RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CETPP11597 493 aa18.73■□□□□ 0.59
USB1-203ENST00000539737 NFIAQ12857 509 aa18.73■□□□□ 0.59
USB1-203ENST00000539737 CHRDL2Q6WN34 429 aa18.73■□□□□ 0.59
USB1-203ENST00000539737 ERO1BQ86YB8 467 aa18.73■□□□□ 0.59
USB1-203ENST00000539737 TRIM47Q96LD4 638 aa18.73■□□□□ 0.59
USB1-203ENST00000539737 PPIL2Q13356 520 aa18.72■□□□□ 0.59
USB1-203ENST00000539737 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
USB1-203ENST00000539737 ZFPM1Q8IX07 1006 aa18.72■□□□□ 0.59
USB1-203ENST00000539737 ZDHHC15Q96MV8 337 aa18.72■□□□□ 0.59
USB1-203ENST00000539737 AK9Q5TCS8 1911 aa18.72■□□□□ 0.59
USB1-203ENST00000539737 MYH13Q9UKX3 1938 aa18.71■□□□□ 0.59
USB1-203ENST00000539737 SNAPC2Q13487 334 aa18.71■□□□□ 0.59
USB1-203ENST00000539737 MOGSQ13724 837 aa18.71■□□□□ 0.59
USB1-203ENST00000539737 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
USB1-203ENST00000539737 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.71■□□□□ 0.59
USB1-203ENST00000539737 PDHXO00330 501 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 PDE8BO95263 885 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 CYP2C8P10632 490 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 OSBPP22059 807 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 PSMC4P43686 418 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 ALDH1L2Q3SY69 923 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 CAVIN4Q5BKX8 364 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 C17orf99Q6UX52 265 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 UTYO14607 1347 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 ADGRA2Q96PE1 1338 aa18.7■□□□□ 0.58
USB1-203ENST00000539737 FGFR2P21802 821 aa18.69■□□□□ 0.58
USB1-203ENST00000539737 CDC42EP5Q6NZY7 148 aa18.69■□□□□ 0.58
USB1-203ENST00000539737 MRPL50Q8N5N7 158 aaKnown RBP18.69■□□□□ 0.58
USB1-203ENST00000539737 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
USB1-203ENST00000539737 DAGLAQ9Y4D2 1042 aa18.69■□□□□ 0.58
USB1-203ENST00000539737 PRDX5P30044 214 aa18.68■□□□□ 0.58
USB1-203ENST00000539737 HDLBPQ00341 1268 aaKnown RBP18.68■□□□□ 0.58
USB1-203ENST00000539737 KIF22Q14807 665 aa18.68■□□□□ 0.58
USB1-203ENST00000539737 CCDC84Q86UT8 332 aaPredicted RBP18.68■□□□□ 0.58
USB1-203ENST00000539737 TBC1D22AQ8WUA7 517 aa18.68■□□□□ 0.58
USB1-203ENST00000539737 RBM27Q9P2N5 1060 aaKnown RBP18.68■□□□□ 0.58
USB1-203ENST00000539737 FAM198AQ9UFP1 575 aa18.68■□□□□ 0.58
USB1-203ENST00000539737 GABRQQ9UN88 632 aa18.68■□□□□ 0.58
USB1-203ENST00000539737 FMNL1O95466 1100 aaPredicted RBP18.67■□□□□ 0.58
USB1-203ENST00000539737 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
USB1-203ENST00000539737 PRKCZQ05513 592 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 FAM83AQ86UY5 434 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 DPF3Q92784 378 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 SIL1Q9H173 461 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 SRRDQ9UH36 339 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 PTPRCP08575 1304 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 LAMA3Q16787 3333 aa18.67■□□□□ 0.58
USB1-203ENST00000539737 CCL5P13501 91 aa18.66■□□□□ 0.58
USB1-203ENST00000539737 ARHGEF6Q15052 776 aa18.66■□□□□ 0.58
USB1-203ENST00000539737 PUM3Q15397 648 aaKnown RBP18.66■□□□□ 0.58
USB1-203ENST00000539737 GPAT2Q6NUI2 795 aa18.66■□□□□ 0.58
USB1-203ENST00000539737 USP44Q9H0E7 712 aa18.66■□□□□ 0.58
USB1-203ENST00000539737 PPATQ06203 517 aa18.65■□□□□ 0.58
USB1-203ENST00000539737 DCAF15Q66K64 600 aa18.65■□□□□ 0.58
USB1-203ENST00000539737 RAET1EQ8TD07 263 aa18.65■□□□□ 0.58
USB1-203ENST00000539737 UNC93B1Q9H1C4 597 aa18.65■□□□□ 0.58
USB1-203ENST00000539737 RPAP1Q9BWH6 1393 aaPredicted RBP18.65■□□□□ 0.58
USB1-203ENST00000539737 MGAMO43451 1857 aa18.65■□□□□ 0.58
USB1-203ENST00000539737 IFIT1P09914 478 aaKnown RBP18.64■□□□□ 0.57
USB1-203ENST00000539737 ELNP15502 786 aa18.64■□□□□ 0.57
USB1-203ENST00000539737 GRK4P32298 578 aa18.64■□□□□ 0.57
USB1-203ENST00000539737 HHIPL2Q6UWX4 724 aa18.64■□□□□ 0.57
USB1-203ENST00000539737 ATG9AQ7Z3C6 839 aa18.64■□□□□ 0.57
USB1-203ENST00000539737 ANKRD23Q86SG2 305 aa18.64■□□□□ 0.57
USB1-203ENST00000539737 FAM151AQ8WW52 585 aa18.64■□□□□ 0.57
USB1-203ENST00000539737 USP40Q9NVE5 1235 aa18.64■□□□□ 0.57
USB1-203ENST00000539737 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
USB1-203ENST00000539737 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
USB1-203ENST00000539737 EYA2O00167 538 aa18.63■□□□□ 0.57
USB1-203ENST00000539737 ADORA1P30542 326 aa18.63■□□□□ 0.57
USB1-203ENST00000539737 SH3BP5LQ7L8J4 393 aa18.63■□□□□ 0.57
USB1-203ENST00000539737 RNF208Q9H0X6 261 aa18.63■□□□□ 0.57
USB1-203ENST00000539737 ZNF112Q9UJU3 913 aa18.63■□□□□ 0.57
USB1-203ENST00000539737 DOCK2Q92608 1830 aa18.63■□□□□ 0.57
USB1-203ENST00000539737 WDHD1O75717 1129 aaPredicted RBP18.62■□□□□ 0.57
USB1-203ENST00000539737 SLC5A1P13866 664 aa18.62■□□□□ 0.57
USB1-203ENST00000539737 PHKA1P46020 1223 aa18.62■□□□□ 0.57
USB1-203ENST00000539737 FKBP1CQ5VVH2 108 aa18.62■□□□□ 0.57
USB1-203ENST00000539737 UBE2Q1Q7Z7E8 422 aa18.62■□□□□ 0.57
USB1-203ENST00000539737 ZCCHC17Q9NP64 241 aaKnown RBP18.62■□□□□ 0.57
USB1-203ENST00000539737 PA2G4Q9UQ80 394 aaKnown RBP18.62■□□□□ 0.57
USB1-203ENST00000539737 ATRNL1Q5VV63 1379 aa18.62■□□□□ 0.57
USB1-203ENST00000539737 MAST3O60307 1309 aa18.61■□□□□ 0.57
USB1-203ENST00000539737 KIF16BQ96L93 1317 aa18.61■□□□□ 0.57
USB1-203ENST00000539737 BCRP11274 1271 aa18.61■□□□□ 0.57
USB1-203ENST00000539737 RARSP54136 660 aaKnown RBP18.61■□□□□ 0.57
USB1-203ENST00000539737 GADL1Q6ZQY3 521 aa18.61■□□□□ 0.57
USB1-203ENST00000539737 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
USB1-203ENST00000539737 GJA8P48165 433 aa18.6■□□□□ 0.57
USB1-203ENST00000539737 RGS3P49796 1198 aa18.6■□□□□ 0.57
USB1-203ENST00000539737 MRIQ9BWK5 157 aa18.6■□□□□ 0.57
USB1-203ENST00000539737 TAOK2Q9UL54 1235 aa18.6■□□□□ 0.57
USB1-203ENST00000539737 ZHX2Q9Y6X8 837 aa18.6■□□□□ 0.57
USB1-203ENST00000539737 DOCK3Q8IZD9 2030 aa18.6■□□□□ 0.57
USB1-203ENST00000539737 MYH2Q9UKX2 1941 aa18.6■□□□□ 0.57
USB1-203ENST00000539737 PTPRFP10586 1907 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms