RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 CREB3L3Q68CJ9 461 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 CCDC102BQ68D86 513 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 FRMPD1Q5SYB0 1578 aa12.84□□□□□ -0.35
AMBRA1-211ENST00000533727 KCNQ3O43525 872 aa12.83□□□□□ -0.35
AMBRA1-211ENST00000533727 CAVIN2O95810 425 aa12.83□□□□□ -0.35
AMBRA1-211ENST00000533727 SMCR8Q8TEV9 937 aaPredicted RBP12.83□□□□□ -0.35
AMBRA1-211ENST00000533727 SPC25Q9HBM1 224 aa12.83□□□□□ -0.35
AMBRA1-211ENST00000533727 CEP152O94986 1710 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 GPAA1O43292 621 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 FSIP1Q8NA03 581 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 CEP170BQ9Y4F5 1589 aaPredicted RBP12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 ARMT1Q9H993 441 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 SLC1A4P43007 532 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 TRPM1Q7Z4N2 1603 aa12.83□□□□□ -0.36
AMBRA1-211ENST00000533727 MMP10P09238 476 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 PCP11498 1178 aaKnown RBP12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 CHMLP26374 656 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 CHRNDQ07001 517 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 BEND3Q5T5X7 828 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 CACNA2D4Q7Z3S7 1137 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.82□□□□□ -0.361e-7■■■■■ 29
AMBRA1-211ENST00000533727 EXOC1Q9NV70 894 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 DCCP43146 1447 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 CCDC172P0C7W6 258 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 CCDC40Q4G0X9 1142 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 JAKMIP3Q5VZ66 844 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 PLEKHM2Q8IWE5 1019 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 NOD1Q9Y239 953 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 PLEKHG2Q9H7P9 1386 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 ABCA6Q8N139 1617 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 RIMS1Q86UR5 1692 aaKnown RBP12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 LIG1P18858 919 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 DHX37Q8IY37 1157 aaKnown RBP12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 FAM177A1Q8N128 213 aaPredicted RBP12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 SPON1Q9HCB6 807 aa12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
AMBRA1-211ENST00000533727 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 IQCEQ6IPM2 695 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 COPRSQ9NQ92 184 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 ABCC4O15439 1325 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 RLBP1P12271 317 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 NT5C2P49902 561 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 GRAPQ13588 217 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 BRAPQ7Z569 592 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 GRAPLQ8TC17 118 aaPredicted RBP12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 BACH1O14867 736 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 PDE8BO95263 885 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
AMBRA1-211ENST00000533727 KRT13P13646 458 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 CFAP100Q494V2 611 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 CCDC181Q5TID7 509 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 TAF4BQ92750 862 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 PLEKHF1Q96S99 279 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 CENPHQ9H3R5 247 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 STAT6P42226 847 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 ZNF532Q9HCE3 1301 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 TRERF1Q96PN7 1200 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 TAOK3Q9H2K8 898 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 KCNG1Q9UIX4 513 aa12.8□□□□□ -0.36
AMBRA1-211ENST00000533727 DEXIO95424 95 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 ZAP70P43403 619 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 CCNA1P78396 465 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 SPA17Q15506 151 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 TXNRD1Q16881 649 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 ATL3Q6DD88 541 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 CIAPIN1Q6FI81 312 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 NLRP10Q86W26 655 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 CARMIL3Q8ND23 1372 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 MTIF2P46199 727 aaKnown RBP12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 ZRSR2Q15696 482 aaKnown RBP12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 TBC1D32Q96NH3 1257 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 DSCC1Q9BVC3 393 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 ANGEL1Q9UNK9 670 aaKnown RBP12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 ANKRD62A6NC57 917 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 RAB11FIP4Q86YS3 637 aa12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
AMBRA1-211ENST00000533727 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 SWAP70Q9UH65 585 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms