RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZNF622Q969S3 477 aaKnown RBP eCLIP11.03□□□□□ -0.64
GNE-206ENST00000543356 COA1Q9GZY4 146 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 MCM5P33992 734 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 TDO2P48775 406 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 SNED1Q8TER0 1413 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 TBC1D22AQ8WUA7 517 aa11.03□□□□□ -0.64
GNE-206ENST00000543356 TRDNQ13061 729 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 GBP4Q96PP9 640 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 EYA3Q99504 573 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 PDGFDQ9GZP0 370 aaPredicted RBP11.02□□□□□ -0.65
GNE-206ENST00000543356 DYNLL1P63167 89 aaKnown RBP11.02□□□□□ -0.65
GNE-206ENST00000543356 GSE1Q14687 1217 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 BRF1Q92994 677 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 GTF3C6Q969F1 213 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 ANAPC4Q9UJX5 808 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 SMC3Q9UQE7 1217 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 JAG2Q9Y219 1238 aa11.02□□□□□ -0.65
GNE-206ENST00000543356 ZNF646O15015 1829 aaPredicted RBP11.01□□□□□ -0.65
GNE-206ENST00000543356 MCM4P33991 863 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 EVCP57679 992 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 CERS3Q8IU89 383 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 STAG1Q8WVM7 1258 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 CRNKL1Q9BZJ0 848 aaKnown RBP11.01□□□□□ -0.65
GNE-206ENST00000543356 CNNM2Q9H8M5 875 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 ZDHHC9Q9Y397 364 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 NAV1Q8NEY1 1877 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 PRC1O43663 620 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 PFKFB2O60825 505 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 BRD1O95696 1058 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 CHRNA5P30532 468 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 ANTXR2P58335 489 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 PKP1Q13835 747 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 HSP90AA2PQ14568 343 aaPredicted RBP11.01□□□□□ -0.65
GNE-206ENST00000543356 NECAB1Q8N987 351 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 RTFDC1Q9BY42 306 aaPredicted RBP11.01□□□□□ -0.65
GNE-206ENST00000543356 LRRC2Q9BYS8 371 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 ZC3H12CQ9C0D7 883 aaKnown RBP11.01□□□□□ -0.65
GNE-206ENST00000543356 MROH7-TTC4A0A0A0MT08 1334 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 NEDD4P46934 1319 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 MYH2Q9UKX2 1941 aa11.01□□□□□ -0.65
GNE-206ENST00000543356 DDX60LQ5H9U9 1706 aaKnown RBP11□□□□□ -0.65
GNE-206ENST00000543356 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
GNE-206ENST00000543356 LDHCP07864 332 aa11□□□□□ -0.65
GNE-206ENST00000543356 AKNAD1Q5T1N1 836 aa11□□□□□ -0.65
GNE-206ENST00000543356 CC2D2BQ6DHV5 1058 aa11□□□□□ -0.65
GNE-206ENST00000543356 OLFM4Q6UX06 510 aa11□□□□□ -0.65
GNE-206ENST00000543356 SDR42E1Q8WUS8 393 aa11□□□□□ -0.65
GNE-206ENST00000543356 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
GNE-206ENST00000543356 ZNF274Q96GC6 653 aaPredicted RBP11□□□□□ -0.65
GNE-206ENST00000543356 KRT23Q9C075 422 aa11□□□□□ -0.65
GNE-206ENST00000543356 RNF41Q9H4P4 317 aaPredicted RBP11□□□□□ -0.65
GNE-206ENST00000543356 ATP8A2Q9NTI2 1148 aa11□□□□□ -0.65
GNE-206ENST00000543356 AATFQ9NY61 560 aaKnown RBP eCLIP11□□□□□ -0.65
GNE-206ENST00000543356 SUGT1Q9Y2Z0 365 aa11□□□□□ -0.65
GNE-206ENST00000543356 PPP4CP60510 307 aa11□□□□□ -0.65
GNE-206ENST00000543356 PPARAQ07869 468 aa11□□□□□ -0.65
GNE-206ENST00000543356 CHMP4CQ96CF2 233 aa11□□□□□ -0.65
GNE-206ENST00000543356 WDR33Q9C0J8 1336 aaKnown RBP11□□□□□ -0.65
GNE-206ENST00000543356 CDK5RAP2Q96SN8 1893 aa11□□□□□ -0.65
GNE-206ENST00000543356 BAZ2AQ9UIF9 1905 aaKnown RBP11□□□□□ -0.65
GNE-206ENST00000543356 FOCADQ5VW36 1801 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 PCP11498 1178 aaKnown RBP10.99□□□□□ -0.65
GNE-206ENST00000543356 PTMSP20962 102 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 GJB2P29033 226 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 CTDSPL2Q05D32 466 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 APOBRQ0VD83 1088 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 GRIK5Q16478 980 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 GRIPAP1Q4V328 841 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 TMEM87BQ96K49 555 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 LLPHQ9BRT6 129 aaKnown RBP10.99□□□□□ -0.65
GNE-206ENST00000543356 MTA3Q9BTC8 594 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 BAG3O95817 575 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 MFSD14BQ5SR56 506 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 MFSD6Q6ZSS7 791 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 CYB5R4Q7L1T6 521 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 CHST3Q7LGC8 479 aa10.99□□□□□ -0.65
GNE-206ENST00000543356 FAM163AQ96GL9 167 aaPredicted RBP10.99□□□□□ -0.65
GNE-206ENST00000543356 GAKO14976 1311 aa10.98□□□□□ -0.65
GNE-206ENST00000543356 B4E1Z4 1266 aa10.98□□□□□ -0.65
GNE-206ENST00000543356 SH2B2O14492 632 aaPredicted RBP10.98□□□□□ -0.65
GNE-206ENST00000543356 SCRN1Q12765 414 aa10.98□□□□□ -0.65
GNE-206ENST00000543356 SBK1Q52WX2 424 aa10.98□□□□□ -0.65
GNE-206ENST00000543356 NOL10Q9BSC4 688 aaKnown RBP10.98□□□□□ -0.65
GNE-206ENST00000543356 ARPP21Q9UBL0 812 aaPredicted RBP10.98□□□□□ -0.65
GNE-206ENST00000543356 TACC3Q9Y6A5 838 aa10.98□□□□□ -0.65
GNE-206ENST00000543356 RRP9O43818 475 aaKnown RBP10.98□□□□□ -0.65
GNE-206ENST00000543356 BAG4O95429 457 aaKnown RBP10.98□□□□□ -0.65
GNE-206ENST00000543356 PDIA3P30101 505 aaKnown RBP10.98□□□□□ -0.65
GNE-206ENST00000543356 STK3Q13188 491 aa10.98□□□□□ -0.65
GNE-206ENST00000543356 SUPT20HQ8NEM7 779 aa10.98□□□□□ -0.65
GNE-206ENST00000543356 DCP1AQ9NPI6 582 aaPredicted RBP10.98□□□□□ -0.65
GNE-206ENST00000543356 ANGEL1Q9UNK9 670 aaKnown RBP10.98□□□□□ -0.65
GNE-206ENST00000543356 GPR75-ASB3A0A0A6YYF3 556 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 FGRP09769 529 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 SYT1P21579 422 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 GTF2IP78347 998 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 DIXDC1Q155Q3 683 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms