RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ATP2A2P16615 1042 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 GSTO1P78417 241 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 GPT2Q8TD30 523 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 OTUD7AQ8TE49 926 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 VCXQ9H320 206 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 FEZ2Q9UHY8 353 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 ACEP12821 1306 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 VGLL3A8MV65 326 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 LMBR1LQ6UX01 489 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 XAGE3Q8WTP9 111 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 SEL1L2Q5TEA6 688 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 LRRC8AQ8IWT6 810 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 NOC4LQ9BVI4 516 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 XPO4Q9C0E2 1151 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 AKAP4Q5JQC9 854 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 TAOK1Q7L7X3 1001 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 TSC1Q92574 1164 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 PLCB1Q9NQ66 1216 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 NFE2L3Q9Y4A8 694 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 ANXA1P04083 346 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
SMARCA4-207ENST00000541122 NOL3O60936 208 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 SF3B2Q13435 895 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 PPP1R7Q15435 360 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 SMIM23A6NLE4 172 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 SH3BGRP55822 239 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 ARID5AQ03989 594 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 CDC37L1Q7L3B6 337 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 WWC3Q9ULE0 1092 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 UTP11Q9Y3A2 253 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 PAK1Q13153 545 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 GSTA5Q7RTV2 222 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
SMARCA4-207ENST00000541122 RGS12O14924 1447 aa16.77■□□□□ 0.28
SMARCA4-207ENST00000541122 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.28
SMARCA4-207ENST00000541122 CYP7A1P22680 504 aa16.77■□□□□ 0.28
SMARCA4-207ENST00000541122 FYB2Q5VWT5 728 aa16.77■□□□□ 0.28
SMARCA4-207ENST00000541122 VAT1LQ9HCJ6 419 aa16.77■□□□□ 0.28
SMARCA4-207ENST00000541122 DEXIO95424 95 aa16.77■□□□□ 0.28
SMARCA4-207ENST00000541122 NAPAP54920 295 aa16.77■□□□□ 0.28
SMARCA4-207ENST00000541122 RABGGTAQ92696 567 aa16.77■□□□□ 0.28
SMARCA4-207ENST00000541122 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.27
SMARCA4-207ENST00000541122 RIMS2Q9UQ26 1411 aa16.77■□□□□ 0.27
SMARCA4-207ENST00000541122 CFAP221Q4G0U5 840 aa16.77■□□□□ 0.27
SMARCA4-207ENST00000541122 VPS16Q9H269 839 aa16.77■□□□□ 0.27
SMARCA4-207ENST00000541122 ANAPC4Q9UJX5 808 aa16.77■□□□□ 0.27
SMARCA4-207ENST00000541122 CLGNO14967 610 aa16.77■□□□□ 0.27
SMARCA4-207ENST00000541122 SLC8A1P32418 973 aa16.77■□□□□ 0.27
SMARCA4-207ENST00000541122 MTX1Q13505 466 aa16.77■□□□□ 0.27
SMARCA4-207ENST00000541122 RPL13P26373 211 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 KRT9P35527 623 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 COPS6Q7L5N1 327 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 ANTXR1Q9H6X2 564 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 ATP6V0A2Q9Y487 856 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 FLT4P35916 1363 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 MAP3K5Q99683 1374 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 MEX3CQ5U5Q3 659 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 ADALQ6DHV7 355 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 TSPY3P0CV98 308 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 TSPY8P0CW00 308 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 GNA11P29992 359 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 FAM173BQ6P4H8 233 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 CNNM4Q6P4Q7 775 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 CHST3Q7LGC8 479 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 ARHGAP24Q8N264 748 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 NAP1L4Q99733 375 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 APBA1Q02410 837 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 ANKIB1Q9P2G1 1089 aa16.76■□□□□ 0.27
SMARCA4-207ENST00000541122 KIF3CO14782 793 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 TDRD7Q8NHU6 1098 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 SAR1BQ9Y6B6 198 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 NEDD9Q14511 834 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 POSTNQ15063 836 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 HS2ST1Q7LGA3 356 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 CSRNP2Q9H175 543 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 KIAA1468Q9P260 1216 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 CCDC25Q86WR0 208 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 STX8Q9UNK0 236 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 MCM7P33993 719 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 CCDC38Q502W7 563 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 CEP85LQ5SZL2 805 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 CAPN7Q9Y6W3 813 aa16.75■□□□□ 0.27
SMARCA4-207ENST00000541122 SETSIPP0DME0 302 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 NUCKS1Q9H1E3 243 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 PPP2R2CQ9Y2T4 447 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 FAM135BQ49AJ0 1406 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 HOXB7P09629 217 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 MRVI1Q9Y6F6 885 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 GNGT1P63211 74 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 TFCP2Q12800 502 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 CCDC152Q4G0S7 254 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms