RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 ZNF341Q9BYN7 854 aa26.71■■□□□ 1.87
SSH3-211ENST00000534112 EYA2O00167 538 aa26.7■■□□□ 1.86
SSH3-211ENST00000534112 RFX5P48382 616 aaPredicted RBP26.7■■□□□ 1.86
SSH3-211ENST00000534112 WDR66Q8TBY9 1149 aa26.7■■□□□ 1.86
SSH3-211ENST00000534112 LPIN2Q92539 896 aa26.7■■□□□ 1.86
SSH3-211ENST00000534112 RPAP1Q9BWH6 1393 aaPredicted RBP26.7■■□□□ 1.86
SSH3-211ENST00000534112 ZNF316A6NFI3 1004 aaPredicted RBP26.69■■□□□ 1.86
SSH3-211ENST00000534112 SLC5A1P13866 664 aa26.69■■□□□ 1.86
SSH3-211ENST00000534112 PPATQ06203 517 aa26.69■■□□□ 1.86
SSH3-211ENST00000534112 FAM151AQ8WW52 585 aa26.69■■□□□ 1.86
SSH3-211ENST00000534112 MYCP01106 439 aaPredicted RBP26.68■■□□□ 1.86
SSH3-211ENST00000534112 INPP5BP32019 993 aa26.68■■□□□ 1.86
SSH3-211ENST00000534112 SH3TC2Q8TF17 1288 aa26.68■■□□□ 1.86
SSH3-211ENST00000534112 RBBP6Q7Z6E9 1792 aaKnown RBP26.68■■□□□ 1.86
SSH3-211ENST00000534112 GNRH1P01148 92 aa26.67■■□□□ 1.86
SSH3-211ENST00000534112 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.67■■□□□ 1.86
SSH3-211ENST00000534112 DAGLAQ9Y4D2 1042 aa26.67■■□□□ 1.86
SSH3-211ENST00000534112 TCP10Q12799 353 aa26.66■■□□□ 1.86
SSH3-211ENST00000534112 CDC42EP5Q6NZY7 148 aa26.66■■□□□ 1.86
SSH3-211ENST00000534112 C17orf99Q6UX52 265 aa26.66■■□□□ 1.86
SSH3-211ENST00000534112 ATG9AQ7Z3C6 839 aa26.66■■□□□ 1.86
SSH3-211ENST00000534112 ZNF112Q9UJU3 913 aa26.66■■□□□ 1.86
SSH3-211ENST00000534112 E9PSI1 815 aa26.65■■□□□ 1.86
SSH3-211ENST00000534112 ZEB1P37275 1124 aaPredicted RBP26.65■■□□□ 1.86
SSH3-211ENST00000534112 DIXDC1Q155Q3 683 aa26.65■■□□□ 1.86
SSH3-211ENST00000534112 PRMT2P55345 433 aa26.64■■□□□ 1.86
SSH3-211ENST00000534112 NFIAQ12857 509 aa26.64■■□□□ 1.86
SSH3-211ENST00000534112 ANKRD23Q86SG2 305 aa26.64■■□□□ 1.86
SSH3-211ENST00000534112 CPA4Q9UI42 421 aa26.64■■□□□ 1.86
SSH3-211ENST00000534112 KCNH4Q9UQ05 1017 aa26.64■■□□□ 1.86
SSH3-211ENST00000534112 ECM2O94769 699 aaPredicted RBP26.63■■□□□ 1.85
SSH3-211ENST00000534112 PDHXO00330 501 aa26.62■■□□□ 1.85
SSH3-211ENST00000534112 CTGFP29279 349 aa26.62■■□□□ 1.85
SSH3-211ENST00000534112 PRDX5P30044 214 aa26.62■■□□□ 1.85
SSH3-211ENST00000534112 PSMC4P43686 418 aa26.61■■□□□ 1.85
SSH3-211ENST00000534112 SIL1Q9H173 461 aa26.61■■□□□ 1.85
SSH3-211ENST00000534112 USP40Q9NVE5 1235 aa26.61■■□□□ 1.85
SSH3-211ENST00000534112 GNL3LQ9NVN8 582 aaKnown RBP26.61■■□□□ 1.85
SSH3-211ENST00000534112 CEP126Q9P2H0 1117 aa26.61■■□□□ 1.85
SSH3-211ENST00000534112 FAM198AQ9UFP1 575 aa26.61■■□□□ 1.85
SSH3-211ENST00000534112 LDHBP07195 334 aaKnown RBP26.6■■□□□ 1.85
SSH3-211ENST00000534112 SLFN5Q08AF3 891 aa26.6■■□□□ 1.85
SSH3-211ENST00000534112 MOGSQ13724 837 aa26.6■■□□□ 1.85
SSH3-211ENST00000534112 ATP2B3Q16720 1220 aa26.6■■□□□ 1.85
SSH3-211ENST00000534112 NOL9Q5SY16 702 aaKnown RBP26.6■■□□□ 1.85
SSH3-211ENST00000534112 TRIM47Q96LD4 638 aa26.6■■□□□ 1.85
SSH3-211ENST00000534112 SRRDQ9UH36 339 aa26.6■■□□□ 1.85
SSH3-211ENST00000534112 FBXO3Q9UK99 471 aa26.6■■□□□ 1.85
SSH3-211ENST00000534112 CIAO1O76071 339 aa26.59■■□□□ 1.85
SSH3-211ENST00000534112 ALDH1L2Q3SY69 923 aa26.59■■□□□ 1.85
SSH3-211ENST00000534112 ADGRA2Q96PE1 1338 aa26.59■■□□□ 1.85
SSH3-211ENST00000534112 HOXD10P28358 340 aa26.58■■□□□ 1.85
SSH3-211ENST00000534112 FXR1P51114 621 aaKnown RBP eCLIP26.58■■□□□ 1.85
SSH3-211ENST00000534112 ZFPM1Q8IX07 1006 aa26.58■■□□□ 1.85
SSH3-211ENST00000534112 COLQQ9Y215 455 aaPredicted RBP26.58■■□□□ 1.85
SSH3-211ENST00000534112 FMNL1O95466 1100 aaPredicted RBP26.57■■□□□ 1.84
SSH3-211ENST00000534112 UBTFL1P0CB47 393 aaPredicted RBP26.57■■□□□ 1.84
SSH3-211ENST00000534112 OSBPP22059 807 aa26.57■■□□□ 1.84
SSH3-211ENST00000534112 MTFR1Q15390 333 aa26.57■■□□□ 1.84
SSH3-211ENST00000534112 SMC4Q9NTJ3 1288 aa26.57■■□□□ 1.84
SSH3-211ENST00000534112 DENND2AQ9ULE3 1009 aa26.57■■□□□ 1.84
SSH3-211ENST00000534112 SALL1Q9NSC2 1324 aa26.57■■□□□ 1.84
SSH3-211ENST00000534112 CEP290O15078 2479 aa26.57■■□□□ 1.84
SSH3-211ENST00000534112 CXCL11O14625 94 aa26.56■■□□□ 1.84
SSH3-211ENST00000534112 PHKA1P46020 1223 aa26.56■■□□□ 1.84
SSH3-211ENST00000534112 ZSWIM8A7E2V4 1837 aa26.55■■□□□ 1.84
SSH3-211ENST00000534112 H0YGN5 161 aa26.55■■□□□ 1.84
SSH3-211ENST00000534112 SEMA3EO15041 775 aa26.55■■□□□ 1.84
SSH3-211ENST00000534112 IL15P40933 162 aaPredicted RBP26.55■■□□□ 1.84
SSH3-211ENST00000534112 GPAT2Q6NUI2 795 aa26.55■■□□□ 1.84
SSH3-211ENST00000534112 RAET1EQ8TD07 263 aa26.55■■□□□ 1.84
SSH3-211ENST00000534112 PHF20L1A8MW92 1017 aa26.54■■□□□ 1.84
SSH3-211ENST00000534112 GRK4P32298 578 aa26.54■■□□□ 1.84
SSH3-211ENST00000534112 PARK7Q99497 189 aaKnown RBP26.54■■□□□ 1.84
SSH3-211ENST00000534112 SHISA4Q96DD7 197 aa26.53■■□□□ 1.84
SSH3-211ENST00000534112 CDCA7LQ96GN5 454 aa26.53■■□□□ 1.84
SSH3-211ENST00000534112 IDI2Q9BXS1 227 aa26.53■■□□□ 1.84
SSH3-211ENST00000534112 PA2G4Q9UQ80 394 aaKnown RBP26.53■■□□□ 1.84
SSH3-211ENST00000534112 ZBTB22O15209 634 aa26.52■■□□□ 1.84
SSH3-211ENST00000534112 CYP2C8P10632 490 aa26.52■■□□□ 1.84
SSH3-211ENST00000534112 BCRP11274 1271 aa26.52■■□□□ 1.84
SSH3-211ENST00000534112 RGS3P49796 1198 aa26.52■■□□□ 1.84
SSH3-211ENST00000534112 ATRNL1Q5VV63 1379 aa26.52■■□□□ 1.84
SSH3-211ENST00000534112 CCDC102BQ68D86 513 aa26.52■■□□□ 1.84
SSH3-211ENST00000534112 MYPNQ86TC9 1320 aa26.52■■□□□ 1.84
SSH3-211ENST00000534112 ZHX2Q9Y6X8 837 aa26.52■■□□□ 1.84
SSH3-211ENST00000534112 ENTPD3O75355 529 aa26.51■■□□□ 1.83
SSH3-211ENST00000534112 ADORA1P30542 326 aa26.51■■□□□ 1.83
SSH3-211ENST00000534112 SCYL3Q8IZE3 742 aa26.51■■□□□ 1.83
SSH3-211ENST00000534112 ZGPATQ8N5A5 531 aaKnown RBP26.51■■□□□ 1.83
SSH3-211ENST00000534112 NKX2-3Q8TAU0 364 aa26.51■■□□□ 1.83
SSH3-211ENST00000534112 PICK1Q9NRD5 415 aa26.51■■□□□ 1.83
SSH3-211ENST00000534112 NOB1Q9ULX3 412 aaKnown RBP26.51■■□□□ 1.83
SSH3-211ENST00000534112 LRRFIP2Q9Y608 721 aaKnown RBP26.51■■□□□ 1.83
SSH3-211ENST00000534112 GAKO14976 1311 aa26.5■■□□□ 1.83
SSH3-211ENST00000534112 PTPRAP18433 802 aa26.5■■□□□ 1.83
SSH3-211ENST00000534112 FCGRTP55899 365 aa26.5■■□□□ 1.83
SSH3-211ENST00000534112 SH3BP5LQ7L8J4 393 aa26.5■■□□□ 1.83
SSH3-211ENST00000534112 FASTKD5Q7L8L6 764 aaKnown RBP26.5■■□□□ 1.83
SSH3-211ENST00000534112 COPRSQ9NQ92 184 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms