RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
NPAS3-209ENST00000551008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.13■□□□□ 0.17
NPAS3-209ENST00000551008 GNL3LQ9NVN8 582 aaKnown RBP16.13■□□□□ 0.17
NPAS3-209ENST00000551008 HMG20BQ9P0W2 317 aa16.13■□□□□ 0.17
NPAS3-209ENST00000551008 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
NPAS3-209ENST00000551008 ARID4AP29374 1257 aaPredicted RBP16.12■□□□□ 0.17
NPAS3-209ENST00000551008 MVPQ14764 893 aaKnown RBP16.12■□□□□ 0.17
NPAS3-209ENST00000551008 CEP85Q6P2H3 762 aa16.12■□□□□ 0.17
NPAS3-209ENST00000551008 SLC10A4Q96EP9 437 aa16.12■□□□□ 0.17
NPAS3-209ENST00000551008 MCOLN1Q9GZU1 580 aa16.12■□□□□ 0.17
NPAS3-209ENST00000551008 FAM198AQ9UFP1 575 aa16.12■□□□□ 0.17
NPAS3-209ENST00000551008 AKAP2Q9Y2D5 859 aa16.12■□□□□ 0.17
NPAS3-209ENST00000551008 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
NPAS3-209ENST00000551008 SIPA1L1O43166 1804 aa16.12■□□□□ 0.17
NPAS3-209ENST00000551008 ATRNL1Q5VV63 1379 aa16.12■□□□□ 0.17
NPAS3-209ENST00000551008 FOCADQ5VW36 1801 aa16.11■□□□□ 0.17
NPAS3-209ENST00000551008 UNCXA6NJT0 531 aa16.11■□□□□ 0.17
NPAS3-209ENST00000551008 TBC1D8O95759 1140 aa16.11■□□□□ 0.17
NPAS3-209ENST00000551008 ZBTB48P10074 688 aaPredicted RBP16.11■□□□□ 0.17
NPAS3-209ENST00000551008 MCAMP43121 646 aa16.11■□□□□ 0.17
NPAS3-209ENST00000551008 IREB2P48200 963 aaKnown RBP16.11■□□□□ 0.17
NPAS3-209ENST00000551008 VGLL4Q14135 290 aa16.11■□□□□ 0.17
NPAS3-209ENST00000551008 ZFPM1Q8IX07 1006 aa16.11■□□□□ 0.17
NPAS3-209ENST00000551008 ANKRD13AQ8IZ07 590 aa16.11■□□□□ 0.17
NPAS3-209ENST00000551008 CFHR5Q9BXR6 569 aa16.11■□□□□ 0.17
NPAS3-209ENST00000551008 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
NPAS3-209ENST00000551008 HTTP42858 3142 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 PHIPQ8WWQ0 1821 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 PTPRFP10586 1907 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 TNNI2P48788 182 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
NPAS3-209ENST00000551008 TNNI3KQ59H18 835 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 MS4A4AQ96JQ5 239 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 NEUROD6Q96NK8 337 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 ELP3Q9H9T3 547 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 GPR108Q9NPR9 543 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 SNCAIPQ9Y6H5 919 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 FPGT-TNNI3KV9GXZ4 949 aa16.1■□□□□ 0.17
NPAS3-209ENST00000551008 SREBF2Q12772 1141 aa16.09■□□□□ 0.17
NPAS3-209ENST00000551008 TBC1D9Q6ZT07 1266 aa16.09■□□□□ 0.17
NPAS3-209ENST00000551008 FAM151AQ8WW52 585 aa16.09■□□□□ 0.17
NPAS3-209ENST00000551008 PTPN18Q99952 460 aa16.09■□□□□ 0.17
NPAS3-209ENST00000551008 TLR7Q9NYK1 1049 aaKnown RBP16.09■□□□□ 0.17
NPAS3-209ENST00000551008 ZSWIM8A7E2V4 1837 aa16.08■□□□□ 0.17
NPAS3-209ENST00000551008 TESPA1A2RU30 521 aaPredicted RBP16.08■□□□□ 0.16
NPAS3-209ENST00000551008 MANSC4A6NHS7 340 aaPredicted RBP16.08■□□□□ 0.16
NPAS3-209ENST00000551008 SURF6O75683 361 aaKnown RBP16.08■□□□□ 0.16
NPAS3-209ENST00000551008 RHBDL3P58872 404 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 MECOMQ03112 1051 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 TCP10Q12799 353 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 DGKZQ13574 1117 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 SH3BP5LQ7L8J4 393 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 IFNL1Q8IU54 200 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 SPATA5Q8NB90 893 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 ZNF296Q8WUU4 475 aaPredicted RBP16.08■□□□□ 0.16
NPAS3-209ENST00000551008 OPTNQ96CV9 577 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 FAM163AQ96GL9 167 aaPredicted RBP16.08■□□□□ 0.16
NPAS3-209ENST00000551008 DDX4Q9NQI0 724 aaKnown RBP16.08■□□□□ 0.16
NPAS3-209ENST00000551008 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 ABCF2Q9UG63 623 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 DOCK1Q14185 1865 aa16.08■□□□□ 0.16
NPAS3-209ENST00000551008 WDHD1O75717 1129 aaPredicted RBP16.07■□□□□ 0.16
NPAS3-209ENST00000551008 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
NPAS3-209ENST00000551008 MAP3K9P80192 1104 aa16.07■□□□□ 0.16
NPAS3-209ENST00000551008 NOM1Q5C9Z4 860 aaKnown RBP16.07■□□□□ 0.16
NPAS3-209ENST00000551008 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
NPAS3-209ENST00000551008 ZGPATQ8N5A5 531 aaKnown RBP16.07■□□□□ 0.16
NPAS3-209ENST00000551008 USP40Q9NVE5 1235 aa16.07■□□□□ 0.16
NPAS3-209ENST00000551008 DBNLQ9UJU6 430 aaKnown RBP16.07■□□□□ 0.16
NPAS3-209ENST00000551008 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
NPAS3-209ENST00000551008 MROH7-TTC4A0A0A0MT08 1334 aa16.07■□□□□ 0.16
NPAS3-209ENST00000551008 ATAD5Q96QE3 1844 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 SPDYE5A6NIY4 337 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 GPR25O00155 361 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 INPP5BP32019 993 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 RGS3P49796 1198 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 CAP1Q01518 475 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 C20orf194Q5TEA3 1177 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 MIGA2Q7L4E1 593 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 BRI3BPQ8WY22 251 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 ZKSCAN4Q969J2 545 aaPredicted RBP16.06■□□□□ 0.16
NPAS3-209ENST00000551008 NSUN4Q96CB9 384 aaKnown RBP16.06■□□□□ 0.16
NPAS3-209ENST00000551008 EAF2Q96CJ1 260 aaPredicted RBP16.06■□□□□ 0.16
NPAS3-209ENST00000551008 WRNIP1Q96S55 665 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 IDI2Q9BXS1 227 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 ZBTB40Q9NUA8 1239 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 ZNF112Q9UJU3 913 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
NPAS3-209ENST00000551008 GPR75-ASB3A0A0A6YYF3 556 aa16.05■□□□□ 0.16
NPAS3-209ENST00000551008 BTDP43251 543 aa16.05■□□□□ 0.16
NPAS3-209ENST00000551008 DZIP1Q86YF9 867 aaKnown RBP16.05■□□□□ 0.16
NPAS3-209ENST00000551008 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
NPAS3-209ENST00000551008 EXOC6BQ9Y2D4 811 aa16.05■□□□□ 0.16
NPAS3-209ENST00000551008 UQCRFS1P1P0C7P4 283 aa16.04■□□□□ 0.16
NPAS3-209ENST00000551008 INHBEP58166 350 aa16.04■□□□□ 0.16
NPAS3-209ENST00000551008 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
NPAS3-209ENST00000551008 OTUD5Q96G74 571 aa16.04■□□□□ 0.16
NPAS3-209ENST00000551008 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
NPAS3-209ENST00000551008 ENTPD3O75355 529 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms