RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CDC42EP5Q6NZY7 148 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 FAM83AQ86UY5 434 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 ARHGAP39Q9C0H5 1083 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 CSADQ9Y600 493 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 PTPRFP10586 1907 aa14.44□□□□□ -0.1
PRPF40B-212ENST00000551111 PHIPQ8WWQ0 1821 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 DOCK3Q8IZD9 2030 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 ECM2O94769 699 aaPredicted RBP14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 GTF2A2P52657 109 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 TAF1CQ15572 869 aaPredicted RBP14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 ATP2B3Q16720 1220 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 ERO1AQ96HE7 468 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 EFCC1Q9HA90 598 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 FAM198AQ9UFP1 575 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 SUGT1Q9Y2Z0 365 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 MGAMO43451 1857 aa14.43□□□□□ -0.1
PRPF40B-212ENST00000551111 BTBD19C9JJ37 291 aa14.42□□□□□ -0.1
PRPF40B-212ENST00000551111 RARSP54136 660 aaKnown RBP14.42□□□□□ -0.1
PRPF40B-212ENST00000551111 TIMM10P62072 90 aa14.42□□□□□ -0.1
PRPF40B-212ENST00000551111 FKBP1CQ5VVH2 108 aa14.42□□□□□ -0.1
PRPF40B-212ENST00000551111 ERO1BQ86YB8 467 aa14.42□□□□□ -0.1
PRPF40B-212ENST00000551111 WDR66Q8TBY9 1149 aa14.42□□□□□ -0.1
PRPF40B-212ENST00000551111 TMOD2Q9NZR1 351 aa14.42□□□□□ -0.1
PRPF40B-212ENST00000551111 CEP126Q9P2H0 1117 aa14.42□□□□□ -0.1
PRPF40B-212ENST00000551111 MAST3O60307 1309 aa14.41□□□□□ -0.1
PRPF40B-212ENST00000551111 CIAO1O76071 339 aa14.41□□□□□ -0.1
PRPF40B-212ENST00000551111 EN2P19622 333 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-212ENST00000551111 FAM151AQ8WW52 585 aa14.41□□□□□ -0.1
PRPF40B-212ENST00000551111 PTCH2Q9Y6C5 1203 aa14.41□□□□□ -0.1
PRPF40B-212ENST00000551111 RPAP1Q9BWH6 1393 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-212ENST00000551111 CTGFP29279 349 aa14.4□□□□□ -0.1
PRPF40B-212ENST00000551111 PRPF38BQ5VTL8 546 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-212ENST00000551111 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-212ENST00000551111 ARMC5Q96C12 935 aa14.4□□□□□ -0.1
PRPF40B-212ENST00000551111 ZFYVE28Q9HCC9 887 aa14.4□□□□□ -0.1
PRPF40B-212ENST00000551111 COPRSQ9NQ92 184 aa14.4□□□□□ -0.1
PRPF40B-212ENST00000551111 USP40Q9NVE5 1235 aa14.4□□□□□ -0.1
PRPF40B-212ENST00000551111 MYCP01106 439 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 LDHBP07195 334 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 IL15P40933 162 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 PPIL2Q13356 520 aa14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 MOGSQ13724 837 aa14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 CCDC102BQ68D86 513 aa14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 SH3BP5LQ7L8J4 393 aa14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 ZNF341Q9BYN7 854 aa14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 ZNF112Q9UJU3 913 aa14.39□□□□□ -0.11
PRPF40B-212ENST00000551111 CDK5RAP2Q96SN8 1893 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 TLR2O60603 784 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 CETPP11597 493 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 TFCP2Q12800 502 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 SNAPC2Q13487 334 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 RASGRF1Q13972 1273 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 DCAF15Q66K64 600 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 ZNF384Q8TF68 577 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 API5Q9BZZ5 524 aaKnown RBP14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 ATAD5Q96QE3 1844 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 DOCK1Q14185 1865 aa14.38□□□□□ -0.11
PRPF40B-212ENST00000551111 CEP290O15078 2479 aa14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 ATRNL1Q5VV63 1379 aa14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 BCAR3O75815 825 aa14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 CT47B1P0C2W7 299 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 PI16Q6UXB8 463 aa14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 ZNF333Q96JL9 665 aa14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 DDX4Q9NQI0 724 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 CPA4Q9UI42 421 aa14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 DENND2AQ9ULE3 1009 aa14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 SALL1Q9NSC2 1324 aa14.37□□□□□ -0.11
PRPF40B-212ENST00000551111 RFX7Q2KHR2 1363 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 A0A1B0GUL7 405 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 DDTLA6NHG4 134 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 PHF20L1A8MW92 1017 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 RGS3P49796 1198 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 LACTBP83111 547 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 PPATQ06203 517 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 C17orf99Q6UX52 265 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 SH3TC2Q8TF17 1288 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 XAGE2Q96GT9 111 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 GNL3LQ9NVN8 582 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 KCNH4Q9UQ05 1017 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 GAKO14976 1311 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 ADGRA2Q96PE1 1338 aa14.36□□□□□ -0.11
PRPF40B-212ENST00000551111 PNMA6EA0A0J9YXQ4 647 aa14.35□□□□□ -0.11
PRPF40B-212ENST00000551111 SRGAP3O43295 1099 aa14.35□□□□□ -0.11
PRPF40B-212ENST00000551111 WDHD1O75717 1129 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-212ENST00000551111 TRIM27P14373 513 aa14.35□□□□□ -0.11
PRPF40B-212ENST00000551111 GPAT2Q6NUI2 795 aa14.35□□□□□ -0.11
PRPF40B-212ENST00000551111 HOOK2Q96ED9 719 aa14.35□□□□□ -0.11
PRPF40B-212ENST00000551111 ABCF2Q9UG63 623 aa14.35□□□□□ -0.11
PRPF40B-212ENST00000551111 SIPA1L1O43166 1804 aa14.34□□□□□ -0.11
PRPF40B-212ENST00000551111 PDHXO00330 501 aa14.34□□□□□ -0.11
PRPF40B-212ENST00000551111 SLC9C1Q4G0N8 1177 aa14.34□□□□□ -0.11
PRPF40B-212ENST00000551111 NOL9Q5SY16 702 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-212ENST00000551111 TBC1D9Q6ZT07 1266 aa14.34□□□□□ -0.11
PRPF40B-212ENST00000551111 CCDC84Q86UT8 332 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-212ENST00000551111 ARHGAP45Q92619 1136 aa14.34□□□□□ -0.11
PRPF40B-212ENST00000551111 CLUAP1Q96AJ1 413 aa14.34□□□□□ -0.11
PRPF40B-212ENST00000551111 TRIM47Q96LD4 638 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms