RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 MTFR1Q15390 333 aa17.61■□□□□ 0.41
SMARCA4-206ENST00000538456 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-206ENST00000538456 UTYO14607 1347 aa17.61■□□□□ 0.41
SMARCA4-206ENST00000538456 RPAP1Q9BWH6 1393 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-206ENST00000538456 RANBP2P49792 3224 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-206ENST00000538456 CTGFP29279 349 aa17.6■□□□□ 0.41
SMARCA4-206ENST00000538456 FKBP1CQ5VVH2 108 aa17.6■□□□□ 0.41
SMARCA4-206ENST00000538456 TRIM47Q96LD4 638 aa17.6■□□□□ 0.41
SMARCA4-206ENST00000538456 ZNF341Q9BYN7 854 aa17.6■□□□□ 0.41
SMARCA4-206ENST00000538456 PDHXO00330 501 aa17.59■□□□□ 0.41
SMARCA4-206ENST00000538456 PSMC4P43686 418 aa17.59■□□□□ 0.41
SMARCA4-206ENST00000538456 PRMT2P55345 433 aa17.59■□□□□ 0.41
SMARCA4-206ENST00000538456 PPATQ06203 517 aa17.59■□□□□ 0.41
SMARCA4-206ENST00000538456 TCP10Q12799 353 aa17.59■□□□□ 0.41
SMARCA4-206ENST00000538456 PUM3Q15397 648 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-206ENST00000538456 C17orf99Q6UX52 265 aa17.59■□□□□ 0.41
SMARCA4-206ENST00000538456 SHISA4Q96DD7 197 aa17.59■□□□□ 0.41
SMARCA4-206ENST00000538456 FMNL1O95466 1100 aaPredicted RBP17.58■□□□□ 0.4
SMARCA4-206ENST00000538456 IFIT1P09914 478 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-206ENST00000538456 HHIPL2Q6UWX4 724 aa17.58■□□□□ 0.4
SMARCA4-206ENST00000538456 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
SMARCA4-206ENST00000538456 RAET1EQ8TD07 263 aa17.58■□□□□ 0.4
SMARCA4-206ENST00000538456 MRIQ9BWK5 157 aa17.58■□□□□ 0.4
SMARCA4-206ENST00000538456 SRRDQ9UH36 339 aa17.58■□□□□ 0.4
SMARCA4-206ENST00000538456 SUGT1Q9Y2Z0 365 aa17.58■□□□□ 0.4
SMARCA4-206ENST00000538456 MGAMO43451 1857 aa17.57■□□□□ 0.4
SMARCA4-206ENST00000538456 OSBPP22059 807 aa17.57■□□□□ 0.4
SMARCA4-206ENST00000538456 ANKRD23Q86SG2 305 aa17.57■□□□□ 0.4
SMARCA4-206ENST00000538456 FAM151AQ8WW52 585 aa17.57■□□□□ 0.4
SMARCA4-206ENST00000538456 DPF3Q92784 378 aa17.57■□□□□ 0.4
SMARCA4-206ENST00000538456 MYPNQ86TC9 1320 aa17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 ADGRA2Q96PE1 1338 aa17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 FGFR2P21802 821 aa17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 GRK4P32298 578 aa17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 ZEB1P37275 1124 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 DIXDC1Q155Q3 683 aa17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 DAGLAQ9Y4D2 1042 aa17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 DOCK2Q92608 1830 aa17.56■□□□□ 0.4
SMARCA4-206ENST00000538456 KIF16BQ96L93 1317 aa17.55■□□□□ 0.4
SMARCA4-206ENST00000538456 SLC5A1P13866 664 aa17.55■□□□□ 0.4
SMARCA4-206ENST00000538456 HOXD10P28358 340 aa17.55■□□□□ 0.4
SMARCA4-206ENST00000538456 NFIAQ12857 509 aa17.55■□□□□ 0.4
SMARCA4-206ENST00000538456 CDC42EP5Q6NZY7 148 aa17.55■□□□□ 0.4
SMARCA4-206ENST00000538456 WDR66Q8TBY9 1149 aa17.55■□□□□ 0.4
SMARCA4-206ENST00000538456 KCNH4Q9UQ05 1017 aa17.55■□□□□ 0.4
SMARCA4-206ENST00000538456 CCL5P13501 91 aa17.54■□□□□ 0.4
SMARCA4-206ENST00000538456 MOGSQ13724 837 aa17.54■□□□□ 0.4
SMARCA4-206ENST00000538456 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
SMARCA4-206ENST00000538456 ZNF112Q9UJU3 913 aa17.54■□□□□ 0.4
SMARCA4-206ENST00000538456 ANP32CO43423 234 aa17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 CYP2C8P10632 490 aa17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 PRDX5P30044 214 aa17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 PRKCZQ05513 592 aa17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 PARK7Q99497 189 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 RNF208Q9H0X6 261 aa17.53■□□□□ 0.4
SMARCA4-206ENST00000538456 EYA2O00167 538 aa17.52■□□□□ 0.4
SMARCA4-206ENST00000538456 GJA8P48165 433 aa17.52■□□□□ 0.4
SMARCA4-206ENST00000538456 FCGRTP55899 365 aa17.52■□□□□ 0.4
SMARCA4-206ENST00000538456 NOL9Q5SY16 702 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-206ENST00000538456 LPIN2Q92539 896 aa17.52■□□□□ 0.4
SMARCA4-206ENST00000538456 USP44Q9H0E7 712 aa17.52■□□□□ 0.4
SMARCA4-206ENST00000538456 FAM198AQ9UFP1 575 aa17.52■□□□□ 0.4
SMARCA4-206ENST00000538456 MYH2Q9UKX2 1941 aa17.52■□□□□ 0.4
SMARCA4-206ENST00000538456 PTPRFP10586 1907 aa17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 LDHBP07195 334 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 GJB1P08034 283 aa17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 UBXN2AP68543 259 aa17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 ZFPM1Q8IX07 1006 aa17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 HTATIP2Q9BUP3 242 aa17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 SIL1Q9H173 461 aa17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 USP40Q9NVE5 1235 aa17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 GABRQQ9UN88 632 aa17.51■□□□□ 0.39
SMARCA4-206ENST00000538456 PTPRCP08575 1304 aa17.5■□□□□ 0.39
SMARCA4-206ENST00000538456 BCRP11274 1271 aa17.5■□□□□ 0.39
SMARCA4-206ENST00000538456 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-206ENST00000538456 GPAT2Q6NUI2 795 aa17.5■□□□□ 0.39
SMARCA4-206ENST00000538456 UBE2Q1Q7Z7E8 422 aa17.5■□□□□ 0.39
SMARCA4-206ENST00000538456 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
SMARCA4-206ENST00000538456 FARP2O94887 1054 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 ATP2B3Q16720 1220 aa17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 GADL1Q6ZQY3 521 aa17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 ATG9AQ7Z3C6 839 aa17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 SLAIN1Q8ND83 568 aa17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 U2AF1L4Q8WU68 220 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 PICK1Q9NRD5 415 aa17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 ZHX2Q9Y6X8 837 aa17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 DOCK1Q14185 1865 aa17.49■□□□□ 0.39
SMARCA4-206ENST00000538456 CXCL11O14625 94 aa17.48■□□□□ 0.39
SMARCA4-206ENST00000538456 ELNP15502 786 aa17.48■□□□□ 0.39
SMARCA4-206ENST00000538456 SCYL3Q8IZE3 742 aa17.48■□□□□ 0.39
SMARCA4-206ENST00000538456 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
SMARCA4-206ENST00000538456 GNL3LQ9NVN8 582 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-206ENST00000538456 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
SMARCA4-206ENST00000538456 LAMA3Q16787 3333 aa17.48■□□□□ 0.39
SMARCA4-206ENST00000538456 PHIPQ8WWQ0 1821 aa17.47■□□□□ 0.39
SMARCA4-206ENST00000538456 A0A0G2JLL6 359 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms