RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 PRKG1Q13976 671 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 GRIK5Q16478 980 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 TTC39AQ5SRH9 613 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 NBPF12Q5TAG4 269 aaPredicted RBP12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 DAGLAQ9Y4D2 1042 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 GAKO14976 1311 aa12.62□□□□□ -0.39
NPIPB4-217ENST00000543449 TM4SF4P48230 202 aa12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 SPRYD7Q5W111 196 aa12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 FAM151AQ8WW52 585 aa12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 TEPSINQ96N21 525 aa12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 NOL10Q9BSC4 688 aaKnown RBP12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 CSADQ9Y600 493 aa12.61□□□□□ -0.39
NPIPB4-217ENST00000543449 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 ENTPD3O75355 529 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 TMEM39BQ9GZU3 492 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 USP40Q9NVE5 1235 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 HMG20BQ9P0W2 317 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
NPIPB4-217ENST00000543449 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 PLCG2P16885 1265 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 DIXDC1Q155Q3 683 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 CDC42EP5Q6NZY7 148 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 CERS3Q8IU89 383 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 CLASRPQ8N2M8 674 aaKnown RBP12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 WNK4Q96J92 1243 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 ZIC5Q96T25 663 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 ZNF341Q9BYN7 854 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 RAI14Q9P0K7 980 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 SSC5DA1L4H1 1573 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 MROH7-TTC4A0A0A0MT08 1334 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 AOX1Q06278 1338 aa12.59□□□□□ -0.39
NPIPB4-217ENST00000543449 WDHD1O75717 1129 aaPredicted RBP12.58□□□□□ -0.4
NPIPB4-217ENST00000543449 TRPA1O75762 1119 aa12.58□□□□□ -0.4
NPIPB4-217ENST00000543449 BAG3O95817 575 aa12.58□□□□□ -0.4
NPIPB4-217ENST00000543449 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
NPIPB4-217ENST00000543449 DBNDD2Q9BQY9 259 aa12.58□□□□□ -0.4
NPIPB4-217ENST00000543449 CFHR5Q9BXR6 569 aa12.58□□□□□ -0.4
NPIPB4-217ENST00000543449 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
NPIPB4-217ENST00000543449 MCAMP43121 646 aa12.57□□□□□ -0.4
NPIPB4-217ENST00000543449 BTDP43251 543 aa12.57□□□□□ -0.4
NPIPB4-217ENST00000543449 CACNB3P54284 484 aa12.57□□□□□ -0.4
NPIPB4-217ENST00000543449 MECOMQ03112 1051 aa12.57□□□□□ -0.4
NPIPB4-217ENST00000543449 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
NPIPB4-217ENST00000543449 GTF2A2P52657 109 aa12.56□□□□□ -0.4
NPIPB4-217ENST00000543449 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
NPIPB4-217ENST00000543449 AACSQ86V21 672 aa12.56□□□□□ -0.4
NPIPB4-217ENST00000543449 ERO1BQ86YB8 467 aa12.56□□□□□ -0.4
NPIPB4-217ENST00000543449 NSUN4Q96CB9 384 aaKnown RBP12.56□□□□□ -0.4
NPIPB4-217ENST00000543449 WRNIP1Q96S55 665 aa12.56□□□□□ -0.4
NPIPB4-217ENST00000543449 EXOC6BQ9Y2D4 811 aa12.56□□□□□ -0.4
NPIPB4-217ENST00000543449 AKAP11Q9UKA4 1901 aa12.56□□□□□ -0.4
NPIPB4-217ENST00000543449 IFIT2P09913 472 aaKnown RBP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 TCP10Q12799 353 aa12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 VGLL4Q14135 290 aa12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 ZSCAN29Q8IWY8 852 aaPredicted RBP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 OPTNQ96CV9 577 aa12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 CLMNQ96JQ2 1002 aa12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 ELP3Q9H9T3 547 aa12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.55□□□□□ -0.4
NPIPB4-217ENST00000543449 TESPA1A2RU30 521 aaPredicted RBP12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 SPDYE5A6NIY4 337 aa12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 RGS3P49796 1198 aa12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 PPATQ06203 517 aa12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 PKN2Q16513 984 aaKnown RBP12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 NOL9Q5SY16 702 aaKnown RBP12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 CCDC8Q9H0W5 538 aaPredicted RBP12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 ZCCHC17Q9NP64 241 aaKnown RBP12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 FAM198AQ9UFP1 575 aa12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 ZNF112Q9UJU3 913 aa12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 FZD1Q9UP38 647 aa12.54□□□□□ -0.4
NPIPB4-217ENST00000543449 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
NPIPB4-217ENST00000543449 CETPP11597 493 aa12.53□□□□□ -0.4
NPIPB4-217ENST00000543449 PPP4CP60510 307 aa12.53□□□□□ -0.4
NPIPB4-217ENST00000543449 NFIAQ12857 509 aa12.53□□□□□ -0.4
NPIPB4-217ENST00000543449 PPIL2Q13356 520 aa12.53□□□□□ -0.4
NPIPB4-217ENST00000543449 SNAPC2Q13487 334 aa12.53□□□□□ -0.4
NPIPB4-217ENST00000543449 PI16Q6UXB8 463 aa12.53□□□□□ -0.4
NPIPB4-217ENST00000543449 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms