RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 EXOC6Q8TAG9 804 aa21.19■□□□□ 0.98
CDK4-208ENST00000551706 PRMT6Q96LA8 375 aaPredicted RBP21.19■□□□□ 0.98
CDK4-208ENST00000551706 ABCF2Q9UG63 623 aa21.19■□□□□ 0.98
CDK4-208ENST00000551706 MYH13Q9UKX3 1938 aa21.19■□□□□ 0.98
CDK4-208ENST00000551706 HDAC1Q13547 482 aaPredicted RBP21.18■□□□□ 0.98
CDK4-208ENST00000551706 ZDHHC15Q96MV8 337 aa21.18■□□□□ 0.98
CDK4-208ENST00000551706 IGSF3O75054 1194 aa21.17■□□□□ 0.98
CDK4-208ENST00000551706 FBXO46Q6PJ61 603 aaPredicted RBP21.17■□□□□ 0.98
CDK4-208ENST00000551706 ERICH6Q7L0X2 663 aa21.17■□□□□ 0.98
CDK4-208ENST00000551706 DZIP1Q86YF9 867 aaKnown RBP21.17■□□□□ 0.98
CDK4-208ENST00000551706 SLF2Q8IX21 1173 aa21.17■□□□□ 0.98
CDK4-208ENST00000551706 CDCA5Q96FF9 252 aa21.17■□□□□ 0.98
CDK4-208ENST00000551706 TBC1D8O95759 1140 aa21.16■□□□□ 0.98
CDK4-208ENST00000551706 PI16Q6UXB8 463 aa21.16■□□□□ 0.98
CDK4-208ENST00000551706 PCDHAC2Q9Y5I4 1007 aa21.16■□□□□ 0.98
CDK4-208ENST00000551706 SPDYE2Q495Y8 402 aa21.15■□□□□ 0.98
CDK4-208ENST00000551706 CLRN2A0PK11 232 aa21.14■□□□□ 0.97
CDK4-208ENST00000551706 FKBP1BP68106 108 aa21.14■□□□□ 0.97
CDK4-208ENST00000551706 TNFAIP1Q13829 316 aa21.14■□□□□ 0.97
CDK4-208ENST00000551706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.14■□□□□ 0.97
CDK4-208ENST00000551706 BCL11AQ9H165 835 aa21.14■□□□□ 0.97
CDK4-208ENST00000551706 RWDD1Q9H446 243 aaPredicted RBP21.14■□□□□ 0.97
CDK4-208ENST00000551706 SNRKQ9NRH2 765 aa21.14■□□□□ 0.97
CDK4-208ENST00000551706 LRP2BPQ9P2M1 347 aa21.14■□□□□ 0.97
CDK4-208ENST00000551706 PPP2R3BQ9Y5P8 575 aa21.14■□□□□ 0.97
CDK4-208ENST00000551706 GSTO1P78417 241 aa21.13■□□□□ 0.97
CDK4-208ENST00000551706 DIXDC1Q155Q3 683 aa21.13■□□□□ 0.97
CDK4-208ENST00000551706 APOBEC3HQ6NTF7 200 aaKnown RBP21.13■□□□□ 0.97
CDK4-208ENST00000551706 TDRD3Q9H7E2 651 aaKnown RBP21.13■□□□□ 0.97
CDK4-208ENST00000551706 VEZTQ9HBM0 779 aa21.13■□□□□ 0.97
CDK4-208ENST00000551706 TMOD2Q9NZR1 351 aa21.13■□□□□ 0.97
CDK4-208ENST00000551706 ZNF70Q9UC06 446 aaPredicted RBP21.13■□□□□ 0.97
CDK4-208ENST00000551706 ZBTB47Q9UFB7 747 aaPredicted RBP21.13■□□□□ 0.97
CDK4-208ENST00000551706 GPR25O00155 361 aa21.12■□□□□ 0.97
CDK4-208ENST00000551706 SMARCA5O60264 1052 aaPredicted RBP21.12■□□□□ 0.97
CDK4-208ENST00000551706 CYP2E1P05181 493 aaPredicted RBP21.12■□□□□ 0.97
CDK4-208ENST00000551706 ZAP70P43403 619 aa21.12■□□□□ 0.97
CDK4-208ENST00000551706 NOM1Q5C9Z4 860 aaKnown RBP21.12■□□□□ 0.97
CDK4-208ENST00000551706 TBC1D9Q6ZT07 1266 aa21.12■□□□□ 0.97
CDK4-208ENST00000551706 FAM163AQ96GL9 167 aaPredicted RBP21.12■□□□□ 0.97
CDK4-208ENST00000551706 DEFB129Q9H1M3 183 aa21.12■□□□□ 0.97
CDK4-208ENST00000551706 RAI14Q9P0K7 980 aa21.12■□□□□ 0.97
CDK4-208ENST00000551706 DAGLAQ9Y4D2 1042 aa21.12■□□□□ 0.97
CDK4-208ENST00000551706 GAKO14976 1311 aa21.11■□□□□ 0.97
CDK4-208ENST00000551706 PAPPA2Q9BXP8 1791 aa21.11■□□□□ 0.97
CDK4-208ENST00000551706 LDHCP07864 332 aa21.11■□□□□ 0.97
CDK4-208ENST00000551706 TNNI2P48788 182 aa21.11■□□□□ 0.97
CDK4-208ENST00000551706 MECOMQ03112 1051 aa21.11■□□□□ 0.97
CDK4-208ENST00000551706 GPATCH3Q96I76 525 aa21.11■□□□□ 0.97
CDK4-208ENST00000551706 AOX1Q06278 1338 aa21.1■□□□□ 0.97
CDK4-208ENST00000551706 MKI67P46013 3256 aaKnown RBP21.1■□□□□ 0.97
CDK4-208ENST00000551706 ATP5JP18859 108 aa21.1■□□□□ 0.97
CDK4-208ENST00000551706 NF2P35240 595 aa21.1■□□□□ 0.97
CDK4-208ENST00000551706 IRX6P78412 446 aaPredicted RBP21.1■□□□□ 0.97
CDK4-208ENST00000551706 FKBP1CQ5VVH2 108 aa21.1■□□□□ 0.97
CDK4-208ENST00000551706 NSUN4Q96CB9 384 aaKnown RBP21.1■□□□□ 0.97
CDK4-208ENST00000551706 SCAF8Q9UPN6 1271 aaKnown RBP21.1■□□□□ 0.97
CDK4-208ENST00000551706 TTF1Q15361 905 aaPredicted RBP21.09■□□□□ 0.97
CDK4-208ENST00000551706 TMED8Q6PL24 325 aaPredicted RBP21.09■□□□□ 0.97
CDK4-208ENST00000551706 MROH7-TTC4A0A0A0MT08 1334 aa21.08■□□□□ 0.97
CDK4-208ENST00000551706 TM4SF4P48230 202 aa21.08■□□□□ 0.97
CDK4-208ENST00000551706 FXR1P51114 621 aaKnown RBP eCLIP21.08■□□□□ 0.97
CDK4-208ENST00000551706 RASA3Q14644 834 aa21.08■□□□□ 0.97
CDK4-208ENST00000551706 ECHDC1Q9NTX5 307 aa21.08■□□□□ 0.97
CDK4-208ENST00000551706 ECM29Q5VYK3 1845 aa21.08■□□□□ 0.96
CDK4-208ENST00000551706 FKTNO75072 461 aa21.07■□□□□ 0.96
CDK4-208ENST00000551706 SUPT20HL1Q3ZLR7 823 aa21.07■□□□□ 0.96
CDK4-208ENST00000551706 ANKRD45Q5TZF3 282 aa21.07■□□□□ 0.96
CDK4-208ENST00000551706 NAA16Q6N069 864 aaPredicted RBP21.07■□□□□ 0.96
CDK4-208ENST00000551706 CDC42EP5Q6NZY7 148 aa21.07■□□□□ 0.96
CDK4-208ENST00000551706 FAM83AQ86UY5 434 aa21.07■□□□□ 0.96
CDK4-208ENST00000551706 PIH1D3Q9NQM4 214 aaKnown RBP21.07■□□□□ 0.96
CDK4-208ENST00000551706 GPR75-ASB3A0A0A6YYF3 556 aa21.06■□□□□ 0.96
CDK4-208ENST00000551706 TCP10L2B9ZVM9 353 aa21.06■□□□□ 0.96
CDK4-208ENST00000551706 IDH1O75874 414 aaKnown RBP21.06■□□□□ 0.96
CDK4-208ENST00000551706 MAP4K4O95819 1239 aaPredicted RBP21.06■□□□□ 0.96
CDK4-208ENST00000551706 MAP3K12Q12852 859 aa21.06■□□□□ 0.96
CDK4-208ENST00000551706 MOB2Q70IA6 237 aa21.06■□□□□ 0.96
CDK4-208ENST00000551706 SMC5Q8IY18 1101 aa21.06■□□□□ 0.96
CDK4-208ENST00000551706 NOL10Q9BSC4 688 aaKnown RBP21.06■□□□□ 0.96
CDK4-208ENST00000551706 USP40Q9NVE5 1235 aa21.06■□□□□ 0.96
CDK4-208ENST00000551706 UBE2Q2LH0YL09 131 aa21.05■□□□□ 0.96
CDK4-208ENST00000551706 BTDP43251 543 aa21.05■□□□□ 0.96
CDK4-208ENST00000551706 PRAMEF18Q5VWM3 479 aa21.05■□□□□ 0.96
CDK4-208ENST00000551706 ZNF384Q8TF68 577 aa21.05■□□□□ 0.96
CDK4-208ENST00000551706 DNAJC2Q99543 621 aaKnown RBP21.05■□□□□ 0.96
CDK4-208ENST00000551706 HAUS7Q99871 368 aa21.05■□□□□ 0.96
CDK4-208ENST00000551706 BOLA2Q9H3K6 86 aa21.05■□□□□ 0.96
CDK4-208ENST00000551706 BAG3O95817 575 aa21.04■□□□□ 0.96
CDK4-208ENST00000551706 CACNB3P54284 484 aa21.04■□□□□ 0.96
CDK4-208ENST00000551706 CFHR5Q9BXR6 569 aa21.04■□□□□ 0.96
CDK4-208ENST00000551706 ANTXR1Q9H6X2 564 aa21.04■□□□□ 0.96
CDK4-208ENST00000551706 NDUFB9Q9Y6M9 179 aa21.04■□□□□ 0.96
CDK4-208ENST00000551706 TTC41PQ6P2S7 1318 aa21.04■□□□□ 0.96
CDK4-208ENST00000551706 POTEFA5A3E0 1075 aa21.03■□□□□ 0.96
CDK4-208ENST00000551706 GOLIM4O00461 696 aa21.03■□□□□ 0.96
CDK4-208ENST00000551706 IGHDP01880 384 aa21.03■□□□□ 0.96
CDK4-208ENST00000551706 SREBF2Q12772 1141 aa21.03■□□□□ 0.96
CDK4-208ENST00000551706 PAG1Q9NWQ8 432 aa21.03■□□□□ 0.96
CDK4-208ENST00000551706 ERC2O15083 957 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms