RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 IL1R1P14778 569 aa17.51■□□□□ 0.39
SNRPF-203ENST00000551316 DZIP1LQ8IYY4 767 aaKnown RBP17.51■□□□□ 0.39
SNRPF-203ENST00000551316 CCDC191Q8NCU4 936 aa17.51■□□□□ 0.39
SNRPF-203ENST00000551316 DBF4Q9UBU7 674 aaPredicted RBP17.51■□□□□ 0.39
SNRPF-203ENST00000551316 TCF20Q9UGU0 1960 aaKnown RBP17.5■□□□□ 0.39
SNRPF-203ENST00000551316 DOCK2Q92608 1830 aa17.5■□□□□ 0.39
SNRPF-203ENST00000551316 TNPO2O14787 897 aaKnown RBP17.5■□□□□ 0.39
SNRPF-203ENST00000551316 COL6A1P12109 1028 aa17.5■□□□□ 0.39
SNRPF-203ENST00000551316 PPATQ06203 517 aa17.5■□□□□ 0.39
SNRPF-203ENST00000551316 CHRNDQ07001 517 aa17.5■□□□□ 0.39
SNRPF-203ENST00000551316 C9orf50Q5SZB4 431 aa17.5■□□□□ 0.39
SNRPF-203ENST00000551316 PARK7Q99497 189 aaKnown RBP17.5■□□□□ 0.39
SNRPF-203ENST00000551316 FKBP1AP62942 108 aaKnown RBP17.49■□□□□ 0.39
SNRPF-203ENST00000551316 OGDHLQ9ULD0 1010 aa17.49■□□□□ 0.39
SNRPF-203ENST00000551316 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
SNRPF-203ENST00000551316 HYPKQ9NX55 129 aa17.48■□□□□ 0.39
SNRPF-203ENST00000551316 TTF2Q9UNY4 1162 aaKnown RBP17.48■□□□□ 0.39
SNRPF-203ENST00000551316 MUC6Q6W4X9 2439 aa17.47■□□□□ 0.39
SNRPF-203ENST00000551316 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
SNRPF-203ENST00000551316 HSP90B1P14625 803 aaKnown RBP17.47■□□□□ 0.39
SNRPF-203ENST00000551316 GOLGA2Q08379 1002 aa17.47■□□□□ 0.39
SNRPF-203ENST00000551316 MIGA2Q7L4E1 593 aa17.47■□□□□ 0.39
SNRPF-203ENST00000551316 SNX27Q96L92 541 aa17.47■□□□□ 0.39
SNRPF-203ENST00000551316 DOCK1Q14185 1865 aa17.47■□□□□ 0.39
SNRPF-203ENST00000551316 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
SNRPF-203ENST00000551316 LOC285556D6RIA3 1793 aa17.46■□□□□ 0.39
SNRPF-203ENST00000551316 CHL1O00533 1208 aa17.46■□□□□ 0.39
SNRPF-203ENST00000551316 CAPN2P17655 700 aa17.46■□□□□ 0.39
SNRPF-203ENST00000551316 CRKP46108 304 aa17.46■□□□□ 0.39
SNRPF-203ENST00000551316 KCNJ4P48050 445 aa17.46■□□□□ 0.39
SNRPF-203ENST00000551316 RIPK4P57078 832 aa17.46■□□□□ 0.39
SNRPF-203ENST00000551316 SHHQ15465 462 aa17.46■□□□□ 0.39
SNRPF-203ENST00000551316 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
SNRPF-203ENST00000551316 RLFQ13129 1914 aa17.45■□□□□ 0.38
SNRPF-203ENST00000551316 HMGCRP04035 888 aa17.45■□□□□ 0.38
SNRPF-203ENST00000551316 NEFMP07197 916 aa17.45■□□□□ 0.38
SNRPF-203ENST00000551316 ITGA6P23229 1130 aa17.45■□□□□ 0.38
SNRPF-203ENST00000551316 IGHMBP2P38935 993 aaKnown RBP17.45■□□□□ 0.38
SNRPF-203ENST00000551316 MFSD14BQ5SR56 506 aa17.45■□□□□ 0.38
SNRPF-203ENST00000551316 C15orf52Q6ZUT6 534 aaKnown RBP17.45■□□□□ 0.38
SNRPF-203ENST00000551316 ADAMTS19Q8TE59 1207 aa17.45■□□□□ 0.38
SNRPF-203ENST00000551316 ANKRD2Q9GZV1 360 aa17.45■□□□□ 0.38
SNRPF-203ENST00000551316 CHD7Q9P2D1 2997 aa17.45■□□□□ 0.38
SNRPF-203ENST00000551316 TRIB2Q92519 343 aa17.44■□□□□ 0.38
SNRPF-203ENST00000551316 NECAB3Q96P71 396 aaPredicted RBP17.44■□□□□ 0.38
SNRPF-203ENST00000551316 METTL22Q9BUU2 404 aaPredicted RBP17.44■□□□□ 0.38
SNRPF-203ENST00000551316 CACNA1AO00555 2505 aa17.44■□□□□ 0.38
SNRPF-203ENST00000551316 RPAP1Q9BWH6 1393 aaPredicted RBP17.43■□□□□ 0.38
SNRPF-203ENST00000551316 TNNI2P48788 182 aa17.43■□□□□ 0.38
SNRPF-203ENST00000551316 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
SNRPF-203ENST00000551316 CWF19L2Q2TBE0 894 aaKnown RBP17.42■□□□□ 0.38
SNRPF-203ENST00000551316 DUSP27Q5VZP5 1158 aa17.42■□□□□ 0.38
SNRPF-203ENST00000551316 ZNF804AQ7Z570 1209 aa17.42■□□□□ 0.38
SNRPF-203ENST00000551316 HMX1Q9NP08 348 aaPredicted RBP17.42■□□□□ 0.38
SNRPF-203ENST00000551316 HOXB7P09629 217 aa17.41■□□□□ 0.38
SNRPF-203ENST00000551316 GRIN2CQ14957 1233 aa17.41■□□□□ 0.38
SNRPF-203ENST00000551316 ANKRD13CQ8N6S4 541 aa17.41■□□□□ 0.38
SNRPF-203ENST00000551316 ZNF341Q9BYN7 854 aa17.41■□□□□ 0.38
SNRPF-203ENST00000551316 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.41■□□□□ 0.38
SNRPF-203ENST00000551316 MAP3K21Q5TCX8 1036 aa17.4■□□□□ 0.38
SNRPF-203ENST00000551316 UBE3BQ7Z3V4 1068 aa17.4■□□□□ 0.38
SNRPF-203ENST00000551316 UHRF1Q96T88 793 aaPredicted RBP17.4■□□□□ 0.38
SNRPF-203ENST00000551316 ZNF112Q9UJU3 913 aa17.4■□□□□ 0.38
SNRPF-203ENST00000551316 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
SNRPF-203ENST00000551316 A0A0G2JLL6 359 aaPredicted RBP17.39■□□□□ 0.37
SNRPF-203ENST00000551316 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.37
SNRPF-203ENST00000551316 PRRT2Q7Z6L0 340 aaPredicted RBP17.39■□□□□ 0.37
SNRPF-203ENST00000551316 MPHOSPH8Q99549 860 aa17.39■□□□□ 0.37
SNRPF-203ENST00000551316 GJD2Q9UKL4 321 aa17.39■□□□□ 0.37
SNRPF-203ENST00000551316 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
SNRPF-203ENST00000551316 ATAD5Q96QE3 1844 aa17.38■□□□□ 0.37
SNRPF-203ENST00000551316 SLURP2P0DP57 97 aa17.38■□□□□ 0.37
SNRPF-203ENST00000551316 PRKAR2AP13861 404 aaKnown RBP17.38■□□□□ 0.37
SNRPF-203ENST00000551316 NOL9Q5SY16 702 aaKnown RBP17.38■□□□□ 0.37
SNRPF-203ENST00000551316 GADL1Q6ZQY3 521 aa17.38■□□□□ 0.37
SNRPF-203ENST00000551316 WDFY4Q6ZS81 3184 aa17.37■□□□□ 0.37
SNRPF-203ENST00000551316 GYG1P46976 350 aa17.37■□□□□ 0.37
SNRPF-203ENST00000551316 CASP7P55210 303 aa17.37■□□□□ 0.37
SNRPF-203ENST00000551316 SMAD3P84022 425 aaKnown RBP17.37■□□□□ 0.37
SNRPF-203ENST00000551316 LHX8Q68G74 356 aa17.37■□□□□ 0.37
SNRPF-203ENST00000551316 CCDC84Q86UT8 332 aaPredicted RBP17.37■□□□□ 0.37
SNRPF-203ENST00000551316 ALYREFQ86V81 257 aaKnown RBP17.37■□□□□ 0.37
SNRPF-203ENST00000551316 TDRD7Q8NHU6 1098 aaKnown RBP17.37■□□□□ 0.37
SNRPF-203ENST00000551316 COA7Q96BR5 231 aa17.37■□□□□ 0.37
SNRPF-203ENST00000551316 ASB2Q96Q27 587 aa17.37■□□□□ 0.37
SNRPF-203ENST00000551316 LBHD1Q9BQE6 289 aaPredicted RBP17.37■□□□□ 0.37
SNRPF-203ENST00000551316 ATRNL1Q5VV63 1379 aa17.37■□□□□ 0.37
SNRPF-203ENST00000551316 PLXNA1Q9UIW2 1896 aa17.37■□□□□ 0.37
SNRPF-203ENST00000551316 CCND3P30281 292 aaPredicted RBP17.36■□□□□ 0.37
SNRPF-203ENST00000551316 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
SNRPF-203ENST00000551316 FAM83AQ86UY5 434 aa17.36■□□□□ 0.37
SNRPF-203ENST00000551316 PPM1EQ8WY54 764 aa17.36■□□□□ 0.37
SNRPF-203ENST00000551316 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
SNRPF-203ENST00000551316 GBF1Q92538 1859 aa17.35■□□□□ 0.37
SNRPF-203ENST00000551316 NEURL1BA8MQ27 555 aa17.35■□□□□ 0.37
SNRPF-203ENST00000551316 PEX10O60683 326 aa17.35■□□□□ 0.37
SNRPF-203ENST00000551316 ATN1P54259 1190 aaPredicted RBP17.35■□□□□ 0.37
SNRPF-203ENST00000551316 TREML2Q5T2D2 321 aa17.35■□□□□ 0.37
SNRPF-203ENST00000551316 APOBEC3HQ6NTF7 200 aaKnown RBP17.35■□□□□ 0.37
SNRPF-203ENST00000551316 POTEEQ6S8J3 1075 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms