RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 CPLX3Q8WVH0 158 aa10.33□□□□□ -0.76
CCNK-203ENST00000553865 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.33□□□□□ -0.768e-8■■□□□ 11.5
CCNK-203ENST00000553865 EBAG9O00559 213 aa10.33□□□□□ -0.76
CCNK-203ENST00000553865 SYT1P21579 422 aa10.33□□□□□ -0.76
CCNK-203ENST00000553865 OTUD6BQ8N6M0 293 aa10.33□□□□□ -0.76
CCNK-203ENST00000553865 IQCGQ9H095 443 aaKnown RBP10.33□□□□□ -0.76
CCNK-203ENST00000553865 CCDC186Q7Z3E2 898 aa10.33□□□□□ -0.76
CCNK-203ENST00000553865 METTL22Q9BUU2 404 aaPredicted RBP10.33□□□□□ -0.76
CCNK-203ENST00000553865 DNAJC25Q9H1X3 360 aa10.33□□□□□ -0.76
CCNK-203ENST00000553865 PTPDC1A2A3K4 754 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 C6orf229H3BNL8 230 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 CCDC172P0C7W6 258 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 RPS6KB1P23443 525 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 ACTN2P35609 894 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 IFI16Q16666 785 aaKnown RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 KIAA0753Q2KHM9 967 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 MPHOSPH6Q99547 160 aaKnown RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 THRAP3Q9Y2W1 955 aaKnown RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 ARHGAP23Q9P227 1491 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 SKILP12757 684 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 TPD52P55327 224 aaPredicted RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 PPFIBP2Q8ND30 876 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 OTUD7AQ8TE49 926 aaPredicted RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 ERMNQ8TAM6 284 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 USP19O94966 1318 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 SGSM2O43147 1006 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 MAP3K9P80192 1104 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 APBB1IPQ7Z5R6 666 aaPredicted RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 CCDC77Q9BR77 488 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 TACC1O75410 805 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 NBPF6Q5VWK0 638 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 CEP120Q8N960 986 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 CCDC110Q8TBZ0 833 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 NBPF4Q96M43 638 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 LLPHQ9BRT6 129 aaKnown RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 BTG4Q9NY30 223 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 MKRN1Q9UHC7 482 aaKnown RBP10.32□□□□□ -0.76
CCNK-203ENST00000553865 SSX2IPQ9Y2D8 614 aa10.32□□□□□ -0.76
CCNK-203ENST00000553865 PRPF4BQ13523 1007 aaKnown RBP10.31□□□□□ -0.76
CCNK-203ENST00000553865 NAA25Q14CX7 972 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 AOPEPQ8N6M6 819 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 JADE2Q9NQC1 790 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 APOBRQ0VD83 1088 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 TMX1Q9H3N1 280 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 SNX14Q9Y5W7 946 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 SSH2Q76I76 1423 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 ARHGEF28Q8N1W1 1705 aaKnown RBP10.31□□□□□ -0.76
CCNK-203ENST00000553865 N4BP3O15049 544 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 RFC1P35251 1148 aaPredicted RBP10.31□□□□□ -0.76
CCNK-203ENST00000553865 PPM1FP49593 454 aaPredicted RBP10.31□□□□□ -0.76
CCNK-203ENST00000553865 NAA16Q6N069 864 aaPredicted RBP10.31□□□□□ -0.76
CCNK-203ENST00000553865 LUC7L2Q9Y383 392 aaKnown RBP10.31□□□□□ -0.76
CCNK-203ENST00000553865 PLEKHG2Q9H7P9 1386 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 CAPN2P17655 700 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 GNG11P61952 73 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 ST5P78524 1137 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 ZBTB16Q05516 673 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 MAP7D1Q3KQU3 841 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 TNNI3KQ59H18 835 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 ISM2Q6H9L7 571 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 NBPF5PQ86XG9 351 aaPredicted RBP10.31□□□□□ -0.76
CCNK-203ENST00000553865 FPGT-TNNI3KV9GXZ4 949 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 WDR17Q8IZU2 1322 aa10.31□□□□□ -0.76
CCNK-203ENST00000553865 SLC27A2O14975 620 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 IDEP14735 1019 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 ATP6V1AP38606 617 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 EIF4A1P60842 406 aaKnown RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 PLVAPQ9BX97 442 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 PHKG2P15735 406 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 USP37Q86T82 979 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 DZIP3Q86Y13 1208 aaKnown RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 EXOC1Q9NV70 894 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 SETD1BQ9UPS6 1966 aaKnown RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 SPATA31A3Q5VYP0 1347 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 MAGEB6P1A0A0J9YX57 407 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 TRIM75PA6NK02 468 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 IRS4O14654 1257 aaPredicted RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 NOP2P46087 812 aaKnown RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 ZNF445P59923 1031 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 FERMT2Q96AC1 680 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 CCDC114Q96M63 670 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 SRRTQ9BXP5 876 aaKnown RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 RASSF4Q9H2L5 321 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 RBM28Q9NW13 759 aaKnown RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 CTAGE15A4D2H0 777 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 EYA2O00167 538 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 TBCAO75347 108 aaKnown RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 CTAGE8P0CG41 777 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 LIG1P18858 919 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 RRAGBQ5VZM2 374 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 CTAGE6Q86UF2 777 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 CTAGE4Q8IX94 777 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 TRIM47Q96LD4 638 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 ZNF830Q96NB3 372 aaPredicted RBP10.3□□□□□ -0.76
CCNK-203ENST00000553865 ZNF853P0CG23 659 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 TSPY3P0CV98 308 aa10.3□□□□□ -0.76
CCNK-203ENST00000553865 TSPY8P0CW00 308 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms