RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 KLHDC4Q8TBB5 520 aa17.42■□□□□ 0.38
SPTLC2-202ENST00000554365 WRNIP1Q96S55 665 aa17.42■□□□□ 0.38
SPTLC2-202ENST00000554365 TMEM106CQ9BVX2 250 aa17.42■□□□□ 0.38
SPTLC2-202ENST00000554365 SPDYE5A6NIY4 337 aa17.41■□□□□ 0.38
SPTLC2-202ENST00000554365 WDHD1O75717 1129 aaPredicted RBP17.41■□□□□ 0.38
SPTLC2-202ENST00000554365 SLC9C1Q4G0N8 1177 aa17.41■□□□□ 0.38
SPTLC2-202ENST00000554365 VGLL2Q8N8G2 317 aa17.41■□□□□ 0.38
SPTLC2-202ENST00000554365 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
SPTLC2-202ENST00000554365 ZDHHC15Q96MV8 337 aa17.41■□□□□ 0.38
SPTLC2-202ENST00000554365 PTCH2Q9Y6C5 1203 aa17.41■□□□□ 0.38
SPTLC2-202ENST00000554365 SNCAIPQ9Y6H5 919 aa17.41■□□□□ 0.38
SPTLC2-202ENST00000554365 NEFLP07196 543 aa17.4■□□□□ 0.38
SPTLC2-202ENST00000554365 CETPP11597 493 aa17.4■□□□□ 0.38
SPTLC2-202ENST00000554365 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
SPTLC2-202ENST00000554365 ERO1BQ86YB8 467 aa17.4■□□□□ 0.38
SPTLC2-202ENST00000554365 ITPRIPQ8IWB1 547 aa17.4■□□□□ 0.38
SPTLC2-202ENST00000554365 ZNF333Q96JL9 665 aa17.4■□□□□ 0.38
SPTLC2-202ENST00000554365 MAST3O60307 1309 aa17.4■□□□□ 0.38
SPTLC2-202ENST00000554365 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
SPTLC2-202ENST00000554365 MYCP01106 439 aaPredicted RBP17.39■□□□□ 0.37
SPTLC2-202ENST00000554365 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.37
SPTLC2-202ENST00000554365 APOBEC3HQ6NTF7 200 aaKnown RBP17.39■□□□□ 0.37
SPTLC2-202ENST00000554365 FAM83AQ86UY5 434 aa17.39■□□□□ 0.37
SPTLC2-202ENST00000554365 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
SPTLC2-202ENST00000554365 CENPFP49454 3210 aa17.39■□□□□ 0.37
SPTLC2-202ENST00000554365 BTBD19C9JJ37 291 aa17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 IRF6O14896 467 aa17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 ZBTB7BO15156 539 aaPredicted RBP17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 ECM2O94769 699 aaPredicted RBP17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 SNAPC2Q13487 334 aa17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 KIF22Q14807 665 aa17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 SLC4A8Q2Y0W8 1093 aa17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 HABP4Q5JVS0 413 aaKnown RBP17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 DCAF15Q66K64 600 aa17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 MRIQ9BWK5 157 aa17.38■□□□□ 0.37
SPTLC2-202ENST00000554365 TLR2O60603 784 aa17.37■□□□□ 0.37
SPTLC2-202ENST00000554365 FKBP1CQ5VVH2 108 aa17.37■□□□□ 0.37
SPTLC2-202ENST00000554365 MIGA2Q7L4E1 593 aa17.37■□□□□ 0.37
SPTLC2-202ENST00000554365 ARHGAP39Q9C0H5 1083 aa17.37■□□□□ 0.37
SPTLC2-202ENST00000554365 DDX19BQ9UMR2 479 aa17.37■□□□□ 0.37
SPTLC2-202ENST00000554365 SUGT1Q9Y2Z0 365 aa17.37■□□□□ 0.37
SPTLC2-202ENST00000554365 SLC5A1P13866 664 aa17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 FGFR2P21802 821 aa17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 PPIL2Q13356 520 aa17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 HHIPL2Q6UWX4 724 aa17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 SH3TC2Q8TF17 1288 aa17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 MEIS3Q99687 375 aa17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 ZNF341Q9BYN7 854 aa17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 USP44Q9H0E7 712 aa17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 MKI67P46013 3256 aaKnown RBP17.36■□□□□ 0.37
SPTLC2-202ENST00000554365 LACTBP83111 547 aaPredicted RBP17.35■□□□□ 0.37
SPTLC2-202ENST00000554365 WDR66Q8TBY9 1149 aa17.35■□□□□ 0.37
SPTLC2-202ENST00000554365 ZCCHC17Q9NP64 241 aaKnown RBP17.35■□□□□ 0.37
SPTLC2-202ENST00000554365 ZBTB40Q9NUA8 1239 aa17.35■□□□□ 0.37
SPTLC2-202ENST00000554365 BRCA2P51587 3418 aa17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 ZSWIM8A7E2V4 1837 aa17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 EYA2O00167 538 aa17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 INPP5BP32019 993 aa17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 PPATQ06203 517 aa17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 TCP10Q12799 353 aa17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 FAM151AQ8WW52 585 aa17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 LPIN2Q92539 896 aa17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
SPTLC2-202ENST00000554365 DIXDC1Q155Q3 683 aa17.33■□□□□ 0.36
SPTLC2-202ENST00000554365 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
SPTLC2-202ENST00000554365 CPA4Q9UI42 421 aa17.33■□□□□ 0.36
SPTLC2-202ENST00000554365 GTF3C3Q9Y5Q9 886 aa17.33■□□□□ 0.36
SPTLC2-202ENST00000554365 KIAA0100Q14667 2235 aaKnown RBP17.33■□□□□ 0.36
SPTLC2-202ENST00000554365 RFX5P48382 616 aaPredicted RBP17.32■□□□□ 0.36
SPTLC2-202ENST00000554365 SIL1Q9H173 461 aa17.32■□□□□ 0.36
SPTLC2-202ENST00000554365 DAGLAQ9Y4D2 1042 aa17.32■□□□□ 0.36
SPTLC2-202ENST00000554365 PDHXO00330 501 aa17.31■□□□□ 0.36
SPTLC2-202ENST00000554365 GNRH1P01148 92 aa17.31■□□□□ 0.36
SPTLC2-202ENST00000554365 PRDX5P30044 214 aa17.31■□□□□ 0.36
SPTLC2-202ENST00000554365 NFIAQ12857 509 aa17.31■□□□□ 0.36
SPTLC2-202ENST00000554365 CDC42EP5Q6NZY7 148 aa17.31■□□□□ 0.36
SPTLC2-202ENST00000554365 C17orf99Q6UX52 265 aa17.31■□□□□ 0.36
SPTLC2-202ENST00000554365 ANKRD23Q86SG2 305 aa17.31■□□□□ 0.36
SPTLC2-202ENST00000554365 MYH13Q9UKX3 1938 aa17.3■□□□□ 0.36
SPTLC2-202ENST00000554365 LDHBP07195 334 aaKnown RBP17.3■□□□□ 0.36
SPTLC2-202ENST00000554365 PRMT2P55345 433 aa17.3■□□□□ 0.36
SPTLC2-202ENST00000554365 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
SPTLC2-202ENST00000554365 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
SPTLC2-202ENST00000554365 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
SPTLC2-202ENST00000554365 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
SPTLC2-202ENST00000554365 ZNF112Q9UJU3 913 aa17.3■□□□□ 0.36
SPTLC2-202ENST00000554365 FMNL1O95466 1100 aaPredicted RBP17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 GNAI3P08754 354 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 CTGFP29279 349 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 PSMC4P43686 418 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 AAMPQ13685 434 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 TRIM47Q96LD4 638 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 C1orf115Q9H7X2 142 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 KCNH4Q9UQ05 1017 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
SPTLC2-202ENST00000554365 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
SPTLC2-202ENST00000554365 RAET1EQ8TD07 263 aa17.28■□□□□ 0.36
SPTLC2-202ENST00000554365 CHMP4BQ9H444 224 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms