RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 PRMT2P55345 433 aa16.42■□□□□ 0.22
SCARB1-207ENST00000541661 KIF22Q14807 665 aa16.42■□□□□ 0.22
SCARB1-207ENST00000541661 FAM151AQ8WW52 585 aa16.42■□□□□ 0.22
SCARB1-207ENST00000541661 ZNF341Q9BYN7 854 aa16.42■□□□□ 0.22
SCARB1-207ENST00000541661 ZNF112Q9UJU3 913 aa16.42■□□□□ 0.22
SCARB1-207ENST00000541661 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-207ENST00000541661 SLC4A8Q2Y0W8 1093 aa16.41■□□□□ 0.22
SCARB1-207ENST00000541661 C17orf99Q6UX52 265 aa16.41■□□□□ 0.22
SCARB1-207ENST00000541661 FAM9BQ8IZU0 186 aa16.41■□□□□ 0.22
SCARB1-207ENST00000541661 WDR66Q8TBY9 1149 aa16.41■□□□□ 0.22
SCARB1-207ENST00000541661 ARHGAP39Q9C0H5 1083 aa16.41■□□□□ 0.22
SCARB1-207ENST00000541661 EYA2O00167 538 aa16.4■□□□□ 0.22
SCARB1-207ENST00000541661 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
SCARB1-207ENST00000541661 LPIN2Q92539 896 aa16.4■□□□□ 0.22
SCARB1-207ENST00000541661 KCNH4Q9UQ05 1017 aa16.4■□□□□ 0.22
SCARB1-207ENST00000541661 SLC5A1P13866 664 aa16.39■□□□□ 0.21
SCARB1-207ENST00000541661 INPP5BP32019 993 aa16.39■□□□□ 0.21
SCARB1-207ENST00000541661 MIGA2Q7L4E1 593 aa16.39■□□□□ 0.21
SCARB1-207ENST00000541661 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
SCARB1-207ENST00000541661 ATG9AQ7Z3C6 839 aa16.38■□□□□ 0.21
SCARB1-207ENST00000541661 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-207ENST00000541661 SSH1Q8WYL5 1049 aa16.38■□□□□ 0.21
SCARB1-207ENST00000541661 DAGLAQ9Y4D2 1042 aa16.38■□□□□ 0.21
SCARB1-207ENST00000541661 AK9Q5TCS8 1911 aa16.38■□□□□ 0.21
SCARB1-207ENST00000541661 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
SCARB1-207ENST00000541661 ZBTB22O15209 634 aa16.37■□□□□ 0.21
SCARB1-207ENST00000541661 CTGFP29279 349 aa16.37■□□□□ 0.21
SCARB1-207ENST00000541661 FXR1P51114 621 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCARB1-207ENST00000541661 MOGSQ13724 837 aa16.37■□□□□ 0.21
SCARB1-207ENST00000541661 NOL9Q5SY16 702 aaKnown RBP16.37■□□□□ 0.21
SCARB1-207ENST00000541661 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
SCARB1-207ENST00000541661 SRRDQ9UH36 339 aa16.37■□□□□ 0.21
SCARB1-207ENST00000541661 CPA4Q9UI42 421 aa16.37■□□□□ 0.21
SCARB1-207ENST00000541661 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
SCARB1-207ENST00000541661 PDHXO00330 501 aa16.36■□□□□ 0.21
SCARB1-207ENST00000541661 HOXD10P28358 340 aa16.36■□□□□ 0.21
SCARB1-207ENST00000541661 PSMC4P43686 418 aa16.36■□□□□ 0.21
SCARB1-207ENST00000541661 DIXDC1Q155Q3 683 aa16.36■□□□□ 0.21
SCARB1-207ENST00000541661 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
SCARB1-207ENST00000541661 COLQQ9Y215 455 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-207ENST00000541661 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
SCARB1-207ENST00000541661 E9PSI1 815 aa16.35■□□□□ 0.21
SCARB1-207ENST00000541661 CXCL11O14625 94 aa16.35■□□□□ 0.21
SCARB1-207ENST00000541661 CIAO1O76071 339 aa16.35■□□□□ 0.21
SCARB1-207ENST00000541661 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-207ENST00000541661 PRDX5P30044 214 aa16.35■□□□□ 0.21
SCARB1-207ENST00000541661 TCP10Q12799 353 aa16.35■□□□□ 0.21
SCARB1-207ENST00000541661 NFIAQ12857 509 aa16.35■□□□□ 0.21
SCARB1-207ENST00000541661 FAM198AQ9UFP1 575 aa16.35■□□□□ 0.21
SCARB1-207ENST00000541661 MGAMO43451 1857 aa16.34■□□□□ 0.21
SCARB1-207ENST00000541661 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-207ENST00000541661 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
SCARB1-207ENST00000541661 OSBPP22059 807 aa16.34■□□□□ 0.21
SCARB1-207ENST00000541661 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-207ENST00000541661 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
SCARB1-207ENST00000541661 USP40Q9NVE5 1235 aa16.34■□□□□ 0.21
SCARB1-207ENST00000541661 GNL3LQ9NVN8 582 aaKnown RBP16.34■□□□□ 0.21
SCARB1-207ENST00000541661 H0YGN5 161 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 SEMA3EO15041 775 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 MTFR1Q15390 333 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 GPAT2Q6NUI2 795 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 SHISA4Q96DD7 197 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 DENND2AQ9ULE3 1009 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 ATRNL1Q5VV63 1379 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 DOCK2Q92608 1830 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 MYH2Q9UKX2 1941 aa16.33■□□□□ 0.2
SCARB1-207ENST00000541661 PHF20L1A8MW92 1017 aa16.32■□□□□ 0.2
SCARB1-207ENST00000541661 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-207ENST00000541661 BCRP11274 1271 aa16.32■□□□□ 0.2
SCARB1-207ENST00000541661 GRK4P32298 578 aa16.32■□□□□ 0.2
SCARB1-207ENST00000541661 MAP3K10Q02779 954 aa16.32■□□□□ 0.2
SCARB1-207ENST00000541661 ZFPM1Q8IX07 1006 aa16.32■□□□□ 0.2
SCARB1-207ENST00000541661 RAET1EQ8TD07 263 aa16.32■□□□□ 0.2
SCARB1-207ENST00000541661 IDI2Q9BXS1 227 aa16.32■□□□□ 0.2
SCARB1-207ENST00000541661 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
SCARB1-207ENST00000541661 ENTPD3O75355 529 aa16.31■□□□□ 0.2
SCARB1-207ENST00000541661 GJB1P08034 283 aa16.31■□□□□ 0.2
SCARB1-207ENST00000541661 GJA8P48165 433 aa16.31■□□□□ 0.2
SCARB1-207ENST00000541661 UBE2Q1Q7Z7E8 422 aa16.31■□□□□ 0.2
SCARB1-207ENST00000541661 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
SCARB1-207ENST00000541661 CEP290O15078 2479 aa16.3■□□□□ 0.2
SCARB1-207ENST00000541661 GAKO14976 1311 aa16.3■□□□□ 0.2
SCARB1-207ENST00000541661 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-207ENST00000541661 ECM2O94769 699 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-207ENST00000541661 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-207ENST00000541661 CCL5P13501 91 aa16.3■□□□□ 0.2
SCARB1-207ENST00000541661 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-207ENST00000541661 PHKA1P46020 1223 aa16.3■□□□□ 0.2
SCARB1-207ENST00000541661 FASTKD5Q7L8L6 764 aaKnown RBP16.3■□□□□ 0.2
SCARB1-207ENST00000541661 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-207ENST00000541661 ZGPATQ8N5A5 531 aaKnown RBP16.3■□□□□ 0.2
SCARB1-207ENST00000541661 SIL1Q9H173 461 aa16.3■□□□□ 0.2
SCARB1-207ENST00000541661 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
SCARB1-207ENST00000541661 AFG3L2Q9Y4W6 797 aa16.3■□□□□ 0.2
SCARB1-207ENST00000541661 PTPRFP10586 1907 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 RFX7Q2KHR2 1363 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms