RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 VPS53Q5VIR6 699 aa24.62■■□□□ 1.53
COPS7A-208ENST00000538410 USP50Q70EL3 339 aaPredicted RBP24.62■■□□□ 1.53
COPS7A-208ENST00000538410 SUGT1Q9Y2Z0 365 aa24.62■■□□□ 1.53
COPS7A-208ENST00000538410 RBM8AQ9Y5S9 174 aaKnown RBP24.62■■□□□ 1.53
COPS7A-208ENST00000538410 FKBP1AP62942 108 aaKnown RBP24.61■■□□□ 1.53
COPS7A-208ENST00000538410 GSTO1P78417 241 aa24.61■■□□□ 1.53
COPS7A-208ENST00000538410 CERS5Q8N5B7 392 aa24.61■■□□□ 1.53
COPS7A-208ENST00000538410 STRBPQ96SI9 672 aaKnown RBP24.61■■□□□ 1.53
COPS7A-208ENST00000538410 PASKQ96RG2 1323 aa24.61■■□□□ 1.53
COPS7A-208ENST00000538410 USP17L3A6NCW0 530 aa24.61■■□□□ 1.53
COPS7A-208ENST00000538410 USP17L4A6NCW7 530 aa24.61■■□□□ 1.53
COPS7A-208ENST00000538410 MBD4O95243 580 aa24.61■■□□□ 1.53
COPS7A-208ENST00000538410 ITGBL1O95965 494 aaPredicted RBP24.61■■□□□ 1.53
COPS7A-208ENST00000538410 MAP1SQ66K74 1059 aaPredicted RBP24.61■■□□□ 1.53
COPS7A-208ENST00000538410 USP17L1Q7RTZ2 530 aa24.61■■□□□ 1.53
COPS7A-208ENST00000538410 MIGA1Q8NAN2 632 aa24.61■■□□□ 1.53
COPS7A-208ENST00000538410 ADARB2Q9NS39 739 aaKnown RBP24.61■■□□□ 1.53
COPS7A-208ENST00000538410 MAGEB6P1A0A0J9YX57 407 aa24.6■■□□□ 1.53
COPS7A-208ENST00000538410 NECTIN1Q15223 517 aa24.6■■□□□ 1.53
COPS7A-208ENST00000538410 DACT2Q5SW24 774 aa24.6■■□□□ 1.53
COPS7A-208ENST00000538410 KIF2CQ99661 725 aa24.6■■□□□ 1.53
COPS7A-208ENST00000538410 ARMT1Q9H993 441 aa24.6■■□□□ 1.53
COPS7A-208ENST00000538410 U3KPZ7 1027 aaPredicted RBP24.6■■□□□ 1.53
COPS7A-208ENST00000538410 CDK5RAP2Q96SN8 1893 aa24.59■■□□□ 1.53
COPS7A-208ENST00000538410 ANP32AP39687 249 aaKnown RBP24.59■■□□□ 1.53
COPS7A-208ENST00000538410 ANAPC15P60006 121 aa24.59■■□□□ 1.53
COPS7A-208ENST00000538410 LCORLQ8N3X6 602 aa24.59■■□□□ 1.53
COPS7A-208ENST00000538410 CREBZFQ9NS37 354 aa24.59■■□□□ 1.53
COPS7A-208ENST00000538410 PALD1Q9ULE6 856 aa24.59■■□□□ 1.53
COPS7A-208ENST00000538410 PSMD14O00487 310 aa24.58■■□□□ 1.53
COPS7A-208ENST00000538410 FOXP2O15409 715 aa24.58■■□□□ 1.53
COPS7A-208ENST00000538410 LDHCP07864 332 aa24.58■■□□□ 1.53
COPS7A-208ENST00000538410 RIOK1Q9BRS2 568 aaKnown RBP24.58■■□□□ 1.53
COPS7A-208ENST00000538410 MXD3Q9BW11 206 aa24.58■■□□□ 1.53
COPS7A-208ENST00000538410 LAMA4Q16363 1823 aa24.58■■□□□ 1.53
COPS7A-208ENST00000538410 GNAT2P19087 354 aa24.57■■□□□ 1.52
COPS7A-208ENST00000538410 DIXDC1Q155Q3 683 aa24.57■■□□□ 1.52
COPS7A-208ENST00000538410 KCNB2Q92953 911 aa24.57■■□□□ 1.52
COPS7A-208ENST00000538410 IL17RAQ96F46 866 aa24.57■■□□□ 1.52
COPS7A-208ENST00000538410 MROH7-TTC4A0A0A0MT08 1334 aa24.57■■□□□ 1.52
COPS7A-208ENST00000538410 CREB3L3Q68CJ9 461 aa24.57■■□□□ 1.52
COPS7A-208ENST00000538410 SLF2Q8IX21 1173 aa24.57■■□□□ 1.52
COPS7A-208ENST00000538410 CNOT7Q9UIV1 285 aaKnown RBP24.57■■□□□ 1.52
COPS7A-208ENST00000538410 DYNLL1P63167 89 aaKnown RBP24.56■■□□□ 1.52
COPS7A-208ENST00000538410 FAM163AQ96GL9 167 aaPredicted RBP24.56■■□□□ 1.52
COPS7A-208ENST00000538410 ZBTB12Q9Y330 459 aaPredicted RBP24.56■■□□□ 1.52
COPS7A-208ENST00000538410 PATL2C9JE40 543 aaKnown RBP24.55■■□□□ 1.52
COPS7A-208ENST00000538410 H7C1D1 291 aa24.55■■□□□ 1.52
COPS7A-208ENST00000538410 SLC27A2O14975 620 aa24.55■■□□□ 1.52
COPS7A-208ENST00000538410 DPF2Q92785 391 aa24.55■■□□□ 1.52
COPS7A-208ENST00000538410 TTF2Q9UNY4 1162 aaKnown RBP24.55■■□□□ 1.52
COPS7A-208ENST00000538410 SNX14Q9Y5W7 946 aa24.55■■□□□ 1.52
COPS7A-208ENST00000538410 BAZ2AQ9UIF9 1905 aaKnown RBP24.55■■□□□ 1.52
COPS7A-208ENST00000538410 RNF20Q5VTR2 975 aa24.54■■□□□ 1.52
COPS7A-208ENST00000538410 RASEFQ8IZ41 740 aa24.54■■□□□ 1.52
COPS7A-208ENST00000538410 AATFQ9NY61 560 aaKnown RBP eCLIP24.54■■□□□ 1.52
COPS7A-208ENST00000538410 SLC4A4Q9Y6R1 1079 aa24.54■■□□□ 1.52
COPS7A-208ENST00000538410 FOCADQ5VW36 1801 aa24.54■■□□□ 1.52
COPS7A-208ENST00000538410 ECM29Q5VYK3 1845 aa24.54■■□□□ 1.52
COPS7A-208ENST00000538410 RPAP1Q9BWH6 1393 aaPredicted RBP24.54■■□□□ 1.52
COPS7A-208ENST00000538410 TMEM88BA6NKF7 163 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 F8W031 263 aaPredicted RBP24.53■■□□□ 1.52
COPS7A-208ENST00000538410 FGAP02671 866 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 RPS12P25398 132 aaKnown RBP24.53■■□□□ 1.52
COPS7A-208ENST00000538410 MICALL2Q8IY33 904 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 JMYQ8N9B5 988 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 CTNNA3Q9UI47 895 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 GAKO14976 1311 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 GSG1L2A8MUP6 293 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 APPP05067 770 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 ZKSCAN1P17029 563 aaPredicted RBP24.53■■□□□ 1.52
COPS7A-208ENST00000538410 PPP4CP60510 307 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 ALX1Q15699 326 aa24.53■■□□□ 1.52
COPS7A-208ENST00000538410 NOL10Q9BSC4 688 aaKnown RBP24.53■■□□□ 1.52
COPS7A-208ENST00000538410 ZMYM6O95789 1325 aa24.52■■□□□ 1.52
COPS7A-208ENST00000538410 GPR75-ASB3A0A0A6YYF3 556 aa24.52■■□□□ 1.52
COPS7A-208ENST00000538410 PRKAB2O43741 272 aa24.52■■□□□ 1.52
COPS7A-208ENST00000538410 BAG3O95817 575 aa24.52■■□□□ 1.52
COPS7A-208ENST00000538410 VIL1P09327 827 aaKnown RBP24.52■■□□□ 1.52
COPS7A-208ENST00000538410 RABEP1Q15276 862 aa24.52■■□□□ 1.52
COPS7A-208ENST00000538410 IFNL3Q8IZI9 196 aa24.52■■□□□ 1.52
COPS7A-208ENST00000538410 MYO3BQ8WXR4 1341 aa24.52■■□□□ 1.52
COPS7A-208ENST00000538410 SHTN1A0MZ66 631 aa24.51■■□□□ 1.51
COPS7A-208ENST00000538410 TSGA10IPQ3SY00 556 aa24.51■■□□□ 1.51
COPS7A-208ENST00000538410 CERS3Q8IU89 383 aa24.51■■□□□ 1.51
COPS7A-208ENST00000538410 EPB41L4AQ9HCS5 686 aaPredicted RBP24.51■■□□□ 1.51
COPS7A-208ENST00000538410 CYP21A2P08686 494 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 RSBN1LQ6PCB5 846 aaPredicted RBP24.5■■□□□ 1.51
COPS7A-208ENST00000538410 KIAA0825Q8IV33 1275 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 MRIQ9BWK5 157 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 CRNKL1Q9BZJ0 848 aaKnown RBP24.5■■□□□ 1.51
COPS7A-208ENST00000538410 DAGLAQ9Y4D2 1042 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 NAV1Q8NEY1 1877 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 BTDP43251 543 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 HIRAP54198 1017 aaPredicted RBP24.5■■□□□ 1.51
COPS7A-208ENST00000538410 HHIPL2Q6UWX4 724 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 TRPM4Q8TD43 1214 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 ZC3H15Q8WU90 426 aaKnown RBP24.5■■□□□ 1.51
COPS7A-208ENST00000538410 NACAP1Q9BZK3 213 aa24.5■■□□□ 1.51
COPS7A-208ENST00000538410 MKRN1Q9UHC7 482 aaKnown RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms