RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 DYNC1LI2O43237 492 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-208ENST00000554785 F13BP05160 661 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 PDE3BQ13370 1112 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 CITED4Q96RK1 184 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 SETDB2Q96T68 719 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 RBCK1Q9BYM8 510 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 CYP4F12Q9HCS2 524 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 FAM105AQ9NUU6 356 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 JAG2Q9Y219 1238 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 ACTL7BQ9Y614 415 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 NCANO14594 1321 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 TMEM238LA0A1B0GVL6 79 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 PRRG2O14669 202 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 GAS2O43903 313 aaKnown RBP2.69□□□□□ -1.98
PRPF39-208ENST00000554785 NFICP08651 508 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 ADH5P11766 374 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 RXRBP28702 533 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 DSC3Q14574 896 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 POU4F3Q15319 338 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 KRTAP19-4Q3LI73 84 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 AKAP4Q5JQC9 854 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 GATA6Q92908 595 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 ALKBH8Q96BT7 664 aaKnown RBP2.69□□□□□ -1.98
PRPF39-208ENST00000554785 CSRNP1Q96S65 589 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 ZC3H12CQ9C0D7 883 aaKnown RBP2.69□□□□□ -1.98
PRPF39-208ENST00000554785 PPP1R9AQ9ULJ8 1098 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 FAM95CA0A1B0GW59 222 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 GADD45BO75293 160 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 CYP11A1P05108 521 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 NFKBIBQ15653 356 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 AGBL5Q8NDL9 886 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 STK35Q8TDR2 534 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 WDR18Q9BV38 432 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 DNAJC25Q9H1X3 360 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 SEMA6CQ9H3T2 930 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 LGR6Q9HBX8 967 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 BIN2Q9UBW5 565 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 ANGEL1Q9UNK9 670 aaKnown RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 FAM170BA6NMN3 283 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 AOC2O75106 756 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 PRNPP04156 253 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 LIG1P18858 919 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 USP11P51784 963 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 FCGRTP55899 365 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 PRPF40BQ6NWY9 871 aaKnown RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 NXPE4Q6UWF7 544 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 MPRIPQ6WCQ1 1025 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 NFXL1Q6ZNB6 911 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 EZH1Q92800 747 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 DMRTB1Q96MA1 342 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 METTL22Q9BUU2 404 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 CCDC86Q9H6F5 360 aaKnown RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 WWC3Q9ULE0 1092 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 TREHO43280 583 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 ZNF862O60290 1169 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 RAB6AP20340 208 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 PTPN12Q05209 780 aaKnown RBP2.67□□□□□ -1.98
PRPF39-208ENST00000554785 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.67□□□□□ -1.982e-18■■■■■ 41.1
PRPF39-208ENST00000554785 TMCO4Q5TGY1 634 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 SEZ6L2Q6UXD5 910 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 DYMQ7RTS9 669 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 VSIG10LQ86VR7 867 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 CORO1BQ9BR76 489 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 BCO2Q9BYV7 579 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 GSX1Q9H4S2 264 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-208ENST00000554785 ACSS3Q9H6R3 686 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 C1GALT1Q9NS00 363 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 ATG3Q9NT62 314 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 PIM2Q9P1W9 311 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 PRKAG2Q9UGJ0 569 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 DCTN4Q9UJW0 460 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 CCDC9Q9Y3X0 531 aaKnown RBP2.67□□□□□ -1.98
PRPF39-208ENST00000554785 PNMA6FA0A0J9YX94 578 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 BIN1O00499 593 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 NEFLP07196 543 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 MAPK1P28482 360 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 MSMPQ1L6U9 139 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 SND1Q7KZF4 910 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ZNF765Q7L2R6 523 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 PDZD3Q86UT5 571 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 C3orf58Q8NDZ4 430 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 TBC1D32Q96NH3 1257 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 OSBPL7Q9BZF2 842 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 AP4E1Q9UPM8 1137 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 PCDHGC5Q9Y5F6 944 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 TMPRSS2O15393 492 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 C8AP07357 584 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ITGB5P18084 799 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ASPAP45381 313 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 PDE3AQ14432 1141 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 COL19A1Q14993 1142 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ENOX2Q16206 610 aaKnown RBP2.66□□□□□ -1.98
PRPF39-208ENST00000554785 OGFOD2Q6N063 350 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 DTHD1Q6ZMT9 781 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 CBLL1Q75N03 491 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ZAR1Q86SH2 424 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 RAD18Q9NS91 495 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 LEMD3Q9Y2U8 911 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 DAGLAQ9Y4D2 1042 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 U3KQE9 123 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms