RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 HP1BP3Q5SSJ5 553 aaPredicted RBP7.38□□□□□ -1.23
CD44-215ENST00000525241 NUTM2GQ5VZR2 741 aa7.38□□□□□ -1.23
CD44-215ENST00000525241 AGMOQ6ZNB7 445 aa7.38□□□□□ -1.23
CD44-215ENST00000525241 DZIP1LQ8IYY4 767 aaKnown RBP7.38□□□□□ -1.23
CD44-215ENST00000525241 SMG8Q8ND04 991 aaKnown RBP7.38□□□□□ -1.23
CD44-215ENST00000525241 UBL7Q96S82 380 aaPredicted RBP7.38□□□□□ -1.23
CD44-215ENST00000525241 RSRP1Q9BUV0 290 aa7.38□□□□□ -1.23
CD44-215ENST00000525241 AOC2O75106 756 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 TIAF1O95411 115 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 PROCP04070 461 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 RLBP1P12271 317 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 GLB1P16278 677 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 FANCCQ00597 558 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 MAP1SQ66K74 1059 aaPredicted RBP7.37□□□□□ -1.23
CD44-215ENST00000525241 ANKRD34AQ69YU3 496 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 LLGL2Q6P1M3 1020 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 ERMP1Q7Z2K6 904 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 PHC3Q8NDX5 983 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 WDR18Q9BV38 432 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 CYP4F12Q9HCS2 524 aa7.37□□□□□ -1.23
CD44-215ENST00000525241 SYNGAP1Q96PV0 1343 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 SCAMP3O14828 347 aaKnown RBP7.36□□□□□ -1.23
CD44-215ENST00000525241 TRIM37O94972 964 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 DRD2P14416 443 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 TFE3P19532 575 aaPredicted RBP7.36□□□□□ -1.23
CD44-215ENST00000525241 KIF4BQ2VIQ3 1234 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 SCARA3Q6AZY7 606 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 GPBAR1Q8TDU6 330 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 FAM46AQ96IP4 442 aaKnown RBP7.36□□□□□ -1.23
CD44-215ENST00000525241 SPOCK3Q9BQ16 436 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 CEP41Q9BYV8 373 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 METTL5Q9NRN9 209 aaKnown RBP7.36□□□□□ -1.23
CD44-215ENST00000525241 TLR6Q9Y2C9 796 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 PCDHGC5Q9Y5F6 944 aa7.36□□□□□ -1.23
CD44-215ENST00000525241 F6X3S4 739 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 ZNF76P36508 570 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 PREPP48147 710 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 PTPN11Q06124 597 aaPredicted RBP7.35□□□□□ -1.23
CD44-215ENST00000525241 SOX4Q06945 474 aaPredicted RBP7.35□□□□□ -1.23
CD44-215ENST00000525241 GPAT2Q6NUI2 795 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 FDX2Q6P4F2 183 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 C12orf50Q8NA57 414 aaPredicted RBP7.35□□□□□ -1.23
CD44-215ENST00000525241 GAL3ST3Q96A11 431 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 TMEM74Q96NL1 305 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 RAD18Q9NS91 495 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 GGT7Q9UJ14 662 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 PCDHB5Q9Y5E4 795 aa7.35□□□□□ -1.23
CD44-215ENST00000525241 MSTNO14793 375 aa7.34□□□□□ -1.23
CD44-215ENST00000525241 ADH5P11766 374 aa7.34□□□□□ -1.23
CD44-215ENST00000525241 AKAP4Q5JQC9 854 aa7.34□□□□□ -1.23
CD44-215ENST00000525241 HS2ST1Q7LGA3 356 aa7.34□□□□□ -1.23
CD44-215ENST00000525241 RELL1Q8IUW5 271 aa7.34□□□□□ -1.23
CD44-215ENST00000525241 TPSG1Q9NRR2 321 aa7.34□□□□□ -1.23
CD44-215ENST00000525241 KBTBD4Q9NVX7 518 aa7.34□□□□□ -1.23
CD44-215ENST00000525241 PPP1R9AQ9ULJ8 1098 aa7.34□□□□□ -1.23
CD44-215ENST00000525241 SLFN14P0C7P3 912 aa7.33□□□□□ -1.24
CD44-215ENST00000525241 GBP2P32456 591 aaPredicted RBP7.33□□□□□ -1.24
CD44-215ENST00000525241 PWP1Q13610 501 aa7.33□□□□□ -1.24
CD44-215ENST00000525241 METTL16Q86W50 562 aaKnown RBP7.33□□□□□ -1.24
CD44-215ENST00000525241 ARMC10Q8N2F6 343 aa7.33□□□□□ -1.24
CD44-215ENST00000525241 C2CD4AQ8NCU7 369 aaPredicted RBP7.33□□□□□ -1.24
CD44-215ENST00000525241 RNF34Q969K3 372 aa7.33□□□□□ -1.24
CD44-215ENST00000525241 RHOVQ96L33 236 aa7.33□□□□□ -1.24
CD44-215ENST00000525241 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 SART1O43290 800 aaKnown RBP7.32□□□□□ -1.24
CD44-215ENST00000525241 IGHA1P01876 353 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 HDLBPQ00341 1268 aaKnown RBP7.32□□□□□ -1.24
CD44-215ENST00000525241 LMNB2Q03252 620 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 CAMK2GQ13555 558 aaPredicted RBP7.32□□□□□ -1.24
CD44-215ENST00000525241 SEPT6Q14141 434 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 DOC2BQ14184 412 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 UVSSAQ2YD98 709 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 ZC3H12AQ5D1E8 599 aaKnown RBP7.32□□□□□ -1.24
CD44-215ENST00000525241 TRIM42Q8IWZ5 723 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 TP53INP1Q96A56 240 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 ACSBG1Q96GR2 724 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 GSX1Q9H4S2 264 aaPredicted RBP7.32□□□□□ -1.24
CD44-215ENST00000525241 CRIM1Q9NZV1 1036 aa7.32□□□□□ -1.24
CD44-215ENST00000525241 MINDY4BA8MYZ0 360 aa7.31□□□□□ -1.24
CD44-215ENST00000525241 E9PSI1 815 aa7.31□□□□□ -1.24
CD44-215ENST00000525241 PF4P02776 101 aa7.31□□□□□ -1.24
CD44-215ENST00000525241 HNRNPUQ00839 825 aaKnown RBP eCLIP7.31□□□□□ -1.24
CD44-215ENST00000525241 ID3Q02535 119 aa7.31□□□□□ -1.24
CD44-215ENST00000525241 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.31□□□□□ -1.24
CD44-215ENST00000525241 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.31□□□□□ -1.24
CD44-215ENST00000525241 MYRFLQ96LU7 910 aa7.31□□□□□ -1.24
CD44-215ENST00000525241 MIR1-1HGQ9H1L0 117 aa7.31□□□□□ -1.24
CD44-215ENST00000525241 PCDHA4Q9UN74 947 aa7.31□□□□□ -1.24
CD44-215ENST00000525241 AP4E1Q9UPM8 1137 aa7.31□□□□□ -1.24
CD44-215ENST00000525241 LMNB1P20700 586 aa7.3□□□□□ -1.24
CD44-215ENST00000525241 GARTP22102 1010 aa7.3□□□□□ -1.24
CD44-215ENST00000525241 C9orf131Q5VYM1 1079 aa7.3□□□□□ -1.24
CD44-215ENST00000525241 DYMQ7RTS9 669 aa7.3□□□□□ -1.24
CD44-215ENST00000525241 CCDC84Q86UT8 332 aaPredicted RBP7.3□□□□□ -1.24
CD44-215ENST00000525241 UTP4Q969X6 686 aaKnown RBP7.3□□□□□ -1.24
CD44-215ENST00000525241 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
CD44-215ENST00000525241 KCNQ5Q9NR82 932 aa7.3□□□□□ -1.24
CD44-215ENST00000525241 DISC1Q9NRI5 854 aa7.3□□□□□ -1.24
CD44-215ENST00000525241 ACTL7BQ9Y614 415 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms