RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CDC42EP5Q6NZY7 148 aa22.88■■□□□ 1.25
CAPN1-203ENST00000525013 MCOLN1Q9GZU1 580 aa22.88■■□□□ 1.25
CAPN1-203ENST00000525013 PDS5AQ29RF7 1337 aaKnown RBP22.87■■□□□ 1.25
CAPN1-203ENST00000525013 ZBTB22O15209 634 aa22.87■■□□□ 1.25
CAPN1-203ENST00000525013 MS4A1P11836 297 aa22.87■■□□□ 1.25
CAPN1-203ENST00000525013 TCP10Q12799 353 aa22.87■■□□□ 1.25
CAPN1-203ENST00000525013 HOOK2Q96ED9 719 aa22.87■■□□□ 1.25
CAPN1-203ENST00000525013 USP40Q9NVE5 1235 aa22.87■■□□□ 1.25
CAPN1-203ENST00000525013 INHBEP58166 350 aa22.86■■□□□ 1.25
CAPN1-203ENST00000525013 MAP3K9P80192 1104 aa22.86■■□□□ 1.25
CAPN1-203ENST00000525013 CSADQ9Y600 493 aa22.86■■□□□ 1.25
CAPN1-203ENST00000525013 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.85■■□□□ 1.25
CAPN1-203ENST00000525013 SLF2Q8IX21 1173 aa22.85■■□□□ 1.25
CAPN1-203ENST00000525013 OPTNQ96CV9 577 aa22.85■■□□□ 1.25
CAPN1-203ENST00000525013 HMG20BQ9P0W2 317 aa22.85■■□□□ 1.25
CAPN1-203ENST00000525013 GJA5P36382 358 aa22.84■■□□□ 1.25
CAPN1-203ENST00000525013 NFIAQ12857 509 aa22.84■■□□□ 1.25
CAPN1-203ENST00000525013 VGLL4Q14135 290 aa22.84■■□□□ 1.25
CAPN1-203ENST00000525013 DCAF15Q66K64 600 aa22.84■■□□□ 1.25
CAPN1-203ENST00000525013 PI16Q6UXB8 463 aa22.84■■□□□ 1.25
CAPN1-203ENST00000525013 ERICH6Q7L0X2 663 aa22.84■■□□□ 1.25
CAPN1-203ENST00000525013 SPATA5Q8NB90 893 aa22.84■■□□□ 1.25
CAPN1-203ENST00000525013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.84■■□□□ 1.25
CAPN1-203ENST00000525013 FAM151AQ8WW52 585 aa22.84■■□□□ 1.25
CAPN1-203ENST00000525013 CCDC85CA6NKD9 419 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 ALDH1A1P00352 501 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 TNNI3KQ59H18 835 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 MIGA2Q7L4E1 593 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 IFNL1Q8IU54 200 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 WRNIP1Q96S55 665 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 GPR108Q9NPR9 543 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 RCAN3Q9UKA8 241 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 FPGT-TNNI3KV9GXZ4 949 aa22.83■■□□□ 1.25
CAPN1-203ENST00000525013 RPAP1Q9BWH6 1393 aaPredicted RBP22.82■■□□□ 1.24
CAPN1-203ENST00000525013 UQCRFS1P1P0C7P4 283 aa22.82■■□□□ 1.24
CAPN1-203ENST00000525013 ARID4AP29374 1257 aaPredicted RBP22.82■■□□□ 1.24
CAPN1-203ENST00000525013 CEP85Q6P2H3 762 aa22.82■■□□□ 1.24
CAPN1-203ENST00000525013 TBC1D9Q6ZT07 1266 aa22.82■■□□□ 1.24
CAPN1-203ENST00000525013 CNKSR2Q8WXI2 1034 aa22.82■■□□□ 1.24
CAPN1-203ENST00000525013 NOP58Q9Y2X3 529 aaKnown RBP22.82■■□□□ 1.24
CAPN1-203ENST00000525013 GAKO14976 1311 aa22.82■■□□□ 1.24
CAPN1-203ENST00000525013 GPR25O00155 361 aa22.81■■□□□ 1.24
CAPN1-203ENST00000525013 MECOMQ03112 1051 aa22.81■■□□□ 1.24
CAPN1-203ENST00000525013 CCDC158Q5M9N0 1113 aa22.81■■□□□ 1.24
CAPN1-203ENST00000525013 TTC39AQ5SRH9 613 aa22.81■■□□□ 1.24
CAPN1-203ENST00000525013 ZNF296Q8WUU4 475 aaPredicted RBP22.81■■□□□ 1.24
CAPN1-203ENST00000525013 DBNDD2Q9BQY9 259 aa22.81■■□□□ 1.24
CAPN1-203ENST00000525013 FAM198AQ9UFP1 575 aa22.81■■□□□ 1.24
CAPN1-203ENST00000525013 LAMB1P07942 1786 aa22.81■■□□□ 1.24
CAPN1-203ENST00000525013 IGF2BP3O00425 579 aaKnown RBP eCLIP22.8■■□□□ 1.24
CAPN1-203ENST00000525013 MCAMP43121 646 aa22.8■■□□□ 1.24
CAPN1-203ENST00000525013 OTUD7BQ6GQQ9 843 aa22.8■■□□□ 1.24
CAPN1-203ENST00000525013 CTU1Q7Z7A3 348 aaKnown RBP22.8■■□□□ 1.24
CAPN1-203ENST00000525013 ZKSCAN4Q969J2 545 aaPredicted RBP22.8■■□□□ 1.24
CAPN1-203ENST00000525013 OTUD5Q96G74 571 aa22.8■■□□□ 1.24
CAPN1-203ENST00000525013 ZNF341Q9BYN7 854 aa22.8■■□□□ 1.24
CAPN1-203ENST00000525013 R3HDMLQ9H3Y0 253 aa22.8■■□□□ 1.24
CAPN1-203ENST00000525013 SNRKQ9NRH2 765 aa22.8■■□□□ 1.24
CAPN1-203ENST00000525013 RAI14Q9P0K7 980 aa22.8■■□□□ 1.24
CAPN1-203ENST00000525013 BTDP43251 543 aa22.79■■□□□ 1.24
CAPN1-203ENST00000525013 RGS3P49796 1198 aa22.79■■□□□ 1.24
CAPN1-203ENST00000525013 ZFPM1Q8IX07 1006 aa22.79■■□□□ 1.24
CAPN1-203ENST00000525013 FAM163AQ96GL9 167 aaPredicted RBP22.79■■□□□ 1.24
CAPN1-203ENST00000525013 LRP2BPQ9P2M1 347 aa22.79■■□□□ 1.24
CAPN1-203ENST00000525013 COG6Q9Y2V7 657 aa22.79■■□□□ 1.24
CAPN1-203ENST00000525013 MROH7-TTC4A0A0A0MT08 1334 aa22.79■■□□□ 1.24
CAPN1-203ENST00000525013 LDHCP07864 332 aa22.78■■□□□ 1.24
CAPN1-203ENST00000525013 GSTO1P78417 241 aa22.78■■□□□ 1.24
CAPN1-203ENST00000525013 CFHR5Q9BXR6 569 aa22.78■■□□□ 1.24
CAPN1-203ENST00000525013 SNCAIPQ9Y6H5 919 aa22.78■■□□□ 1.24
CAPN1-203ENST00000525013 FKTNO75072 461 aa22.77■■□□□ 1.24
CAPN1-203ENST00000525013 GTF2A2P52657 109 aa22.77■■□□□ 1.24
CAPN1-203ENST00000525013 NOM1Q5C9Z4 860 aaKnown RBP22.77■■□□□ 1.24
CAPN1-203ENST00000525013 ERO1BQ86YB8 467 aa22.77■■□□□ 1.24
CAPN1-203ENST00000525013 ZSCAN29Q8IWY8 852 aaPredicted RBP22.77■■□□□ 1.24
CAPN1-203ENST00000525013 IDI2Q9BXS1 227 aa22.77■■□□□ 1.24
CAPN1-203ENST00000525013 DDX19BQ9UMR2 479 aa22.77■■□□□ 1.24
CAPN1-203ENST00000525013 EXOC6BQ9Y2D4 811 aa22.77■■□□□ 1.24
CAPN1-203ENST00000525013 CCL15-CCL14A0A0B4J2E2 113 aa22.76■■□□□ 1.23
CAPN1-203ENST00000525013 TESPA1A2RU30 521 aaPredicted RBP22.76■■□□□ 1.23
CAPN1-203ENST00000525013 SPDYE5A6NIY4 337 aa22.76■■□□□ 1.23
CAPN1-203ENST00000525013 ENTPD3O75355 529 aa22.76■■□□□ 1.23
CAPN1-203ENST00000525013 PICALMQ13492 652 aa22.76■■□□□ 1.23
CAPN1-203ENST00000525013 CCL15Q16663 113 aa22.76■■□□□ 1.23
CAPN1-203ENST00000525013 ZNF384Q8TF68 577 aa22.76■■□□□ 1.23
CAPN1-203ENST00000525013 NSUN4Q96CB9 384 aaKnown RBP22.76■■□□□ 1.23
CAPN1-203ENST00000525013 MS4A4AQ96JQ5 239 aa22.76■■□□□ 1.23
CAPN1-203ENST00000525013 PTPN18Q99952 460 aa22.76■■□□□ 1.23
CAPN1-203ENST00000525013 CCDC8Q9H0W5 538 aaPredicted RBP22.76■■□□□ 1.23
CAPN1-203ENST00000525013 DOCK2Q92608 1830 aa22.75■■□□□ 1.23
CAPN1-203ENST00000525013 GPR75-ASB3A0A0A6YYF3 556 aa22.75■■□□□ 1.23
CAPN1-203ENST00000525013 INPP5BP32019 993 aa22.75■■□□□ 1.23
CAPN1-203ENST00000525013 DBNLQ9UJU6 430 aaKnown RBP22.75■■□□□ 1.23
CAPN1-203ENST00000525013 MYO5AQ9Y4I1 1855 aaKnown RBP22.75■■□□□ 1.23
CAPN1-203ENST00000525013 WDHD1O75717 1129 aaPredicted RBP22.74■■□□□ 1.23
CAPN1-203ENST00000525013 ERC1Q8IUD2 1116 aa22.74■■□□□ 1.23
CAPN1-203ENST00000525013 BRI3BPQ8WY22 251 aa22.74■■□□□ 1.23
CAPN1-203ENST00000525013 EAF2Q96CJ1 260 aaPredicted RBP22.74■■□□□ 1.23
CAPN1-203ENST00000525013 TLR7Q9NYK1 1049 aaKnown RBP22.74■■□□□ 1.23
CAPN1-203ENST00000525013 CRHR2Q13324 411 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms