RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 FAM84BQ96KN1 310 aaPredicted RBP20.27■□□□□ 0.84
DDX55-212ENST00000544738 API5Q9BZZ5 524 aaKnown RBP20.27■□□□□ 0.84
DDX55-212ENST00000544738 SRRDQ9UH36 339 aa20.27■□□□□ 0.84
DDX55-212ENST00000544738 CPA4Q9UI42 421 aa20.27■□□□□ 0.84
DDX55-212ENST00000544738 HDAC5Q9UQL6 1122 aa20.27■□□□□ 0.84
DDX55-212ENST00000544738 SPDYE5A6NIY4 337 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 CTGFP29279 349 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 GYG1P46976 350 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 TNNI2P48788 182 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 SNAPC2Q13487 334 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 UBE2Q1Q7Z7E8 422 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
DDX55-212ENST00000544738 TRIM47Q96LD4 638 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 SERPINA10Q9UK55 444 aa20.26■□□□□ 0.83
DDX55-212ENST00000544738 NOB1Q9ULX3 412 aaKnown RBP20.26■□□□□ 0.83
DDX55-212ENST00000544738 IRF6O14896 467 aa20.25■□□□□ 0.83
DDX55-212ENST00000544738 PDE8BO95263 885 aa20.25■□□□□ 0.83
DDX55-212ENST00000544738 OSBPP22059 807 aa20.25■□□□□ 0.83
DDX55-212ENST00000544738 LRRC24Q50LG9 513 aa20.25■□□□□ 0.83
DDX55-212ENST00000544738 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
DDX55-212ENST00000544738 MFSD14BQ5SR56 506 aa20.25■□□□□ 0.83
DDX55-212ENST00000544738 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
DDX55-212ENST00000544738 ERO1BQ86YB8 467 aa20.25■□□□□ 0.83
DDX55-212ENST00000544738 ZKSCAN4Q969J2 545 aaPredicted RBP20.25■□□□□ 0.83
DDX55-212ENST00000544738 ZCCHC17Q9NP64 241 aaKnown RBP20.25■□□□□ 0.83
DDX55-212ENST00000544738 UBTFL1P0CB47 393 aaPredicted RBP20.24■□□□□ 0.83
DDX55-212ENST00000544738 MNX1P50219 401 aaPredicted RBP20.24■□□□□ 0.83
DDX55-212ENST00000544738 STAP2Q9UGK3 403 aa20.24■□□□□ 0.83
DDX55-212ENST00000544738 SNCAIPQ9Y6H5 919 aa20.24■□□□□ 0.83
DDX55-212ENST00000544738 ZSWIM8A7E2V4 1837 aa20.24■□□□□ 0.83
DDX55-212ENST00000544738 ECM29Q5VYK3 1845 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 EVI5O60447 810 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 FARP2O94887 1054 aaPredicted RBP20.23■□□□□ 0.83
DDX55-212ENST00000544738 RARSP54136 660 aaKnown RBP20.23■□□□□ 0.83
DDX55-212ENST00000544738 UBXN2AP68543 259 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 FBXO33Q7Z6M2 555 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 VGLL2Q8N8G2 317 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 KLHDC4Q8TBB5 520 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 WRNIP1Q96S55 665 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 KIF16BQ96L93 1317 aa20.23■□□□□ 0.83
DDX55-212ENST00000544738 A0A1W2PPC1 479 aa20.22■□□□□ 0.83
DDX55-212ENST00000544738 CRKP46108 304 aa20.22■□□□□ 0.83
DDX55-212ENST00000544738 U2AF1L4Q8WU68 220 aaKnown RBP20.22■□□□□ 0.83
DDX55-212ENST00000544738 OTOFQ9HC10 1997 aa20.22■□□□□ 0.83
DDX55-212ENST00000544738 MYPNQ86TC9 1320 aa20.22■□□□□ 0.83
DDX55-212ENST00000544738 EYA2O00167 538 aa20.21■□□□□ 0.83
DDX55-212ENST00000544738 FRAT2O75474 233 aaPredicted RBP20.21■□□□□ 0.83
DDX55-212ENST00000544738 IFIT1P09914 478 aaKnown RBP20.21■□□□□ 0.83
DDX55-212ENST00000544738 CACNB3P54284 484 aa20.21■□□□□ 0.83
DDX55-212ENST00000544738 TBC1D22AQ8WUA7 517 aa20.21■□□□□ 0.83
DDX55-212ENST00000544738 FBXO3Q9UK99 471 aa20.21■□□□□ 0.83
DDX55-212ENST00000544738 RFX5P48382 616 aaPredicted RBP20.2■□□□□ 0.82
DDX55-212ENST00000544738 PPIL2Q13356 520 aa20.2■□□□□ 0.82
DDX55-212ENST00000544738 PUM3Q15397 648 aaKnown RBP20.2■□□□□ 0.82
DDX55-212ENST00000544738 UNC93B1Q9H1C4 597 aa20.2■□□□□ 0.82
DDX55-212ENST00000544738 PDHXO00330 501 aa20.19■□□□□ 0.82
DDX55-212ENST00000544738 IPO8O15397 1037 aaKnown RBP20.19■□□□□ 0.82
DDX55-212ENST00000544738 TFRCP02786 760 aaKnown RBP20.19■□□□□ 0.82
DDX55-212ENST00000544738 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.19■□□□□ 0.82
DDX55-212ENST00000544738 SGPL1O95470 568 aa20.18■□□□□ 0.82
DDX55-212ENST00000544738 FGFR2P21802 821 aa20.18■□□□□ 0.82
DDX55-212ENST00000544738 PRKCZQ05513 592 aa20.18■□□□□ 0.82
DDX55-212ENST00000544738 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
DDX55-212ENST00000544738 SLC5A1P13866 664 aa20.17■□□□□ 0.82
DDX55-212ENST00000544738 BCAMP50895 628 aa20.17■□□□□ 0.82
DDX55-212ENST00000544738 HDLBPQ00341 1268 aaKnown RBP20.17■□□□□ 0.82
DDX55-212ENST00000544738 ANKRD23Q86SG2 305 aa20.17■□□□□ 0.82
DDX55-212ENST00000544738 DEFB123Q8N688 67 aa20.17■□□□□ 0.82
DDX55-212ENST00000544738 LPIN2Q92539 896 aa20.17■□□□□ 0.82
DDX55-212ENST00000544738 CIAO1O76071 339 aa20.16■□□□□ 0.82
DDX55-212ENST00000544738 GNAI3P08754 354 aa20.16■□□□□ 0.82
DDX55-212ENST00000544738 PPATQ06203 517 aa20.16■□□□□ 0.82
DDX55-212ENST00000544738 CHAF1AQ13111 956 aaPredicted RBP20.16■□□□□ 0.82
DDX55-212ENST00000544738 GRIK5Q16478 980 aa20.16■□□□□ 0.82
DDX55-212ENST00000544738 DIEXFQ68CQ4 756 aaKnown RBP20.16■□□□□ 0.82
DDX55-212ENST00000544738 MIGA2Q7L4E1 593 aa20.16■□□□□ 0.82
DDX55-212ENST00000544738 ATG9AQ7Z3C6 839 aa20.16■□□□□ 0.82
DDX55-212ENST00000544738 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
DDX55-212ENST00000544738 LRRFIP2Q9Y608 721 aaKnown RBP20.16■□□□□ 0.82
DDX55-212ENST00000544738 UNC80Q8N2C7 3258 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 FCGRTP55899 365 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 Q7L0L9 218 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 SLAIN1Q8ND83 568 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 HOOK2Q96ED9 719 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 MRIQ9BWK5 157 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 TMOD2Q9NZR1 351 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 GABRQQ9UN88 632 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 SUGT1Q9Y2Z0 365 aa20.15■□□□□ 0.82
DDX55-212ENST00000544738 MAST3O60307 1309 aa20.14■□□□□ 0.81
DDX55-212ENST00000544738 INPP5BP32019 993 aa20.14■□□□□ 0.81
DDX55-212ENST00000544738 DCAF15Q66K64 600 aa20.14■□□□□ 0.81
DDX55-212ENST00000544738 MIER1Q8N108 512 aa20.14■□□□□ 0.81
DDX55-212ENST00000544738 DEFB118Q96PH6 123 aa20.14■□□□□ 0.81
DDX55-212ENST00000544738 MEIS3Q99687 375 aa20.14■□□□□ 0.81
DDX55-212ENST00000544738 SIL1Q9H173 461 aa20.14■□□□□ 0.81
DDX55-212ENST00000544738 ARAP2Q8WZ64 1704 aa20.13■□□□□ 0.81
DDX55-212ENST00000544738 ADCY3O60266 1144 aa20.13■□□□□ 0.81
DDX55-212ENST00000544738 IL15P40933 162 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms