RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 FAM35AQ86V20 835 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 RHOVQ96L33 236 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 POP1Q99575 1024 aaKnown RBP7.72□□□□□ -1.17
CPSF6-206ENST00000550987 MIR1-1HGQ9H1L0 117 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 PIF1Q9H611 641 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 ZNF408Q9H9D4 720 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 DACH1Q9UI36 760 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 UTRNP46939 3433 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 RUSC2Q8N2Y8 1516 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 ANKRD62A6NC57 917 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 GPR25O00155 361 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 TLR3O15455 904 aaKnown RBP7.71□□□□□ -1.18
CPSF6-206ENST00000550987 GREM1O60565 184 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 PTPRAP18433 802 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 TFE3P19532 575 aaPredicted RBP7.71□□□□□ -1.18
CPSF6-206ENST00000550987 ETFBP38117 255 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 LAPTM4AQ15012 233 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 SEZ6Q53EL9 994 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 NBPF6Q5VWK0 638 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 DDX54Q8TDD1 881 aaKnown RBP7.71□□□□□ -1.18
CPSF6-206ENST00000550987 NBPF4Q96M43 638 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 CRBNQ96SW2 442 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 MUC3BQ9H195 1237 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 CLEC4MQ9H2X3 399 aaPredicted RBP7.71□□□□□ -1.18
CPSF6-206ENST00000550987 CBX8Q9HC52 389 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 HCN2Q9UL51 889 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.18
CPSF6-206ENST00000550987 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 ARHGEF12Q9NZN5 1544 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 K7ELQ4 463 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-206ENST00000550987 PAGE1O75459 146 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 CLSTN1O94985 981 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 CDK11BP21127 795 aaKnown RBP7.7□□□□□ -1.18
CPSF6-206ENST00000550987 SOX9P48436 509 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 PCBP4P57723 403 aaKnown RBP7.7□□□□□ -1.18
CPSF6-206ENST00000550987 PCDH1Q08174 1060 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 FAAP100Q0VG06 881 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 LRRC14Q15048 493 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 ELMSAN1Q6PJG2 1045 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 FAM196AQ6ZSG2 479 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 SV2AQ7L0J3 742 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 VWA5B2Q8N398 1253 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 PLD4Q96BZ4 506 aa7.7□□□□□ -1.18
CPSF6-206ENST00000550987 SRRTQ9BXP5 876 aaKnown RBP7.7□□□□□ -1.18
CPSF6-206ENST00000550987 CDK11AQ9UQ88 783 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-206ENST00000550987 BCL9LQ86UU0 1499 aa7.69□□□□□ -1.18
CPSF6-206ENST00000550987 BPNT1O95861 308 aa7.69□□□□□ -1.18
CPSF6-206ENST00000550987 BNC2Q6ZN30 1099 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-206ENST00000550987 TRIM42Q8IWZ5 723 aa7.69□□□□□ -1.18
CPSF6-206ENST00000550987 LACRTQ9GZZ8 138 aa7.69□□□□□ -1.18
CPSF6-206ENST00000550987 KCNQ5Q9NR82 932 aa7.69□□□□□ -1.18
CPSF6-206ENST00000550987 CYP8B1Q9UNU6 501 aa7.69□□□□□ -1.18
CPSF6-206ENST00000550987 TNS2Q63HR2 1409 aa7.69□□□□□ -1.18
CPSF6-206ENST00000550987 FGD5Q6ZNL6 1462 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 SIN3BO75182 1162 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 F13A1P00488 732 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 GARTP22102 1010 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 NME2P22392 152 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 CABP4P57796 275 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 CWF19L2Q2TBE0 894 aaKnown RBP7.68□□□□□ -1.18
CPSF6-206ENST00000550987 ZNF468Q5VIY5 522 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-206ENST00000550987 SDE2Q6IQ49 451 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 CCDC84Q86UT8 332 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-206ENST00000550987 FERD3LQ96RJ6 166 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 SRPK1Q96SB4 655 aaKnown RBP7.68□□□□□ -1.18
CPSF6-206ENST00000550987 EMILIN2Q9BXX0 1053 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 SIRPGQ9P1W8 387 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 PCDHB5Q9Y5E4 795 aa7.68□□□□□ -1.18
CPSF6-206ENST00000550987 ZCCHC11Q5TAX3 1644 aaKnown RBP7.67□□□□□ -1.18
CPSF6-206ENST00000550987 CRKP46108 304 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 ZNF165P49910 485 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 EIF6P56537 245 aaKnown RBP7.67□□□□□ -1.18
CPSF6-206ENST00000550987 MLECQ14165 292 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 CCDC81Q6ZN84 652 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 SLITRK4Q8IW52 837 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 GATAD2BQ8WXI9 593 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 TRIM47Q96LD4 638 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 SMG9Q9H0W8 520 aaKnown RBP7.67□□□□□ -1.18
CPSF6-206ENST00000550987 PPT2Q9UMR5 302 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 CAMTA1Q9Y6Y1 1673 aa7.67□□□□□ -1.18
CPSF6-206ENST00000550987 CCDC85CA6NKD9 419 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 RAPGEF3O95398 923 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 MX2P20592 715 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 ARNTP27540 789 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 ZNF423Q2M1K9 1284 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 PERM1Q5SV97 790 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 GDF6Q6KF10 455 aaPredicted RBP7.66□□□□□ -1.18
CPSF6-206ENST00000550987 ZNF746Q6NUN9 644 aaPredicted RBP7.66□□□□□ -1.18
CPSF6-206ENST00000550987 LLGL2Q6P1M3 1020 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 SULF2Q8IWU5 870 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 FBXO27Q8NI29 283 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 PRKAG3Q9UGI9 489 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 SLC6A14Q9UN76 642 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 NSFL1CQ9UNZ2 370 aaKnown RBP7.66□□□□□ -1.18
CPSF6-206ENST00000550987 SHANK2Q9UPX8 1470 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 WDR7Q9Y4E6 1490 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 LRP6O75581 1613 aa7.66□□□□□ -1.18
CPSF6-206ENST00000550987 B3GALT4O96024 378 aa7.65□□□□□ -1.18
CPSF6-206ENST00000550987 BMP6P22004 513 aa7.65□□□□□ -1.18
CPSF6-206ENST00000550987 RAB33AQ14088 237 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms