RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 OTOFQ9HC10 1997 aa17.28■□□□□ 0.36
DDX54-210ENST00000552375 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 TBC1D8O95759 1140 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 ALDH1A1P00352 501 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 GJA5P36382 358 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
DDX54-210ENST00000552375 INHBEP58166 350 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 ATP8B2P98198 1209 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 G3BP1Q13283 466 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■□□□□ 9.8
DDX54-210ENST00000552375 VGLL4Q14135 290 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
DDX54-210ENST00000552375 HOOK2Q96ED9 719 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 ELP3Q9H9T3 547 aa17.27■□□□□ 0.36
DDX54-210ENST00000552375 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.27■□□□□ 0.36
DDX54-210ENST00000552375 GAKO14976 1311 aa17.26■□□□□ 0.35
DDX54-210ENST00000552375 MYH2Q9UKX2 1941 aa17.26■□□□□ 0.35
DDX54-210ENST00000552375 CDC42EP5Q6NZY7 148 aa17.26■□□□□ 0.35
DDX54-210ENST00000552375 CTU1Q7Z7A3 348 aaKnown RBP17.26■□□□□ 0.35
DDX54-210ENST00000552375 DZIP1Q86YF9 867 aaKnown RBP17.26■□□□□ 0.35
DDX54-210ENST00000552375 SSH3Q8TE77 659 aa17.26■□□□□ 0.35
DDX54-210ENST00000552375 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
DDX54-210ENST00000552375 OPTNQ96CV9 577 aa17.26■□□□□ 0.35
DDX54-210ENST00000552375 CSADQ9Y600 493 aa17.26■□□□□ 0.35
DDX54-210ENST00000552375 RFX7Q2KHR2 1363 aa17.26■□□□□ 0.35
DDX54-210ENST00000552375 GPR25O00155 361 aa17.25■□□□□ 0.35
DDX54-210ENST00000552375 IGF2BP3O00425 579 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDX54-210ENST00000552375 SURF6O75683 361 aaKnown RBP17.25■□□□□ 0.35
DDX54-210ENST00000552375 MAP3K9P80192 1104 aa17.25■□□□□ 0.35
DDX54-210ENST00000552375 NFIAQ12857 509 aa17.25■□□□□ 0.35
DDX54-210ENST00000552375 IFNL1Q8IU54 200 aa17.25■□□□□ 0.35
DDX54-210ENST00000552375 NEUROD6Q96NK8 337 aa17.25■□□□□ 0.35
DDX54-210ENST00000552375 CCDC85CA6NKD9 419 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
DDX54-210ENST00000552375 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 DCAF15Q66K64 600 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 SPTY2D1Q68D10 685 aaPredicted RBP17.24■□□□□ 0.35
DDX54-210ENST00000552375 FAM151AQ8WW52 585 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 WRNIP1Q96S55 665 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 ABCF2Q9UG63 623 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 LAMB1P07942 1786 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 MAST2Q6P0Q8 1798 aa17.24■□□□□ 0.35
DDX54-210ENST00000552375 TESPA1A2RU30 521 aaPredicted RBP17.23■□□□□ 0.35
DDX54-210ENST00000552375 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 GORABQ5T7V8 394 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 SLF2Q8IX21 1173 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 GPR108Q9NPR9 543 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 ZBTB40Q9NUA8 1239 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 USP40Q9NVE5 1235 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 HMG20BQ9P0W2 317 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 SNCAIPQ9Y6H5 919 aa17.23■□□□□ 0.35
DDX54-210ENST00000552375 MROH7-TTC4A0A0A0MT08 1334 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 APBB1O00213 710 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 TCP10Q12799 353 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 PI16Q6UXB8 463 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 SPATA5Q8NB90 893 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 ZNF341Q9BYN7 854 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 R3HDMLQ9H3Y0 253 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 FAM198AQ9UFP1 575 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
DDX54-210ENST00000552375 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
DDX54-210ENST00000552375 FKTNO75072 461 aa17.21■□□□□ 0.35
DDX54-210ENST00000552375 UQCRFS1P1P0C7P4 283 aa17.21■□□□□ 0.35
DDX54-210ENST00000552375 MCAMP43121 646 aa17.21■□□□□ 0.35
DDX54-210ENST00000552375 OTUD7BQ6GQQ9 843 aa17.21■□□□□ 0.35
DDX54-210ENST00000552375 ERICH6Q7L0X2 663 aa17.21■□□□□ 0.35
DDX54-210ENST00000552375 FAM163AQ96GL9 167 aaPredicted RBP17.21■□□□□ 0.35
DDX54-210ENST00000552375 MS4A4AQ96JQ5 239 aa17.21■□□□□ 0.35
DDX54-210ENST00000552375 IDI2Q9BXS1 227 aa17.21■□□□□ 0.35
DDX54-210ENST00000552375 NOP58Q9Y2X3 529 aaKnown RBP17.21■□□□□ 0.35
DDX54-210ENST00000552375 AK9Q5TCS8 1911 aa17.2■□□□□ 0.34
DDX54-210ENST00000552375 BTDP43251 543 aa17.2■□□□□ 0.34
DDX54-210ENST00000552375 GTF2A2P52657 109 aa17.2■□□□□ 0.34
DDX54-210ENST00000552375 MECOMQ03112 1051 aa17.2■□□□□ 0.34
DDX54-210ENST00000552375 BRI3BPQ8WY22 251 aa17.2■□□□□ 0.34
DDX54-210ENST00000552375 PTPN18Q99952 460 aa17.2■□□□□ 0.34
DDX54-210ENST00000552375 CCL15-CCL14A0A0B4J2E2 113 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 ENTPD3O75355 529 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
DDX54-210ENST00000552375 RGS3P49796 1198 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 CRHR2Q13324 411 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 PKN2Q16513 984 aaKnown RBP17.19■□□□□ 0.34
DDX54-210ENST00000552375 CCL15Q16663 113 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 MIGA2Q7L4E1 593 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 ERO1BQ86YB8 467 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 SIRT2Q8IXJ6 389 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 ZNF384Q8TF68 577 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 ZKSCAN4Q969J2 545 aaPredicted RBP17.19■□□□□ 0.34
DDX54-210ENST00000552375 CRBNQ96SW2 442 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 DBNDD2Q9BQY9 259 aa17.19■□□□□ 0.34
DDX54-210ENST00000552375 TLR7Q9NYK1 1049 aaKnown RBP17.19■□□□□ 0.34
DDX54-210ENST00000552375 INPP5BP32019 993 aa17.18■□□□□ 0.34
DDX54-210ENST00000552375 GSTO1P78417 241 aa17.18■□□□□ 0.34
DDX54-210ENST00000552375 PPIL2Q13356 520 aa17.18■□□□□ 0.34
DDX54-210ENST00000552375 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
DDX54-210ENST00000552375 CHMP4BQ9H444 224 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms