RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 GNL3LQ9NVN8 582 aaKnown RBP20.39■□□□□ 0.85
UBC-208ENST00000540700 DENND2AQ9ULE3 1009 aa20.39■□□□□ 0.85
UBC-208ENST00000540700 GPR25O00155 361 aa20.38■□□□□ 0.85
UBC-208ENST00000540700 SEMA3EO15041 775 aa20.38■□□□□ 0.85
UBC-208ENST00000540700 FRAT2O75474 233 aaPredicted RBP20.38■□□□□ 0.85
UBC-208ENST00000540700 ATP5JP18859 108 aa20.38■□□□□ 0.85
UBC-208ENST00000540700 PLEKHM2Q8IWE5 1019 aa20.38■□□□□ 0.85
UBC-208ENST00000540700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.38■□□□□ 0.85
UBC-208ENST00000540700 BOLA2Q9H3K6 86 aa20.38■□□□□ 0.85
UBC-208ENST00000540700 ANTXR1Q9H6X2 564 aa20.38■□□□□ 0.85
UBC-208ENST00000540700 STAP2Q9UGK3 403 aa20.38■□□□□ 0.85
UBC-208ENST00000540700 MYH13Q9UKX3 1938 aa20.37■□□□□ 0.85
UBC-208ENST00000540700 PAPPA2Q9BXP8 1791 aa20.37■□□□□ 0.85
UBC-208ENST00000540700 PDS5AQ29RF7 1337 aaKnown RBP20.37■□□□□ 0.85
UBC-208ENST00000540700 PITPNM2Q9BZ72 1349 aa20.37■□□□□ 0.85
UBC-208ENST00000540700 CYP2E1P05181 493 aaPredicted RBP20.37■□□□□ 0.85
UBC-208ENST00000540700 PDE1AP54750 535 aa20.37■□□□□ 0.85
UBC-208ENST00000540700 NBPF9Q3BBW0 867 aa20.37■□□□□ 0.85
UBC-208ENST00000540700 TBC1D9Q6ZT07 1266 aa20.37■□□□□ 0.85
UBC-208ENST00000540700 MFSD14BQ5SR56 506 aa20.36■□□□□ 0.85
UBC-208ENST00000540700 FBXO46Q6PJ61 603 aaPredicted RBP20.36■□□□□ 0.85
UBC-208ENST00000540700 PIH1D3Q9NQM4 214 aaKnown RBP20.36■□□□□ 0.85
UBC-208ENST00000540700 GTF3C3Q9Y5Q9 886 aa20.36■□□□□ 0.85
UBC-208ENST00000540700 TTC41PQ6P2S7 1318 aa20.35■□□□□ 0.85
UBC-208ENST00000540700 SALL1Q9NSC2 1324 aa20.35■□□□□ 0.85
UBC-208ENST00000540700 PRDX5P30044 214 aa20.35■□□□□ 0.85
UBC-208ENST00000540700 TM4SF4P48230 202 aa20.35■□□□□ 0.85
UBC-208ENST00000540700 FKBP1AP62942 108 aaKnown RBP20.35■□□□□ 0.85
UBC-208ENST00000540700 PRKG1Q13976 671 aa20.35■□□□□ 0.85
UBC-208ENST00000540700 ZNF384Q8TF68 577 aa20.35■□□□□ 0.85
UBC-208ENST00000540700 HAUS7Q99871 368 aa20.35■□□□□ 0.85
UBC-208ENST00000540700 ZBTB47Q9UFB7 747 aaPredicted RBP20.35■□□□□ 0.85
UBC-208ENST00000540700 KIAA0825Q8IV33 1275 aa20.34■□□□□ 0.85
UBC-208ENST00000540700 WDR66Q8TBY9 1149 aa20.34■□□□□ 0.85
UBC-208ENST00000540700 DNAJC2Q99543 621 aaKnown RBP20.34■□□□□ 0.85
UBC-208ENST00000540700 R3HDMLQ9H3Y0 253 aa20.34■□□□□ 0.85
UBC-208ENST00000540700 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
UBC-208ENST00000540700 F8W031 263 aaPredicted RBP20.33■□□□□ 0.85
UBC-208ENST00000540700 FKTNO75072 461 aa20.33■□□□□ 0.85
UBC-208ENST00000540700 MAP4K4O95819 1239 aaPredicted RBP20.33■□□□□ 0.85
UBC-208ENST00000540700 NF2P35240 595 aa20.33■□□□□ 0.85
UBC-208ENST00000540700 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
UBC-208ENST00000540700 PCDHAC2Q9Y5I4 1007 aa20.33■□□□□ 0.85
UBC-208ENST00000540700 CHGBP05060 677 aa20.32■□□□□ 0.84
UBC-208ENST00000540700 SREBF2Q12772 1141 aa20.32■□□□□ 0.84
UBC-208ENST00000540700 TBC1D22AQ8WUA7 517 aa20.32■□□□□ 0.84
UBC-208ENST00000540700 AOX1Q06278 1338 aa20.31■□□□□ 0.84
UBC-208ENST00000540700 GOLIM4O00461 696 aa20.31■□□□□ 0.84
UBC-208ENST00000540700 OGFOD1Q8N543 542 aa20.31■□□□□ 0.84
UBC-208ENST00000540700 GPATCH3Q96I76 525 aa20.31■□□□□ 0.84
UBC-208ENST00000540700 ABCF2Q9UG63 623 aa20.31■□□□□ 0.84
UBC-208ENST00000540700 MYO5AQ9Y4I1 1855 aaKnown RBP20.3■□□□□ 0.84
UBC-208ENST00000540700 MYO3BQ8WXR4 1341 aa20.3■□□□□ 0.84
UBC-208ENST00000540700 GLRX3O76003 335 aaKnown RBP20.3■□□□□ 0.84
UBC-208ENST00000540700 PAG1Q9NWQ8 432 aa20.3■□□□□ 0.84
UBC-208ENST00000540700 TTF2Q9UNY4 1162 aaKnown RBP20.3■□□□□ 0.84
UBC-208ENST00000540700 MKI67P46013 3256 aaKnown RBP20.3■□□□□ 0.84
UBC-208ENST00000540700 DOCK2Q92608 1830 aa20.3■□□□□ 0.84
UBC-208ENST00000540700 WNT10BO00744 389 aa20.29■□□□□ 0.84
UBC-208ENST00000540700 GSPT1P15170 499 aaKnown RBP20.29■□□□□ 0.84
UBC-208ENST00000540700 SLFNL1Q499Z3 407 aa20.29■□□□□ 0.84
UBC-208ENST00000540700 NOM1Q5C9Z4 860 aaKnown RBP20.29■□□□□ 0.84
UBC-208ENST00000540700 ARMC9Q7Z3E5 817 aa20.29■□□□□ 0.84
UBC-208ENST00000540700 HTTP42858 3142 aa20.28■□□□□ 0.84
UBC-208ENST00000540700 ERC2O15083 957 aa20.28■□□□□ 0.84
UBC-208ENST00000540700 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
UBC-208ENST00000540700 FZD1Q9UP38 647 aa20.28■□□□□ 0.84
UBC-208ENST00000540700 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.84
UBC-208ENST00000540700 MECOMQ03112 1051 aa20.27■□□□□ 0.84
UBC-208ENST00000540700 HABP4Q5JVS0 413 aaKnown RBP20.27■□□□□ 0.84
UBC-208ENST00000540700 ERICH6Q7L0X2 663 aa20.27■□□□□ 0.84
UBC-208ENST00000540700 NSUN4Q96CB9 384 aaKnown RBP20.27■□□□□ 0.84
UBC-208ENST00000540700 ZBED3Q96IU2 234 aaPredicted RBP20.27■□□□□ 0.84
UBC-208ENST00000540700 ANGEL1Q9UNK9 670 aaKnown RBP20.27■□□□□ 0.84
UBC-208ENST00000540700 SUGT1Q9Y2Z0 365 aa20.27■□□□□ 0.84
UBC-208ENST00000540700 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
UBC-208ENST00000540700 TTC22Q5TAA0 569 aa20.26■□□□□ 0.83
UBC-208ENST00000540700 SPRYD7Q5W111 196 aa20.26■□□□□ 0.83
UBC-208ENST00000540700 ADGRA1Q86SQ6 560 aa20.26■□□□□ 0.83
UBC-208ENST00000540700 ZGPATQ8N5A5 531 aaKnown RBP20.26■□□□□ 0.83
UBC-208ENST00000540700 MAST2Q6P0Q8 1798 aa20.26■□□□□ 0.83
UBC-208ENST00000540700 POTEFA5A3E0 1075 aa20.25■□□□□ 0.83
UBC-208ENST00000540700 IDH1O75874 414 aaKnown RBP20.25■□□□□ 0.83
UBC-208ENST00000540700 CRKP46108 304 aa20.25■□□□□ 0.83
UBC-208ENST00000540700 RGS3P49796 1198 aa20.25■□□□□ 0.83
UBC-208ENST00000540700 CFHR5Q9BXR6 569 aa20.25■□□□□ 0.83
UBC-208ENST00000540700 RAI14Q9P0K7 980 aa20.25■□□□□ 0.83
UBC-208ENST00000540700 LRP2BPQ9P2M1 347 aa20.25■□□□□ 0.83
UBC-208ENST00000540700 CFAP100Q494V2 611 aa20.24■□□□□ 0.83
UBC-208ENST00000540700 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
UBC-208ENST00000540700 DAGLAQ9Y4D2 1042 aa20.24■□□□□ 0.83
UBC-208ENST00000540700 GAKO14976 1311 aa20.24■□□□□ 0.83
UBC-208ENST00000540700 TCRBV5S4A2TA0A5A2 114 aa20.23■□□□□ 0.83
UBC-208ENST00000540700 ALDH1A1P00352 501 aa20.23■□□□□ 0.83
UBC-208ENST00000540700 TTF1Q15361 905 aaPredicted RBP20.23■□□□□ 0.83
UBC-208ENST00000540700 LDLRAD1Q5T700 205 aa20.23■□□□□ 0.83
UBC-208ENST00000540700 SPTY2D1Q68D10 685 aaPredicted RBP20.23■□□□□ 0.83
UBC-208ENST00000540700 APOBEC3HQ6NTF7 200 aaKnown RBP20.23■□□□□ 0.83
UBC-208ENST00000540700 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
UBC-208ENST00000540700 APOBEC3FQ8IUX4 373 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms