RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 MICALL1Q8N3F8 863 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 LSM14AQ8ND56 463 aaKnown RBP14.65□□□□□ -0.06
DDX55-206ENST00000539934 OTUD7AQ8TE49 926 aaPredicted RBP14.65□□□□□ -0.06
DDX55-206ENST00000539934 TBC1D32Q96NH3 1257 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 TRERF1Q96PN7 1200 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 C22orf23Q9BZE7 217 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 ZC3H4Q9UPT8 1303 aaKnown RBP14.65□□□□□ -0.06
DDX55-206ENST00000539934 MYO1CO00159 1063 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 SRGAP3O43295 1099 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 PPFIA4O75335 1185 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 ECEL1O95672 775 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 LBX1P52954 281 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 GYS2P54840 703 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 SYCP1Q15431 976 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 TTC22Q5TAA0 569 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 SSH3Q8TE77 659 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 PDLIM2Q96JY6 352 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 AGAP3Q96P47 875 aa14.64□□□□□ -0.07
DDX55-206ENST00000539934 GSPT1P15170 499 aaKnown RBP14.64□□□□□ -0.07
DDX55-206ENST00000539934 ERICH4A6NGS2 130 aa14.63□□□□□ -0.07
DDX55-206ENST00000539934 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
DDX55-206ENST00000539934 VEGFBP49765 207 aa14.63□□□□□ -0.07
DDX55-206ENST00000539934 SART3Q15020 963 aaKnown RBP14.63□□□□□ -0.07
DDX55-206ENST00000539934 EAPPQ56P03 285 aaPredicted RBP14.63□□□□□ -0.07
DDX55-206ENST00000539934 ANKRD13DQ6ZTN6 518 aa14.63□□□□□ -0.07
DDX55-206ENST00000539934 TMX4Q9H1E5 349 aaPredicted RBP14.63□□□□□ -0.07
DDX55-206ENST00000539934 VEZTQ9HBM0 779 aa14.63□□□□□ -0.07
DDX55-206ENST00000539934 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
DDX55-206ENST00000539934 ARFGEF2Q9Y6D5 1785 aa14.63□□□□□ -0.07
DDX55-206ENST00000539934 GRM8O00222 908 aa14.62□□□□□ -0.07
DDX55-206ENST00000539934 KRT222Q8N1A0 295 aa14.62□□□□□ -0.07
DDX55-206ENST00000539934 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
DDX55-206ENST00000539934 CDC45O75419 566 aa14.62□□□□□ -0.07
DDX55-206ENST00000539934 SURF6O75683 361 aaKnown RBP14.62□□□□□ -0.07
DDX55-206ENST00000539934 POLA2Q14181 598 aa14.62□□□□□ -0.07
DDX55-206ENST00000539934 TTC31Q49AM3 519 aaPredicted RBP14.62□□□□□ -0.07
DDX55-206ENST00000539934 LRP10Q7Z4F1 713 aa14.62□□□□□ -0.07
DDX55-206ENST00000539934 MYD88Q99836 296 aa14.62□□□□□ -0.07
DDX55-206ENST00000539934 NPHP1O15259 732 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 OLFM4Q6UX06 510 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 METTL22Q9BUU2 404 aaPredicted RBP14.61□□□□□ -0.07
DDX55-206ENST00000539934 CACNA1SQ13698 1873 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 IGKV5-2P06315 115 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 RWDD2BP57060 319 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 IFT88Q13099 833 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 NOM1Q5C9Z4 860 aaKnown RBP14.61□□□□□ -0.07
DDX55-206ENST00000539934 TBC1D9Q6ZT07 1266 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 UBA5Q9GZZ9 404 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 TAOK3Q9H2K8 898 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 ARHGEF10LQ9HCE6 1279 aa14.61□□□□□ -0.07
DDX55-206ENST00000539934 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 IPO5O00410 1097 aaKnown RBP14.6□□□□□ -0.07
DDX55-206ENST00000539934 RAB11FIP3O75154 756 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 PDCD2Q16342 344 aaPredicted RBP14.6□□□□□ -0.07
DDX55-206ENST00000539934 PRR5LQ6MZQ0 368 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 IRF2BPLQ9H1B7 796 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 DLEC1Q9Y238 1755 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 NRXN2Q9P2S2 1712 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 NEURL1BA8MQ27 555 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 PDE1AP54750 535 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 PSMC1P62191 440 aaKnown RBP14.6□□□□□ -0.07
DDX55-206ENST00000539934 GRM1Q13255 1194 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 FAXDC2Q96IV6 333 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
DDX55-206ENST00000539934 ANKRD31Q8N7Z5 1873 aa14.59□□□□□ -0.07
DDX55-206ENST00000539934 UTYO14607 1347 aa14.59□□□□□ -0.07
DDX55-206ENST00000539934 KIF4AO95239 1232 aa14.59□□□□□ -0.07
DDX55-206ENST00000539934 MTX1Q13505 466 aa14.59□□□□□ -0.07
DDX55-206ENST00000539934 CCDC26Q8TAB7 109 aa14.59□□□□□ -0.07
DDX55-206ENST00000539934 AIDAQ96BJ3 306 aa14.59□□□□□ -0.07
DDX55-206ENST00000539934 KIF2CQ99661 725 aa14.59□□□□□ -0.07
DDX55-206ENST00000539934 OSBPL3Q9H4L5 887 aa14.59□□□□□ -0.07
DDX55-206ENST00000539934 SLX4Q8IY92 1834 aa14.58□□□□□ -0.07
DDX55-206ENST00000539934 NBPF26B4DH59 902 aa14.58□□□□□ -0.07
DDX55-206ENST00000539934 OATP04181 439 aa14.58□□□□□ -0.07
DDX55-206ENST00000539934 RABEP1Q15276 862 aa14.58□□□□□ -0.07
DDX55-206ENST00000539934 NBPF15Q8N660 670 aa14.58□□□□□ -0.07
DDX55-206ENST00000539934 IL1RAPL2Q9NP60 686 aa14.58□□□□□ -0.07
DDX55-206ENST00000539934 ZNF446Q9NWS9 450 aa14.58□□□□□ -0.07
DDX55-206ENST00000539934 COL11A2P13942 1736 aaPredicted RBP14.58□□□□□ -0.07
DDX55-206ENST00000539934 RBM47A0AV96 593 aaKnown RBP14.58□□□□□ -0.08
DDX55-206ENST00000539934 CTIFO43310 598 aaKnown RBP14.58□□□□□ -0.08
DDX55-206ENST00000539934 MX1P20591 662 aa14.58□□□□□ -0.08
DDX55-206ENST00000539934 FMR1Q06787 632 aaKnown RBP eCLIP14.58□□□□□ -0.08
DDX55-206ENST00000539934 GCKRQ14397 625 aa14.58□□□□□ -0.08
DDX55-206ENST00000539934 PRPF40BQ6NWY9 871 aaKnown RBP14.58□□□□□ -0.08
DDX55-206ENST00000539934 GAS2L3Q86XJ1 694 aa14.58□□□□□ -0.08
DDX55-206ENST00000539934 PLBD2Q8NHP8 589 aa14.58□□□□□ -0.08
DDX55-206ENST00000539934 SUCLG2Q96I99 432 aa14.58□□□□□ -0.08
DDX55-206ENST00000539934 SH3GL3Q99963 347 aa14.58□□□□□ -0.08
DDX55-206ENST00000539934 FAM53CQ9NYF3 392 aa14.58□□□□□ -0.08
DDX55-206ENST00000539934 BLOC1S6Q9UL45 172 aa14.58□□□□□ -0.08
DDX55-206ENST00000539934 A1BGP04217 495 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 IMPDH2P12268 514 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 SDSP20132 328 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 CTCFP49711 727 aaPredicted RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 MAP1SQ66K74 1059 aaPredicted RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 TTC19Q6DKK2 380 aaPredicted RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 C10orf67Q8IYJ2 551 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 KIF1BPQ96EK5 621 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms