RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CACNA1BQ00975 2339 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 KIF22Q14807 665 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 RIC1Q4ADV7 1423 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 DMRTA1Q5VZB9 504 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 ZNF530Q6P9A1 599 aaPredicted RBP9.16□□□□□ -0.94
LDHA-223ENST00000545215 ARMC9Q7Z3E5 817 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 CRAMP1Q96RY5 1269 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 USTQ9Y2C2 406 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 ATP6V0A2Q9Y487 856 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 RIPOR2Q9Y4F9 1068 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 CFAP54Q96N23 3096 aa9.16□□□□□ -0.94
LDHA-223ENST00000545215 PALM3A6NDB9 673 aaPredicted RBP9.15□□□□□ -0.94
LDHA-223ENST00000545215 BMP1P13497 986 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 NF2P35240 595 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 SOX11P35716 441 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 UBXN2AP68543 259 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 SLC39A6Q13433 755 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 PLEKHO1Q53GL0 409 aaPredicted RBP9.15□□□□□ -0.94
LDHA-223ENST00000545215 ERMP1Q7Z2K6 904 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 PRR7Q8TB68 274 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 RPGRQ92834 1020 aaKnown RBP9.15□□□□□ -0.94
LDHA-223ENST00000545215 WNK4Q96J92 1243 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 TRIM47Q96LD4 638 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 UCN2Q96RP3 112 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 TMX4Q9H1E5 349 aaPredicted RBP9.15□□□□□ -0.94
LDHA-223ENST00000545215 KCNH6Q9H252 994 aa9.15□□□□□ -0.94
LDHA-223ENST00000545215 KMT2BQ9UMN6 2715 aaPredicted RBP9.14□□□□□ -0.95
LDHA-223ENST00000545215 FAM86C2PA6NEL3 165 aa9.14□□□□□ -0.95
LDHA-223ENST00000545215 LACTBP83111 547 aaPredicted RBP9.14□□□□□ -0.95
LDHA-223ENST00000545215 NR6A1Q15406 480 aa9.14□□□□□ -0.95
LDHA-223ENST00000545215 LAPTM4BQ86VI4 370 aa9.14□□□□□ -0.95
LDHA-223ENST00000545215 GZF1Q9H116 711 aaPredicted RBP9.14□□□□□ -0.95
LDHA-223ENST00000545215 BIN2Q9UBW5 565 aaPredicted RBP9.14□□□□□ -0.95
LDHA-223ENST00000545215 SCAF8Q9UPN6 1271 aaKnown RBP9.14□□□□□ -0.95
LDHA-223ENST00000545215 VPS9D1Q9Y2B5 631 aa9.14□□□□□ -0.95
LDHA-223ENST00000545215 TAF1P21675 1872 aa9.14□□□□□ -0.95
LDHA-223ENST00000545215 CHD8Q9HCK8 2581 aa9.13□□□□□ -0.95
LDHA-223ENST00000545215 FYB1O15117 783 aa9.13□□□□□ -0.95
LDHA-223ENST00000545215 PER1O15534 1290 aaPredicted RBP9.13□□□□□ -0.95
LDHA-223ENST00000545215 ITGB8P26012 769 aa9.13□□□□□ -0.95
LDHA-223ENST00000545215 AMOTQ4VCS5 1084 aa9.13□□□□□ -0.95
LDHA-223ENST00000545215 DPP8Q6V1X1 898 aaPredicted RBP9.13□□□□□ -0.95
LDHA-223ENST00000545215 DIS3LQ8TF46 1054 aaKnown RBP9.13□□□□□ -0.95
LDHA-223ENST00000545215 RBM17Q96I25 401 aaKnown RBP9.13□□□□□ -0.95
LDHA-223ENST00000545215 ZNF496Q96IT1 587 aaPredicted RBP9.13□□□□□ -0.95
LDHA-223ENST00000545215 FBXL18Q96ME1 805 aa9.13□□□□□ -0.95
LDHA-223ENST00000545215 ZFYVE28Q9HCC9 887 aa9.13□□□□□ -0.95
LDHA-223ENST00000545215 SRRDQ9UH36 339 aa9.13□□□□□ -0.95
LDHA-223ENST00000545215 ZSWIM8A7E2V4 1837 aa9.12□□□□□ -0.95
LDHA-223ENST00000545215 PRR33A8MZF0 331 aa9.12□□□□□ -0.95
LDHA-223ENST00000545215 GTF2E1P29083 439 aaPredicted RBP9.12□□□□□ -0.95
LDHA-223ENST00000545215 ZNF280AP59817 542 aaPredicted RBP9.12□□□□□ -0.95
LDHA-223ENST00000545215 SMAD3P84022 425 aaKnown RBP9.12□□□□□ -0.95
LDHA-223ENST00000545215 RETREG3Q86VR2 466 aa9.12□□□□□ -0.95
LDHA-223ENST00000545215 DZIP3Q86Y13 1208 aaKnown RBP9.12□□□□□ -0.95
LDHA-223ENST00000545215 RAET1EQ8TD07 263 aa9.12□□□□□ -0.95
LDHA-223ENST00000545215 SLC52A2Q9HAB3 445 aa9.12□□□□□ -0.95
LDHA-223ENST00000545215 EMILIN1Q9Y6C2 1016 aa9.12□□□□□ -0.95
LDHA-223ENST00000545215 FAM177BA6PVY3 158 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 PATL2C9JE40 543 aaKnown RBP9.11□□□□□ -0.95
LDHA-223ENST00000545215 BRD1O95696 1058 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 PBX2P40425 430 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 PRKG1Q13976 671 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 C1orf141Q5JVX7 400 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 VARS2Q5ST30 1063 aaKnown RBP9.11□□□□□ -0.95
LDHA-223ENST00000545215 MORN1Q5T089 497 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 TMCO4Q5TGY1 634 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 DESI1Q6ICB0 168 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 L3MBTL2Q969R5 705 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 DEFB118Q96PH6 123 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 GGNBP2Q9H3C7 697 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
LDHA-223ENST00000545215 NIP7Q9Y221 180 aaKnown RBP eCLIP9.11□□□□□ -0.95
LDHA-223ENST00000545215 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 USP34Q70CQ2 3546 aa9.11□□□□□ -0.95
LDHA-223ENST00000545215 ZFHX4Q86UP3 3567 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 KCNA1Q09470 495 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 COL9A2Q14055 689 aaPredicted RBP9.1□□□□□ -0.95
LDHA-223ENST00000545215 GRIN2CQ14957 1233 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 TAF1CQ15572 869 aaPredicted RBP9.1□□□□□ -0.95
LDHA-223ENST00000545215 KMT5BQ4FZB7 885 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 LHX8Q68G74 356 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 ANKLE1Q8NAG6 615 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 RGS22Q8NE09 1264 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 PPM1EQ8WY54 764 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 CLMNQ96JQ2 1002 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 KCNQ5Q9NR82 932 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
LDHA-223ENST00000545215 ZNF652Q9Y2D9 606 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 RTL9Q8NET4 1388 aa9.1□□□□□ -0.95
LDHA-223ENST00000545215 TCF20Q9UGU0 1960 aaKnown RBP9.1□□□□□ -0.95
LDHA-223ENST00000545215 UNCXA6NJT0 531 aa9.09□□□□□ -0.95
LDHA-223ENST00000545215 BHMG1C9JSJ3 638 aaPredicted RBP9.09□□□□□ -0.95
LDHA-223ENST00000545215 PI4K2BG5E9Z4 385 aa9.09□□□□□ -0.95
LDHA-223ENST00000545215 VIL1P09327 827 aaKnown RBP9.09□□□□□ -0.95
LDHA-223ENST00000545215 HOXD10P28358 340 aa9.09□□□□□ -0.95
LDHA-223ENST00000545215 NEUROD1Q13562 356 aa9.09□□□□□ -0.95
LDHA-223ENST00000545215 AKNAD1Q5T1N1 836 aa9.09□□□□□ -0.95
LDHA-223ENST00000545215 SP8Q8IXZ3 490 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms