RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 LINC00301Q8NCQ3 95 aa21.61■■□□□ 1.05
PRPF40B-208ENST00000548436 AIFM3Q96NN9 605 aa21.61■■□□□ 1.05
PRPF40B-208ENST00000548436 CDC5LQ99459 802 aaKnown RBP21.61■■□□□ 1.05
PRPF40B-208ENST00000548436 IQSEC3Q9UPP2 1182 aaPredicted RBP21.61■■□□□ 1.05
PRPF40B-208ENST00000548436 FAM160A1Q05DH4 1040 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 MYSM1Q5VVJ2 828 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 SMIM5Q71RC9 77 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 MICU3Q86XE3 530 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 FSIP1Q8NA03 581 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 PNPLA7Q6ZV29 1317 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 KIF23Q02241 960 aaPredicted RBP21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 KIAA2012Q0VF49 1180 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 TMEM67Q5HYA8 995 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 BRAPQ7Z569 592 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 SGMS1Q86VZ5 419 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 CCDC144CPQ8IYA2 1237 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 LRP2BPQ9P2M1 347 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 SLC4A4Q9Y6R1 1079 aa21.6■■□□□ 1.05
PRPF40B-208ENST00000548436 CTAGE5O15320 804 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 ZNF165P49910 485 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 AKNAD1Q5T1N1 836 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 ADALQ6DHV7 355 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 PTF1AQ7RTS3 328 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 MIGA1Q8NAN2 632 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 FAM217BQ9NTX9 383 aaPredicted RBP21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 POLR3EQ9NVU0 708 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 ZBTB43O43298 467 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 SF3B3Q15393 1217 aaKnown RBP21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 NTRK3Q16288 839 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 NFXL1Q6ZNB6 911 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 ANKRD18AQ8IVF6 992 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 TDRD7Q8NHU6 1098 aaKnown RBP21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 PHKBQ93100 1093 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 ALG1Q9BT22 464 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 MYL10Q9BUA6 226 aa21.59■■□□□ 1.05
PRPF40B-208ENST00000548436 ZNF804BA4D1E1 1349 aa21.58■■□□□ 1.05
PRPF40B-208ENST00000548436 KINO60870 393 aaKnown RBP21.58■■□□□ 1.05
PRPF40B-208ENST00000548436 GNAT2P19087 354 aa21.58■■□□□ 1.05
PRPF40B-208ENST00000548436 GYG1P46976 350 aa21.58■■□□□ 1.05
PRPF40B-208ENST00000548436 STK38Q15208 465 aa21.58■■□□□ 1.05
PRPF40B-208ENST00000548436 ADGRA1Q86SQ6 560 aa21.58■■□□□ 1.05
PRPF40B-208ENST00000548436 SCN7AQ01118 1682 aa21.58■■□□□ 1.04
PRPF40B-208ENST00000548436 CDKL5O76039 1030 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 LIFRP42702 1097 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 TDO2P48775 406 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 BICDL1Q6ZP65 573 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 SPC24Q8NBT2 197 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 MRPS27Q92552 414 aaKnown RBP21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 COL1A1P02452 1464 aaPredicted RBP21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 IFIT3O14879 490 aaKnown RBP21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 YEATS4O95619 227 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 MFSD6Q6ZSS7 791 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 FMR1NBQ8N0W7 255 aaPredicted RBP21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 RGS22Q8NE09 1264 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 CNNM2Q9H8M5 875 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 BCL2L12Q9HB09 334 aa21.57■■□□□ 1.04
PRPF40B-208ENST00000548436 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 A0A1B0GVL5 298 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 A0A1W2PQ27 194 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 A0A1W2PQ64 194 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 A0A1W2PQD8 194 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 GOLGA8AA7E2F4 631 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 RANBP6O60518 1105 aaKnown RBP21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 TBC1D9BQ66K14 1250 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 C11orf57Q6ZUT1 292 aaPredicted RBP21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 KCNG4Q8TDN1 519 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 STAG1Q8WVM7 1258 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 NACAP1Q9BZK3 213 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 KRT23Q9C075 422 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 BSDC1Q9NW68 430 aaPredicted RBP21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 R3HCC1Q9Y3T6 440 aaKnown RBP21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 SPTLC2O15270 562 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 CYP7A1P22680 504 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 PIBF1Q8WXW3 757 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 ABCF2Q9UG63 623 aa21.56■■□□□ 1.04
PRPF40B-208ENST00000548436 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 NDUFA8P51970 172 aa21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 UBE4AQ14139 1066 aa21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 SF3A1Q15459 793 aaKnown RBP21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 RRP12Q5JTH9 1297 aaKnown RBP21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 KRT40Q6A162 431 aa21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 CPLX2Q6PUV4 134 aaKnown RBP21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 SYNE3Q6ZMZ3 975 aa21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 KCNF1Q9H3M0 494 aa21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 MINPP1Q9UNW1 487 aa21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 SLC12A7Q9Y666 1083 aa21.55■■□□□ 1.04
PRPF40B-208ENST00000548436 CAVIN2O95810 425 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 IQCB1Q15051 598 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 ANO1Q5XXA6 986 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 STK11IPQ8N1F8 1099 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 CELF1Q92879 486 aaKnown RBP21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 C8orf37Q96NL8 207 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 BAZ2AQ9UIF9 1905 aaKnown RBP21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 A0A087WWV3 80 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 CCDC69A6NI79 296 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 UBE2Q2LH0YL09 131 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 IARSP41252 1262 aaKnown RBP21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 VPS72Q15906 364 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 STX1AQ16623 288 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms