N0 1113 aa12.27□□□□□ -0.45
HNRNPC-219ENST00000555309 AACSQ86V21 672 aa12.27□□□□□ -0.45
HNRNPC-219ENST00000555309 SKAP1Q86WV1 359 aa12.27□□□□□ -0.45
HNRNPC-219ENST00000555309 ZGPATQ8N5A5 531 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-219ENST00000555309 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms