RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 USP17L4A6NCW7 530 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 F11P03951 625 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 SERPINB2P05120 415 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 CYP19A1P11511 503 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-207ENST00000537965 PHKA2P46019 1235 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 RNFT1Q5M7Z0 435 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 USP17L2Q6R6M4 530 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 RIPOR1Q6ZS17 1223 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 USP17L1Q7RTZ2 530 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 DNAJC10Q8IXB1 793 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 TNS4Q8IZW8 715 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 ZNF837Q96EG3 531 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-207ENST00000537965 CNTNAP3BQ96NU0 1288 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 CNTNAP3Q9BZ76 1288 aa7.18□□□□□ -1.26
SNHG1-207ENST00000537965 SOS1Q07889 1333 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-207ENST00000537965 RNMTO43148 476 aaKnown RBP7.17□□□□□ -1.26
SNHG1-207ENST00000537965 IL13P35225 146 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 PDE6BP35913 854 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 PRELPP51888 382 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 NFIXQ14938 502 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 MTFR1Q15390 333 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 COL13A1Q5TAT6 717 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-207ENST00000537965 SOGA3Q5TF21 947 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 TRIM50Q86XT4 487 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 C2CD5Q86YS7 1000 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 AEBP1Q8IUX7 1158 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 TTC5Q8N0Z6 440 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 SERTAD1Q9UHV2 236 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 UBR2Q8IWV8 1755 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 COL15A1P39059 1388 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 ANKRD31Q8N7Z5 1873 aa7.17□□□□□ -1.26
SNHG1-207ENST00000537965 A6NJY4 79 aa7.16□□□□□ -1.26
SNHG1-207ENST00000537965 CDK2AP1O14519 115 aa7.16□□□□□ -1.26
SNHG1-207ENST00000537965 BACH1O14867 736 aa7.16□□□□□ -1.26
SNHG1-207ENST00000537965 ZBTB7BO15156 539 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-207ENST00000537965 NPHP1O15259 732 aa7.16□□□□□ -1.26
SNHG1-207ENST00000537965 HTRA3P83110 453 aa7.16□□□□□ -1.26
SNHG1-207ENST00000537965 CALR3Q96L12 384 aaKnown RBP7.16□□□□□ -1.26
SNHG1-207ENST00000537965 BRIP1Q9BX63 1249 aa7.16□□□□□ -1.26
SNHG1-207ENST00000537965 TFIP11Q9UBB9 837 aaKnown RBP7.16□□□□□ -1.26
SNHG1-207ENST00000537965 ARFGEF2Q9Y6D5 1785 aa7.15□□□□□ -1.26
SNHG1-207ENST00000537965 SLX4Q8IY92 1834 aa7.15□□□□□ -1.26
SNHG1-207ENST00000537965 HSPA5P11021 654 aaKnown RBP7.15□□□□□ -1.26
SNHG1-207ENST00000537965 ATP1A2P50993 1020 aa7.15□□□□□ -1.26
SNHG1-207ENST00000537965 RASSF7Q02833 373 aa7.15□□□□□ -1.26
SNHG1-207ENST00000537965 SLC39A6Q13433 755 aa7.15□□□□□ -1.26
SNHG1-207ENST00000537965 FOXR1Q6PIV2 292 aa7.15□□□□□ -1.26
SNHG1-207ENST00000537965 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.26
SNHG1-207ENST00000537965 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNHG1-207ENST00000537965 ZNF622Q969S3 477 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNHG1-207ENST00000537965 NIFKQ9BYG3 293 aaKnown RBP7.15□□□□□ -1.26
SNHG1-207ENST00000537965 LGR6Q9HBX8 967 aa7.15□□□□□ -1.26
SNHG1-207ENST00000537965 MKRN1Q9UHC7 482 aaKnown RBP7.15□□□□□ -1.26
SNHG1-207ENST00000537965 IQSEC3Q9UPP2 1182 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-207ENST00000537965 MRC1P22897 1456 aa7.15□□□□□ -1.27
SNHG1-207ENST00000537965 IQCA1LA6NCM1 817 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 PALM3A6NDB9 673 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 FAM181BA6NEQ2 426 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 SIPA1L3O60292 1781 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 DIAPH1O60610 1272 aaKnown RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 HSPA1AP0DMV8 641 aaKnown RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 HSPA1BP0DMV9 641 aaKnown RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 SLURP2P0DP57 97 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 CANXP27824 592 aaKnown RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 MSX1P28360 303 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 IL6STP40189 918 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 EIF5P55010 431 aaKnown RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 CLDN10P78369 228 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 TEFQ10587 303 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 GAS6Q14393 721 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 BICDL1Q6ZP65 573 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 GAS2L2Q8NHY3 880 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 GTPBP3Q969Y2 492 aaKnown RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 SETDB2Q96T68 719 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 PPP1R12CQ9BZL4 782 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 NUCKS1Q9H1E3 243 aaKnown RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 GPAMQ9HCL2 828 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 LTBP3Q9NS15 1303 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 ZNF358Q9NW07 568 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 ZBTB1Q9Y2K1 713 aa7.14□□□□□ -1.27
SNHG1-207ENST00000537965 MAFBQ9Y5Q3 323 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-207ENST00000537965 CARMIL3Q8ND23 1372 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 GNAT3A8MTJ3 354 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 C21orf2O43822 256 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 THBS1P07996 1170 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 HMOX1P09601 288 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 PLA2G4AP47712 749 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 ST5P78524 1137 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 LBRQ14739 615 aaKnown RBP7.13□□□□□ -1.27
SNHG1-207ENST00000537965 MTHFSDQ2M296 383 aaKnown RBP7.13□□□□□ -1.27
SNHG1-207ENST00000537965 CCDC102BQ68D86 513 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 STYK1Q6J9G0 422 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 LARGE2Q8N3Y3 721 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 TPCN2Q8NHX9 752 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 TAOK3Q9H2K8 898 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 DNAAF2Q9NVR5 837 aaKnown RBP7.13□□□□□ -1.27
SNHG1-207ENST00000537965 SCHIP1Q9P0W5 487 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-207ENST00000537965 KIAA1024Q9UPX6 916 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 TRPM7Q96QT4 1865 aa7.13□□□□□ -1.27
SNHG1-207ENST00000537965 SCN7AQ01118 1682 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms