RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 PDLIM2Q96JY6 352 aa16.55■□□□□ 0.24
GCFC2-211ENST00000541687 V9GY48 417 aaPredicted RBP16.55■□□□□ 0.24
GCFC2-211ENST00000541687 FRMPD1Q5SYB0 1578 aa16.55■□□□□ 0.24
GCFC2-211ENST00000541687 GTF2F1P35269 517 aaKnown RBP eCLIP16.54■□□□□ 0.24
GCFC2-211ENST00000541687 CACTINQ8WUQ7 758 aaKnown RBP16.54■□□□□ 0.24
GCFC2-211ENST00000541687 OVOS2A0A0J9YW53 1432 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 OVOS2Q6IE36 1432 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 IFT172Q9UG01 1749 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 PHKA1P46020 1223 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 ELF2Q15723 593 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 ZNF827Q17R98 1081 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 AIFM3Q96NN9 605 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 PDE8AO60658 829 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 CRNKL1Q9BZJ0 848 aaKnown RBP16.54■□□□□ 0.24
GCFC2-211ENST00000541687 KRT222Q8N1A0 295 aa16.54■□□□□ 0.24
GCFC2-211ENST00000541687 PUS7LQ9H0K6 701 aaKnown RBP16.54■□□□□ 0.24
GCFC2-211ENST00000541687 HEATR3Q7Z4Q2 680 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 SYNE4Q8N205 404 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 CCT6AP40227 531 aaKnown RBP16.53■□□□□ 0.24
GCFC2-211ENST00000541687 MTIF2P46199 727 aaKnown RBP16.53■□□□□ 0.24
GCFC2-211ENST00000541687 SPATA5Q8NB90 893 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 KIF5BP33176 963 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 ARID5BQ14865 1188 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 NCOA3Q9Y6Q9 1424 aa16.53■□□□□ 0.24
GCFC2-211ENST00000541687 SNAP23O00161 211 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 PDE6AP16499 860 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 RESTQ13127 1097 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 KIAA1524Q8TCG1 905 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 BMS1Q14692 1282 aaKnown RBP16.52■□□□□ 0.24
GCFC2-211ENST00000541687 DPCR1Q3MIW9 517 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 LPIN2Q92539 896 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 PGBD1Q96JS3 809 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.24
GCFC2-211ENST00000541687 CENPHQ9H3R5 247 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 NFE2L3Q9Y4A8 694 aa16.52■□□□□ 0.24
GCFC2-211ENST00000541687 BTBD18B2RXH4 712 aa16.52■□□□□ 0.23
GCFC2-211ENST00000541687 YEATS4O95619 227 aa16.52■□□□□ 0.23
GCFC2-211ENST00000541687 PUF60Q9UHX1 559 aaKnown RBP16.52■□□□□ 0.23
GCFC2-211ENST00000541687 TMEM94Q12767 1356 aa16.52■□□□□ 0.23
GCFC2-211ENST00000541687 STAT6P42226 847 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 NLRP12P59046 1061 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
GCFC2-211ENST00000541687 VPS54Q9P1Q0 977 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 MCM6Q14566 821 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 SDR42E1Q8WUS8 393 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 TCP11L1Q9NUJ3 509 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 EIF3JO75822 258 aaKnown RBP16.51■□□□□ 0.23
GCFC2-211ENST00000541687 BCAMP50895 628 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 LRRC8AQ8IWT6 810 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 KRT2P35908 639 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 CTSWP56202 376 aa16.51■□□□□ 0.23
GCFC2-211ENST00000541687 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
GCFC2-211ENST00000541687 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
GCFC2-211ENST00000541687 CCDC178Q5BJE1 867 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 CDC42BPGQ6DT37 1551 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 CARMIL3Q8ND23 1372 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 TSPY3P0CV98 308 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 TSPY8P0CW00 308 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 GNAT2P19087 354 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 RDXP35241 583 aaKnown RBP16.5■□□□□ 0.23
GCFC2-211ENST00000541687 ZBTB38Q8NAP3 1195 aaPredicted RBP16.5■□□□□ 0.23
GCFC2-211ENST00000541687 BMP2KQ9NSY1 1161 aaPredicted RBP16.5■□□□□ 0.23
GCFC2-211ENST00000541687 ZNF215Q9UL58 517 aaPredicted RBP16.5■□□□□ 0.23
GCFC2-211ENST00000541687 F8W031 263 aaPredicted RBP16.5■□□□□ 0.23
GCFC2-211ENST00000541687 GOLGA8FQ08AF8 430 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 GOLGA8DPQ0D2H9 430 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 RILPL1Q5EBL4 403 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 ZNF397Q8NF99 534 aaPredicted RBP16.5■□□□□ 0.23
GCFC2-211ENST00000541687 CCDC148Q8NFR7 591 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 SLAIN2Q9P270 581 aa16.5■□□□□ 0.23
GCFC2-211ENST00000541687 MATR3P43243 847 aaKnown RBP eCLIP16.49■□□□□ 0.238e-9■■■■□ 20.4
GCFC2-211ENST00000541687 PLCD4Q9BRC7 762 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 NRKQ7Z2Y5 1582 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 SPA17Q15506 151 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 TDRD7Q8NHU6 1098 aaKnown RBP16.49■□□□□ 0.23
GCFC2-211ENST00000541687 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 ZNF219Q9P2Y4 722 aaPredicted RBP16.49■□□□□ 0.23
GCFC2-211ENST00000541687 TRIM21P19474 475 aaKnown RBP16.49■□□□□ 0.23
GCFC2-211ENST00000541687 DRC1Q96MC2 740 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 VPS16Q9H269 839 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 PPLO60437 1756 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 PIK3AP1Q6ZUJ8 805 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 IFNL3Q8IZI9 196 aa16.49■□□□□ 0.23
GCFC2-211ENST00000541687 CARD6Q9BX69 1037 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms