RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
VARS2-212ENST00000542001 SETBP1Q9Y6X0 1596 aa18.42■□□□□ 0.54
VARS2-212ENST00000542001 ZNF500O60304 480 aaPredicted RBP18.42■□□□□ 0.54
VARS2-212ENST00000542001 GTF2F1P35269 517 aaKnown RBP eCLIP18.42■□□□□ 0.54
VARS2-212ENST00000542001 SMIM5Q71RC9 77 aa18.42■□□□□ 0.54
VARS2-212ENST00000542001 KRI1Q8N9T8 703 aaKnown RBP18.42■□□□□ 0.54
VARS2-212ENST00000542001 SPATA5Q8NB90 893 aa18.42■□□□□ 0.54
VARS2-212ENST00000542001 SEC63Q9UGP8 760 aaKnown RBP18.42■□□□□ 0.54
VARS2-212ENST00000542001 PFKFB1P16118 471 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 MTIF2P46199 727 aaKnown RBP18.41■□□□□ 0.54
VARS2-212ENST00000542001 PUM3Q15397 648 aaKnown RBP18.41■□□□□ 0.54
VARS2-212ENST00000542001 CACTINQ8WUQ7 758 aaKnown RBP18.41■□□□□ 0.54
VARS2-212ENST00000542001 DSCC1Q9BVC3 393 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 PDE8AO60658 829 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 PDE4BQ07343 736 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 HLFQ16534 295 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 BRAPQ7Z569 592 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 MCM6Q14566 821 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 DPCR1Q3MIW9 517 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 MYRIPQ8NFW9 859 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 TRIM47Q96LD4 638 aa18.41■□□□□ 0.54
VARS2-212ENST00000542001 LLPHQ9BRT6 129 aaKnown RBP18.41■□□□□ 0.54
VARS2-212ENST00000542001 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
VARS2-212ENST00000542001 PATL2C9JE40 543 aaKnown RBP18.4■□□□□ 0.54
VARS2-212ENST00000542001 ELF2Q15723 593 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 RPGRQ92834 1020 aaKnown RBP18.4■□□□□ 0.54
VARS2-212ENST00000542001 CRNKL1Q9BZJ0 848 aaKnown RBP18.4■□□□□ 0.54
VARS2-212ENST00000542001 VPS16Q9H269 839 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 CNNM2Q9H8M5 875 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 PAXBP1Q9Y5B6 917 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 TSPY3P0CV98 308 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 TSPY8P0CW00 308 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 RFC4P35249 363 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 MYL5Q02045 173 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 CTDP1Q9Y5B0 961 aaPredicted RBP18.4■□□□□ 0.54
VARS2-212ENST00000542001 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 PGBD1Q96JS3 809 aa18.4■□□□□ 0.54
VARS2-212ENST00000542001 SCARF1Q14162 830 aa18.39■□□□□ 0.54
VARS2-212ENST00000542001 PIK3AP1Q6ZUJ8 805 aa18.39■□□□□ 0.54
VARS2-212ENST00000542001 CCDC150Q8NCX0 1101 aa18.39■□□□□ 0.54
VARS2-212ENST00000542001 NFE2L3Q9Y4A8 694 aa18.39■□□□□ 0.54
VARS2-212ENST00000542001 CYP2D7A0A087X1C5 515 aa18.39■□□□□ 0.53
VARS2-212ENST00000542001 GRAMD1CQ8IYS0 662 aa18.39■□□□□ 0.53
VARS2-212ENST00000542001 RIMBP2O15034 1052 aa18.39■□□□□ 0.53
VARS2-212ENST00000542001 ADKP55263 362 aaKnown RBP18.39■□□□□ 0.53
VARS2-212ENST00000542001 NAA30Q147X3 362 aaPredicted RBP18.39■□□□□ 0.53
VARS2-212ENST00000542001 CCDC181Q5TID7 509 aa18.39■□□□□ 0.53
VARS2-212ENST00000542001 SPTY2D1Q68D10 685 aaPredicted RBP18.39■□□□□ 0.53
VARS2-212ENST00000542001 CRACR2BQ8N4Y2 399 aaPredicted RBP18.39■□□□□ 0.53
VARS2-212ENST00000542001 BLZF1Q9H2G9 400 aa18.39■□□□□ 0.53
VARS2-212ENST00000542001 SEPT11Q9NVA2 429 aaKnown RBP18.39■□□□□ 0.53
VARS2-212ENST00000542001 KIAA1468Q9P260 1216 aa18.39■□□□□ 0.53
VARS2-212ENST00000542001 PHACTR2O75167 634 aa18.39■□□□□ 0.53
VARS2-212ENST00000542001 SLU7O95391 586 aaKnown RBP18.39■□□□□ 0.53
VARS2-212ENST00000542001 CTSWP56202 376 aa18.39■□□□□ 0.53
VARS2-212ENST00000542001 NBPF26B4DH59 902 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 PPARDQ03181 441 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 TDRD12Q587J7 1177 aaKnown RBP18.38■□□□□ 0.53
VARS2-212ENST00000542001 NBPF14Q5TI25 921 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 NBPF10Q6P3W6 841 aaKnown RBP18.38■□□□□ 0.53
VARS2-212ENST00000542001 NBPF15Q8N660 670 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 FBXO18Q8NFZ0 1043 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 MROH2AA6NES4 1674 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 KIF2AO00139 706 aaPredicted RBP18.38■□□□□ 0.53
VARS2-212ENST00000542001 STAT6P42226 847 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 FKBP15Q5T1M5 1219 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 GNPATO15228 680 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 MTX1Q13505 466 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
VARS2-212ENST00000542001 TAF3Q5VWG9 929 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 LPIN2Q92539 896 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 DESI2Q9BSY9 194 aa18.38■□□□□ 0.53
VARS2-212ENST00000542001 CFAP74Q9C0B2 1584 aa18.37■□□□□ 0.53
VARS2-212ENST00000542001 SERTAD1Q9UHV2 236 aa18.37■□□□□ 0.53
VARS2-212ENST00000542001 USP17L12C9JPN9 530 aa18.37■□□□□ 0.53
VARS2-212ENST00000542001 USP17L21D6R901 530 aa18.37■□□□□ 0.53
VARS2-212ENST00000542001 PIK3C2BO00750 1634 aa18.37■□□□□ 0.53
VARS2-212ENST00000542001 STOX1Q6ZVD7 989 aa18.37■□□□□ 0.53
VARS2-212ENST00000542001 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
VARS2-212ENST00000542001 DDIT3P35638 169 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 ELP1O95163 1332 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 ARID5AQ03989 594 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 NR5A1Q13285 461 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 ZFYVE27Q5T4F4 411 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 JAKMIP3Q5VZ66 844 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 ZBTB38Q8NAP3 1195 aaPredicted RBP18.36■□□□□ 0.53
VARS2-212ENST00000542001 TCP11L1Q9NUJ3 509 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 MYO1BO43795 1136 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
VARS2-212ENST00000542001 CDC25AP30304 524 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 CACNA2D4Q7Z3S7 1137 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 PIGBQ92521 554 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 FANCLQ9NW38 375 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 ZNF215Q9UL58 517 aaPredicted RBP18.36■□□□□ 0.53
VARS2-212ENST00000542001 DIP2CQ9Y2E4 1556 aa18.36■□□□□ 0.53
VARS2-212ENST00000542001 KIF5BP33176 963 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 ZNF76P36508 570 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 ADALQ6DHV7 355 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 LMTK2Q8IWU2 1503 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms