RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 BEND3Q5T5X7 828 aa20.67■□□□□ 0.9
CHMP4A-203ENST00000527154 ZNF594Q96JF6 807 aaPredicted RBP20.67■□□□□ 0.9
CHMP4A-203ENST00000527154 FMNL1O95466 1100 aaPredicted RBP20.66■□□□□ 0.9
CHMP4A-203ENST00000527154 CACNB3P54284 484 aa20.66■□□□□ 0.9
CHMP4A-203ENST00000527154 CCDC57Q2TAC2 916 aa20.66■□□□□ 0.9
CHMP4A-203ENST00000527154 DCAF15Q66K64 600 aa20.66■□□□□ 0.9
CHMP4A-203ENST00000527154 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.66■□□□□ 0.9
CHMP4A-203ENST00000527154 GDF15Q99988 308 aa20.66■□□□□ 0.9
CHMP4A-203ENST00000527154 UNC93B1Q9H1C4 597 aa20.66■□□□□ 0.9
CHMP4A-203ENST00000527154 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 INPP5BP32019 993 aa20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 NOL9Q5SY16 702 aaKnown RBP20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 PXYLP1Q8TE99 480 aa20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 TBC1D22AQ8WUA7 517 aa20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 TEKT1Q969V4 418 aa20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 CRISPLD2Q9H0B8 497 aa20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 PAK6Q9NQU5 681 aaPredicted RBP20.65■□□□□ 0.9
CHMP4A-203ENST00000527154 IRF5Q13568 498 aa20.64■□□□□ 0.89
CHMP4A-203ENST00000527154 GPAT2Q6NUI2 795 aa20.64■□□□□ 0.89
CHMP4A-203ENST00000527154 ZNF341Q9BYN7 854 aa20.64■□□□□ 0.89
CHMP4A-203ENST00000527154 CNNM1Q9NRU3 951 aa20.64■□□□□ 0.89
CHMP4A-203ENST00000527154 GABRQQ9UN88 632 aa20.64■□□□□ 0.89
CHMP4A-203ENST00000527154 SUGT1Q9Y2Z0 365 aa20.64■□□□□ 0.89
CHMP4A-203ENST00000527154 PLIN1O60240 522 aa20.63■□□□□ 0.89
CHMP4A-203ENST00000527154 EVI5O60447 810 aa20.63■□□□□ 0.89
CHMP4A-203ENST00000527154 FCGRTP55899 365 aa20.63■□□□□ 0.89
CHMP4A-203ENST00000527154 IL16Q14005 1332 aa20.62■□□□□ 0.89
CHMP4A-203ENST00000527154 HHIPL2Q6UWX4 724 aa20.62■□□□□ 0.89
CHMP4A-203ENST00000527154 PARK7Q99497 189 aaKnown RBP20.62■□□□□ 0.89
CHMP4A-203ENST00000527154 STAP2Q9UGK3 403 aa20.62■□□□□ 0.89
CHMP4A-203ENST00000527154 CHMP3Q9Y3E7 222 aa20.62■□□□□ 0.89
CHMP4A-203ENST00000527154 ALPK3Q96L96 1907 aa20.61■□□□□ 0.89
CHMP4A-203ENST00000527154 MGAMO43451 1857 aa20.61■□□□□ 0.89
CHMP4A-203ENST00000527154 GRM8O00222 908 aa20.61■□□□□ 0.89
CHMP4A-203ENST00000527154 CXCL11O14625 94 aa20.61■□□□□ 0.89
CHMP4A-203ENST00000527154 LRIT3Q3SXY7 679 aa20.61■□□□□ 0.89
CHMP4A-203ENST00000527154 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
CHMP4A-203ENST00000527154 FAM151AQ8WW52 585 aa20.61■□□□□ 0.89
CHMP4A-203ENST00000527154 PUS3Q9BZE2 481 aaKnown RBP20.61■□□□□ 0.89
CHMP4A-203ENST00000527154 VGLL2Q8N8G2 317 aa20.6■□□□□ 0.89
CHMP4A-203ENST00000527154 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
CHMP4A-203ENST00000527154 PRKRIP1Q9H875 184 aaPredicted RBP20.6■□□□□ 0.89
CHMP4A-203ENST00000527154 TMOD2Q9NZR1 351 aa20.6■□□□□ 0.89
CHMP4A-203ENST00000527154 STXBP5LQ9Y2K9 1186 aa20.6■□□□□ 0.89
CHMP4A-203ENST00000527154 ATRNL1Q5VV63 1379 aa20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 ADCY3O60266 1144 aa20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 VAMP4O75379 141 aa20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 ECM2O94769 699 aaPredicted RBP20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 FLT3LGP49771 235 aa20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 TAF7LQ5H9L4 462 aa20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 MIGA2Q7L4E1 593 aa20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 WWC1Q8IX03 1113 aa20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 BIN2Q9UBW5 565 aaPredicted RBP20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 SLC45A1Q9Y2W3 748 aa20.59■□□□□ 0.89
CHMP4A-203ENST00000527154 MAST3O60307 1309 aa20.58■□□□□ 0.89
CHMP4A-203ENST00000527154 MROH5Q6ZUA9 1318 aa20.58■□□□□ 0.89
CHMP4A-203ENST00000527154 KIF16BQ96L93 1317 aa20.58■□□□□ 0.89
CHMP4A-203ENST00000527154 INHAP05111 366 aa20.58■□□□□ 0.89
CHMP4A-203ENST00000527154 CYP2C8P10632 490 aa20.58■□□□□ 0.89
CHMP4A-203ENST00000527154 A0A0G2JLL6 359 aaPredicted RBP20.57■□□□□ 0.88
CHMP4A-203ENST00000527154 F6X3S4 739 aa20.57■□□□□ 0.88
CHMP4A-203ENST00000527154 PRRT2Q7Z6L0 340 aaPredicted RBP20.57■□□□□ 0.88
CHMP4A-203ENST00000527154 MTMR10Q9NXD2 777 aa20.57■□□□□ 0.88
CHMP4A-203ENST00000527154 VCANP13611 3396 aa20.57■□□□□ 0.88
CHMP4A-203ENST00000527154 DDX10Q13206 875 aaKnown RBP20.56■□□□□ 0.88
CHMP4A-203ENST00000527154 ANKLE1Q8NAG6 615 aa20.56■□□□□ 0.88
CHMP4A-203ENST00000527154 PAWRQ96IZ0 340 aaKnown RBP20.56■□□□□ 0.88
CHMP4A-203ENST00000527154 DEFB118Q96PH6 123 aa20.56■□□□□ 0.88
CHMP4A-203ENST00000527154 IQSEC3Q9UPP2 1182 aaPredicted RBP20.56■□□□□ 0.88
CHMP4A-203ENST00000527154 UTYO14607 1347 aa20.55■□□□□ 0.88
CHMP4A-203ENST00000527154 ELNP15502 786 aa20.55■□□□□ 0.88
CHMP4A-203ENST00000527154 CHAF1AQ13111 956 aaPredicted RBP20.55■□□□□ 0.88
CHMP4A-203ENST00000527154 RABL6Q3YEC7 729 aaPredicted RBP20.55■□□□□ 0.88
CHMP4A-203ENST00000527154 DEFB123Q8N688 67 aa20.55■□□□□ 0.88
CHMP4A-203ENST00000527154 PHF20L1A8MW92 1017 aa20.54■□□□□ 0.88
CHMP4A-203ENST00000527154 ALDH1L1O75891 902 aa20.54■□□□□ 0.88
CHMP4A-203ENST00000527154 PDE8BO95263 885 aa20.54■□□□□ 0.88
CHMP4A-203ENST00000527154 TFRCP02786 760 aaKnown RBP20.54■□□□□ 0.88
CHMP4A-203ENST00000527154 MAP3K10Q02779 954 aa20.54■□□□□ 0.88
CHMP4A-203ENST00000527154 NECAB2Q7Z6G3 386 aa20.54■□□□□ 0.88
CHMP4A-203ENST00000527154 SPTBN5Q9NRC6 3674 aaKnown RBP20.54■□□□□ 0.88
CHMP4A-203ENST00000527154 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 FGFR2P21802 821 aa20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 NFIAQ12857 509 aa20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 CAVIN4Q5BKX8 364 aa20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 FASTKD5Q7L8L6 764 aaKnown RBP20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 VPS37DQ86XT2 251 aa20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 DIS3LQ8TF46 1054 aaKnown RBP20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 SUCLG2Q96I99 432 aa20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 FAM198AQ9UFP1 575 aa20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 AFG3L2Q9Y4W6 797 aa20.53■□□□□ 0.88
CHMP4A-203ENST00000527154 CDC42EP5Q6NZY7 148 aa20.52■□□□□ 0.88
CHMP4A-203ENST00000527154 Q7L0L9 218 aa20.52■□□□□ 0.88
CHMP4A-203ENST00000527154 COL25A1Q9BXS0 654 aaPredicted RBP20.52■□□□□ 0.88
CHMP4A-203ENST00000527154 DAGLAQ9Y4D2 1042 aa20.52■□□□□ 0.88
CHMP4A-203ENST00000527154 BCAMP50895 628 aa20.51■□□□□ 0.87
CHMP4A-203ENST00000527154 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
CHMP4A-203ENST00000527154 PTPRFP10586 1907 aa20.51■□□□□ 0.87
CHMP4A-203ENST00000527154 RFX7Q2KHR2 1363 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms