RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ZIC5Q96T25 663 aa12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 PRDM10Q9NQV6 1147 aa12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 LDHBP07195 334 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 SLC10A3P09131 477 aa12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TNNI2P48788 182 aa12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 LBX1P52954 281 aa12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 OS9Q13438 667 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 GPR108Q9NPR9 543 aa12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 DDX19BQ9UMR2 479 aa12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 ANGEL1Q9UNK9 670 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 SALL1Q9NSC2 1324 aa12□□□□□ -0.49
TNFRSF1A-214ENST00000543048 UNCXA6NJT0 531 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TCP10L2B9ZVM9 353 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 CA12O43570 354 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 HSPA8P11142 646 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 MAP3K11Q16584 847 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 LDLRAD1Q5T700 205 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 FKBP1CQ5VVH2 108 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 APOBEC3HQ6NTF7 200 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 CEP85Q6P2H3 762 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 RASAL3Q86YV0 1011 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 SLC10A4Q96EP9 437 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 YTHDC1Q96MU7 727 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 COG6Q9Y2V7 657 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 PDS5AQ29RF7 1337 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-214ENST00000543048 USP2O75604 605 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-214ENST00000543048 UQCRFS1P1P0C7P4 283 aa11.98□□□□□ -0.49
TNFRSF1A-214ENST00000543048 RASGRF1Q13972 1273 aa11.98□□□□□ -0.49
TNFRSF1A-214ENST00000543048 PDE3AQ14432 1141 aa11.98□□□□□ -0.49
TNFRSF1A-214ENST00000543048 RPAP2Q8IXW5 612 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-214ENST00000543048 CSRNP1Q96S65 589 aa11.98□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TMOD2Q9NZR1 351 aa11.98□□□□□ -0.49
TNFRSF1A-214ENST00000543048 MYO5AQ9Y4I1 1855 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 PRDX5P30044 214 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 IREB2P48200 963 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 CCDC158Q5M9N0 1113 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 FAM83AQ86UY5 434 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 SLF2Q8IX21 1173 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 SPATA5Q8NB90 893 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TEPSINQ96N21 525 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TMEM39BQ9GZU3 492 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 ABCF2Q9UG63 623 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 FZD1Q9UP38 647 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 DAGLAQ9Y4D2 1042 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 FPGT-TNNI3KV9GXZ4 949 aa11.97□□□□□ -0.49
TNFRSF1A-214ENST00000543048 ARID4AP29374 1257 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 CACNB3P54284 484 aa11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 HSP90AB4PQ58FF6 505 aa11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 ERC1Q8IUD2 1116 aa11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TNS4Q8IZW8 715 aa11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 USP40Q9NVE5 1235 aa11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 HMG20BQ9P0W2 317 aa11.96□□□□□ -0.49
TNFRSF1A-214ENST00000543048 HMMRO75330 724 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 LDHCP07864 332 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 TM4SF4P48230 202 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 TTC39AQ5SRH9 613 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 DZIP1Q86YF9 867 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 FAM151AQ8WW52 585 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 HOOK2Q96ED9 719 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 DBNDD2Q9BQY9 259 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 RNF186Q9NXI6 227 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
TNFRSF1A-214ENST00000543048 SSC5DA1L4H1 1573 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 TRPA1O75762 1119 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 MCAMP43121 646 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 GSTO1P78417 241 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 MAP3K9P80192 1104 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 SPRYD7Q5W111 196 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 TBC1D9Q6ZT07 1266 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ANKRD13AQ8IZ07 590 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CLMNQ96JQ2 1002 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ZNF512BQ96KM6 892 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CCDC8Q9H0W5 538 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
TNFRSF1A-214ENST00000543048 GAKO14976 1311 aa11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 INHBEP58166 350 aa11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 MECOMQ03112 1051 aa11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 CDAN1Q8IWY9 1227 aa11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 SIRT2Q8IXJ6 389 aa11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 EAF2Q96CJ1 260 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-214ENST00000543048 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms