RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SPC24Q8NBT2 197 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 ZCRB1Q8TBF4 217 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 NGLY1Q96IV0 654 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 ZNF396Q96N95 335 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 NEUROD6Q96NK8 337 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 PLA2G12BQ9BX93 195 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 DNAJC25Q9H1X3 360 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 GOLPH3LQ9H4A5 285 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 SOS2Q07890 1332 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 WDR17Q8IZU2 1322 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 COL5A2P05997 1499 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 CTIFO43310 598 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 ZFYP08048 801 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 SSTR3P32745 418 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 FAM160A1Q05DH4 1040 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 STX1AQ16623 288 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 ZSCAN25Q6NSZ9 544 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC186Q7Z3E2 898 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 CCAR1Q8IX12 1150 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 PROCA1Q8NCQ7 364 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 OSBP2Q969R2 916 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 MRFAP1L1Q96HT8 127 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 ZNF594Q96JF6 807 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 USP28Q96RU2 1077 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 PUS3Q9BZE2 481 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 RTEL1Q9NZ71 1219 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 WDR19Q8NEZ3 1342 aa6.08□□□□□ -1.44
ATPAF1-212ENST00000542495 CARMIL3Q8ND23 1372 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 A0A1W2PQ27 194 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 A0A1W2PQ64 194 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 A0A1W2PQD8 194 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 ADAMTS2O95450 1211 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 CSF1RP07333 972 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 CCT2P78371 535 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 FGD1P98174 961 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 EN1Q05925 392 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 TCIRG1Q13488 830 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 LRRFIP1Q32MZ4 808 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 TTLL5Q6EMB2 1281 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 C11orf57Q6ZUT1 292 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 MB21D2Q8IYB1 491 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 FMR1NBQ8N0W7 255 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 TRIM5Q9C035 493 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 FTOQ9C0B1 505 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 CEP126Q9P2H0 1117 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 NRBP1Q9UHY1 535 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 CTNNA3Q9UI47 895 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 TOGARAM1Q9Y4F4 1720 aa6.07□□□□□ -1.44
ATPAF1-212ENST00000542495 G3V3G9 751 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 NEMFO60524 1076 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 PCCAP05165 728 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 LRMPQ12912 555 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC144BQ3MJ40 725 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ADALQ6DHV7 355 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC73Q6ZRK6 1079 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 DHX40Q8IX18 779 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC144CPQ8IYA2 1237 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CACTINQ8WUQ7 758 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ANKRD7Q92527 254 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 APPBP2Q92624 585 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 XAGE2Q96GT9 111 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ZNF512BQ96KM6 892 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 BEGAINQ9BUH8 593 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC94Q9BW85 323 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CARD10Q9BWT7 1032 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ZBTB3Q9H5J0 574 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 BCL2L12Q9HB09 334 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 NCOA5Q9HCD5 579 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 KCND1Q9NSA2 647 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 USP21Q9UK80 565 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 TRPC5Q9UL62 973 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 HPS5Q9UPZ3 1129 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 AKAP2Q9Y2D5 859 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 NEDD4P46934 1319 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ATRNO75882 1429 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 RIC1Q4ADV7 1423 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 C4AP0C0L4 1744 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 C4BP0C0L5 1744 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ABCA3Q99758 1704 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 MYH7P12883 1935 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 KINO60870 393 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 YEATS4O95619 227 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 FGAP02671 866 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ADORA1P30542 326 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ANTXR2P58335 489 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 SCARF1Q14162 830 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 SYCP1Q15431 976 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 IMMTQ16891 758 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC57Q2TAC2 916 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC158Q5M9N0 1113 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 LINC00301Q8NCQ3 95 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 FBXO18Q8NFZ0 1043 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 TSC1Q92574 1164 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 RNF166Q96A37 237 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 BPIFA3Q9BQP9 254 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 TRAIPQ9BWF2 469 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 POLR3EQ9NVU0 708 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 ANO10Q9NW15 660 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms