RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 H0YHG0 523 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 CMA1P23946 247 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 OSBP2Q969R2 916 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 XAGE2Q96GT9 111 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 CTAGE15A4D2H0 777 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 TUBB4AP04350 444 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 CTAGE8P0CG41 777 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 EIF5P55010 431 aaKnown RBP14.8□□□□□ -0.04
MSH6-210ENST00000540021 NYAP1Q6ZVC0 841 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 CTAGE6Q86UF2 777 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 CTAGE4Q8IX94 777 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 AKR1B15C9JRZ8 316 aaPredicted RBP14.8□□□□□ -0.04
MSH6-210ENST00000540021 ADORA1P30542 326 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 SLC4A8Q2Y0W8 1093 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 CABP5Q9NP86 173 aa14.8□□□□□ -0.04
MSH6-210ENST00000540021 ANGEL1Q9UNK9 670 aaKnown RBP14.8□□□□□ -0.04
MSH6-210ENST00000540021 CEP170BQ9Y4F5 1589 aaPredicted RBP14.79□□□□□ -0.04
MSH6-210ENST00000540021 CTAGE9A4FU28 777 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 EFCAB8A8MWE9 144 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 IBSPP21815 317 aaPredicted RBP14.79□□□□□ -0.04
MSH6-210ENST00000540021 GTF2E1P29083 439 aaPredicted RBP14.79□□□□□ -0.04
MSH6-210ENST00000540021 TTLL7Q6ZT98 887 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 GPIHBP1Q8IV16 184 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 MPHOSPH8Q99549 860 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 SERTAD1Q9UHV2 236 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 TBX22Q9Y458 520 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 USP42Q9H9J4 1324 aaKnown RBP14.79□□□□□ -0.04
MSH6-210ENST00000540021 OVOS2A0A0J9YW53 1432 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 OVOS2Q6IE36 1432 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 A0A1W2PQ27 194 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 A0A1W2PQ64 194 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 A0A1W2PQD8 194 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 CTDNEP1O95476 244 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 ATF3P18847 181 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 SPECC1LQ69YQ0 1117 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 ANKLE2Q86XL3 938 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 DIS3L2Q8IYB7 885 aaKnown RBP14.79□□□□□ -0.04
MSH6-210ENST00000540021 RASSF4Q9H2L5 321 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 SLC52A2Q9HAB3 445 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 MAGEC2Q9UBF1 373 aaPredicted RBP14.79□□□□□ -0.04
MSH6-210ENST00000540021 IFT172Q9UG01 1749 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 FKBP15Q5T1M5 1219 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 KAZALD1Q96I82 304 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 DRC1Q96MC2 740 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 TSPYL1Q9H0U9 437 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 VPS16Q9H269 839 aa14.79□□□□□ -0.04
MSH6-210ENST00000540021 RANBP6O60518 1105 aaKnown RBP14.78□□□□□ -0.04
MSH6-210ENST00000540021 ZFYP08048 801 aaPredicted RBP14.78□□□□□ -0.04
MSH6-210ENST00000540021 PDE4CQ08493 712 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 NUTM2AQ8IVF1 878 aaPredicted RBP14.78□□□□□ -0.04
MSH6-210ENST00000540021 DHX37Q8IY37 1157 aaKnown RBP14.78□□□□□ -0.04
MSH6-210ENST00000540021 CEP131Q9UPN4 1083 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 BTBD18B2RXH4 712 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 ANKRD65E5RJM6 399 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 RRAGBQ5VZM2 374 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 MFSD6Q6ZSS7 791 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 CCDC148Q8NFR7 591 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 SMARCC2Q8TAQ2 1214 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 SMARCC1Q92922 1105 aaPredicted RBP14.78□□□□□ -0.04
MSH6-210ENST00000540021 ZNHIT6Q9NWK9 470 aaKnown RBP14.78□□□□□ -0.04
MSH6-210ENST00000540021 IRX5P78411 483 aaPredicted RBP14.78□□□□□ -0.04
MSH6-210ENST00000540021 ZMYM1Q5SVZ6 1142 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 CERS3Q8IU89 383 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 PARD6BQ9BYG5 372 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 IRX2Q9BZI1 471 aaPredicted RBP14.78□□□□□ -0.04
MSH6-210ENST00000540021 GBP3Q9H0R5 595 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 CDC42BPGQ6DT37 1551 aa14.78□□□□□ -0.04
MSH6-210ENST00000540021 KIF23Q02241 960 aaPredicted RBP14.77□□□□□ -0.04
MSH6-210ENST00000540021 POSTNQ15063 836 aa14.77□□□□□ -0.04
MSH6-210ENST00000540021 RTN1Q16799 776 aa14.77□□□□□ -0.04
MSH6-210ENST00000540021 OSBPL5Q9H0X9 879 aaPredicted RBP14.77□□□□□ -0.04
MSH6-210ENST00000540021 CENPHQ9H3R5 247 aa14.77□□□□□ -0.04
MSH6-210ENST00000540021 PDE11AQ9HCR9 933 aa14.77□□□□□ -0.04
MSH6-210ENST00000540021 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
MSH6-210ENST00000540021 CTDSPL2Q05D32 466 aa14.77□□□□□ -0.04
MSH6-210ENST00000540021 WTAPQ15007 396 aa14.77□□□□□ -0.04
MSH6-210ENST00000540021 DNAJC21Q5F1R6 531 aaKnown RBP14.77□□□□□ -0.04
MSH6-210ENST00000540021 GPR161Q8N6U8 529 aaKnown RBP14.77□□□□□ -0.04
MSH6-210ENST00000540021 MIGA1Q8NAN2 632 aa14.77□□□□□ -0.04
MSH6-210ENST00000540021 ZNF609O15014 1411 aa14.77□□□□□ -0.05
MSH6-210ENST00000540021 WWC2Q6AWC2 1192 aa14.77□□□□□ -0.05
MSH6-210ENST00000540021 POLR3EQ9NVU0 708 aa14.77□□□□□ -0.05
MSH6-210ENST00000540021 FOXN1O15353 648 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 PPARDQ03181 441 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 SLC39A14Q15043 492 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 APPBP2Q92624 585 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 DLC1Q96QB1 1528 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 KIF28PB7ZC32 967 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 TXLNAP40222 546 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 ST5P78524 1137 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 CTR9Q6PD62 1173 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 TOGARAM2Q6ZUX3 1019 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
MSH6-210ENST00000540021 PLBD2Q8NHP8 589 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 DDX17Q92841 729 aaKnown RBP14.76□□□□□ -0.05
MSH6-210ENST00000540021 DEF6Q9H4E7 631 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 JADE2Q9NQC1 790 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 PRDM11Q9NQV5 511 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 SAMSN1Q9NSI8 373 aaKnown RBP14.76□□□□□ -0.05
MSH6-210ENST00000540021 TRMT112Q9UI30 125 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms