RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 LDHCP07864 332 aa16.24■□□□□ 0.19
DDX55-213ENST00000545042 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
DDX55-213ENST00000545042 PI16Q6UXB8 463 aa16.24■□□□□ 0.19
DDX55-213ENST00000545042 RASAL3Q86YV0 1011 aa16.24■□□□□ 0.19
DDX55-213ENST00000545042 TMEM39BQ9GZU3 492 aa16.24■□□□□ 0.19
DDX55-213ENST00000545042 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
DDX55-213ENST00000545042 RAI14Q9P0K7 980 aa16.24■□□□□ 0.19
DDX55-213ENST00000545042 UNCXA6NJT0 531 aa16.23■□□□□ 0.19
DDX55-213ENST00000545042 CA12O43570 354 aa16.23■□□□□ 0.19
DDX55-213ENST00000545042 MECOMQ03112 1051 aa16.23■□□□□ 0.19
DDX55-213ENST00000545042 MAP3K11Q16584 847 aa16.23■□□□□ 0.19
DDX55-213ENST00000545042 LDLRAD1Q5T700 205 aa16.23■□□□□ 0.19
DDX55-213ENST00000545042 CDC42EP5Q6NZY7 148 aa16.23■□□□□ 0.19
DDX55-213ENST00000545042 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
DDX55-213ENST00000545042 FAM163AQ96GL9 167 aaPredicted RBP16.23■□□□□ 0.19
DDX55-213ENST00000545042 IL1RAPL2Q9NP60 686 aa16.23■□□□□ 0.19
DDX55-213ENST00000545042 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
DDX55-213ENST00000545042 TLR7Q9NYK1 1049 aaKnown RBP16.23■□□□□ 0.19
DDX55-213ENST00000545042 GAKO14976 1311 aa16.22■□□□□ 0.19
DDX55-213ENST00000545042 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
DDX55-213ENST00000545042 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
DDX55-213ENST00000545042 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
DDX55-213ENST00000545042 SLC10A4Q96EP9 437 aa16.22■□□□□ 0.19
DDX55-213ENST00000545042 TEPSINQ96N21 525 aa16.22■□□□□ 0.19
DDX55-213ENST00000545042 SSC5DA1L4H1 1573 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 MROH7-TTC4A0A0A0MT08 1334 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 IGSF3O75054 1194 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 ANKRD13AQ8IZ07 590 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 FAM151AQ8WW52 585 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 ZIC5Q96T25 663 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 NOL10Q9BSC4 688 aaKnown RBP16.21■□□□□ 0.19
DDX55-213ENST00000545042 BCL11AQ9H165 835 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
DDX55-213ENST00000545042 FZD1Q9UP38 647 aa16.21■□□□□ 0.19
DDX55-213ENST00000545042 USP2O75604 605 aaPredicted RBP16.2■□□□□ 0.18
DDX55-213ENST00000545042 BTDP43251 543 aa16.2■□□□□ 0.18
DDX55-213ENST00000545042 TCP10Q12799 353 aa16.2■□□□□ 0.18
DDX55-213ENST00000545042 DCAF15Q66K64 600 aa16.2■□□□□ 0.18
DDX55-213ENST00000545042 NSUN4Q96CB9 384 aaKnown RBP16.2■□□□□ 0.18
DDX55-213ENST00000545042 RPAP1Q9BWH6 1393 aaPredicted RBP16.2■□□□□ 0.18
DDX55-213ENST00000545042 GPR75-ASB3A0A0A6YYF3 556 aa16.19■□□□□ 0.18
DDX55-213ENST00000545042 MAP4K4O95819 1239 aaPredicted RBP16.19■□□□□ 0.18
DDX55-213ENST00000545042 ZAP70P43403 619 aa16.19■□□□□ 0.18
DDX55-213ENST00000545042 LBX1P52954 281 aa16.19■□□□□ 0.18
DDX55-213ENST00000545042 NAA16Q6N069 864 aaPredicted RBP16.19■□□□□ 0.18
DDX55-213ENST00000545042 CDAN1Q8IWY9 1227 aa16.19■□□□□ 0.18
DDX55-213ENST00000545042 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
DDX55-213ENST00000545042 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
DDX55-213ENST00000545042 ENTPD3O75355 529 aa16.18■□□□□ 0.18
DDX55-213ENST00000545042 CYP2E1P05181 493 aaPredicted RBP16.18■□□□□ 0.18
DDX55-213ENST00000545042 HSPA8P11142 646 aaKnown RBP16.18■□□□□ 0.18
DDX55-213ENST00000545042 NFIAQ12857 509 aa16.18■□□□□ 0.18
DDX55-213ENST00000545042 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
DDX55-213ENST00000545042 CSRNP1Q96S65 589 aa16.18■□□□□ 0.18
DDX55-213ENST00000545042 IDI2Q9BXS1 227 aa16.18■□□□□ 0.18
DDX55-213ENST00000545042 CSADQ9Y600 493 aa16.18■□□□□ 0.18
DDX55-213ENST00000545042 BAG3O95817 575 aa16.17■□□□□ 0.18
DDX55-213ENST00000545042 RGS3P49796 1198 aa16.17■□□□□ 0.18
DDX55-213ENST00000545042 MAP3K9P80192 1104 aa16.17■□□□□ 0.18
DDX55-213ENST00000545042 SREBF2Q12772 1141 aa16.17■□□□□ 0.18
DDX55-213ENST00000545042 SPRYD7Q5W111 196 aa16.17■□□□□ 0.18
DDX55-213ENST00000545042 CLMNQ96JQ2 1002 aa16.17■□□□□ 0.18
DDX55-213ENST00000545042 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
DDX55-213ENST00000545042 AKAP11Q9UKA4 1901 aa16.17■□□□□ 0.18
DDX55-213ENST00000545042 IDH1O75874 414 aaKnown RBP16.16■□□□□ 0.18
DDX55-213ENST00000545042 ZBTB48P10074 688 aaPredicted RBP16.16■□□□□ 0.18
DDX55-213ENST00000545042 PLCG2P16885 1265 aa16.16■□□□□ 0.18
DDX55-213ENST00000545042 MAP3K12Q12852 859 aa16.16■□□□□ 0.18
DDX55-213ENST00000545042 TTF1Q15361 905 aaPredicted RBP16.16■□□□□ 0.18
DDX55-213ENST00000545042 COL13A1Q5TAT6 717 aaPredicted RBP16.16■□□□□ 0.18
DDX55-213ENST00000545042 ZSCAN29Q8IWY8 852 aaPredicted RBP16.16■□□□□ 0.18
DDX55-213ENST00000545042 ZNF384Q8TF68 577 aa16.16■□□□□ 0.18
DDX55-213ENST00000545042 WNK4Q96J92 1243 aa16.16■□□□□ 0.18
DDX55-213ENST00000545042 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
DDX55-213ENST00000545042 ZNF341Q9BYN7 854 aa16.16■□□□□ 0.18
DDX55-213ENST00000545042 PIH1D3Q9NQM4 214 aaKnown RBP16.16■□□□□ 0.18
DDX55-213ENST00000545042 SAGE1Q9NXZ1 904 aa16.16■□□□□ 0.18
DDX55-213ENST00000545042 MANSC4A6NHS7 340 aaPredicted RBP16.15■□□□□ 0.18
DDX55-213ENST00000545042 PICALMQ13492 652 aa16.15■□□□□ 0.18
DDX55-213ENST00000545042 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
DDX55-213ENST00000545042 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
DDX55-213ENST00000545042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.15■□□□□ 0.18
DDX55-213ENST00000545042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.15■□□□□ 0.18
DDX55-213ENST00000545042 WRNIP1Q96S55 665 aa16.15■□□□□ 0.18
DDX55-213ENST00000545042 DCTPP1Q9H773 170 aa16.15■□□□□ 0.18
DDX55-213ENST00000545042 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
DDX55-213ENST00000545042 RNF186Q9NXI6 227 aa16.15■□□□□ 0.18
DDX55-213ENST00000545042 TSKSQ9UJT2 592 aa16.15■□□□□ 0.18
DDX55-213ENST00000545042 AK9Q5TCS8 1911 aa16.15■□□□□ 0.18
DDX55-213ENST00000545042 MAST2Q6P0Q8 1798 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
DDX55-213ENST00000545042 WDHD1O75717 1129 aaPredicted RBP16.14■□□□□ 0.17
DDX55-213ENST00000545042 TRPA1O75762 1119 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 TM4SF4P48230 202 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 INHBEP58166 350 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 RHBDL3P58872 404 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 AAMPQ13685 434 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 VGLL4Q14135 290 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms