RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 ABCB6Q9NP58 842 aa6.41□□□□□ -1.38
PCM1-220ENST00000523896 VTI1BQ9UEU0 232 aa6.41□□□□□ -1.38
PCM1-220ENST00000523896 MAP4P27816 1152 aaKnown RBP6.4□□□□□ -1.38
PCM1-220ENST00000523896 INTS5Q6P9B9 1019 aaKnown RBP6.4□□□□□ -1.38
PCM1-220ENST00000523896 KRTAP1-3Q8IUG1 177 aa6.4□□□□□ -1.38
PCM1-220ENST00000523896 SMG8Q8ND04 991 aaKnown RBP6.4□□□□□ -1.38
PCM1-220ENST00000523896 CORO1BQ9BR76 489 aa6.4□□□□□ -1.38
PCM1-220ENST00000523896 TMPRSS13Q9BYE2 586 aa6.4□□□□□ -1.38
PCM1-220ENST00000523896 RAD18Q9NS91 495 aa6.4□□□□□ -1.38
PCM1-220ENST00000523896 PPP4R2Q9NY27 417 aa6.4□□□□□ -1.38
PCM1-220ENST00000523896 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 CTSHP09668 335 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 USP17L7P0C7H9 530 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 XRCC5P13010 732 aaKnown RBP6.39□□□□□ -1.39
PCM1-220ENST00000523896 ITPKAP23677 461 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 GSTT1P30711 240 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 PTPN12Q05209 780 aaKnown RBP6.39□□□□□ -1.39
PCM1-220ENST00000523896 POU4F3Q15319 338 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 SPRED3Q2MJR0 410 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 PAOXQ6QHF9 649 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 C3orf58Q8NDZ4 430 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 SUGCTQ9HAC7 445 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 ATG3Q9NT62 314 aa6.39□□□□□ -1.39
PCM1-220ENST00000523896 TGFB1P01137 390 aa6.38□□□□□ -1.39
PCM1-220ENST00000523896 MAOBP27338 520 aa6.38□□□□□ -1.39
PCM1-220ENST00000523896 GRIA4P48058 902 aa6.38□□□□□ -1.39
PCM1-220ENST00000523896 TSNAXIP1Q2TAA8 658 aa6.38□□□□□ -1.39
PCM1-220ENST00000523896 LDLRAD1Q5T700 205 aa6.38□□□□□ -1.39
PCM1-220ENST00000523896 ANKRD24Q8TF21 1146 aa6.38□□□□□ -1.39
PCM1-220ENST00000523896 BACH2Q9BYV9 841 aa6.38□□□□□ -1.39
PCM1-220ENST00000523896 FAM95CA0A1B0GW59 222 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 FCGRTP55899 365 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 PDE3AQ14432 1141 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 NFKBIBQ15653 356 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 SGO2Q562F6 1265 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 ZDHHC13Q8IUH4 622 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 SHKBP1Q8TBC3 707 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 IGSF5Q9NSI5 407 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 PPM1HQ9ULR3 514 aa6.37□□□□□ -1.39
PCM1-220ENST00000523896 WDR64B1ANS9 1081 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 TIAF1O95411 115 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 CD97P48960 835 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 ST13P50502 369 aaKnown RBP6.36□□□□□ -1.39
PCM1-220ENST00000523896 SOX4Q06945 474 aaPredicted RBP6.36□□□□□ -1.39
PCM1-220ENST00000523896 AP3B2Q13367 1082 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 ZNF423Q2M1K9 1284 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 AKAP4Q5JQC9 854 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 DTHD1Q6ZMT9 781 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 FBXL6Q8N531 539 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 MFSD14AQ96MC6 490 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 OSBPL1AQ9BXW6 950 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 ZNF576Q9H609 170 aa6.36□□□□□ -1.39
PCM1-220ENST00000523896 USP31Q70CQ4 1352 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 SCAMP3O14828 347 aaKnown RBP6.35□□□□□ -1.39
PCM1-220ENST00000523896 B3GALT4O96024 378 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 ADH5P11766 374 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 DRD2P14416 443 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 MAP7Q14244 749 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 CPSF6Q16630 551 aaKnown RBP eCLIP6.35□□□□□ -1.39
PCM1-220ENST00000523896 RPS26P11Q5JNZ5 115 aaPredicted RBP6.35□□□□□ -1.39
PCM1-220ENST00000523896 MEI1Q5TIA1 1274 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 DYMQ7RTS9 669 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 TMEM87AQ8NBN3 555 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 FBLIM1Q8WUP2 373 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 METTL22Q9BUU2 404 aaPredicted RBP6.35□□□□□ -1.39
PCM1-220ENST00000523896 METTL5Q9NRN9 209 aaKnown RBP6.35□□□□□ -1.39
PCM1-220ENST00000523896 AP4E1Q9UPM8 1137 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 LEMD3Q9Y2U8 911 aa6.35□□□□□ -1.39
PCM1-220ENST00000523896 TCF3P15923 654 aa6.34□□□□□ -1.39
PCM1-220ENST00000523896 RAB6AP20340 208 aa6.34□□□□□ -1.39
PCM1-220ENST00000523896 TAF1CQ15572 869 aaPredicted RBP6.34□□□□□ -1.39
PCM1-220ENST00000523896 PIM2Q9P1W9 311 aa6.34□□□□□ -1.39
PCM1-220ENST00000523896 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
PCM1-220ENST00000523896 KIAA1324LA8MWY0 1029 aaPredicted RBP6.33□□□□□ -1.4
PCM1-220ENST00000523896 DLGAP3O95886 979 aa6.33□□□□□ -1.4
PCM1-220ENST00000523896 FANCCQ00597 558 aa6.33□□□□□ -1.4
PCM1-220ENST00000523896 PPP2R3AQ06190 1150 aa6.33□□□□□ -1.4
PCM1-220ENST00000523896 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
PCM1-220ENST00000523896 GPN3Q9UHW5 284 aaPredicted RBP6.33□□□□□ -1.4
PCM1-220ENST00000523896 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
PCM1-220ENST00000523896 RANGAP1P46060 587 aaPredicted RBP6.32□□□□□ -1.4
PCM1-220ENST00000523896 CDPF1Q6NVV7 123 aa6.32□□□□□ -1.4
PCM1-220ENST00000523896 TBC1D32Q96NH3 1257 aa6.32□□□□□ -1.4
PCM1-220ENST00000523896 CEP44Q9C0F1 390 aa6.32□□□□□ -1.4
PCM1-220ENST00000523896 NRSN2Q9GZP1 204 aa6.32□□□□□ -1.4
PCM1-220ENST00000523896 ANGEL1Q9UNK9 670 aaKnown RBP6.32□□□□□ -1.4
PCM1-220ENST00000523896 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.31□□□□□ -1.4
PCM1-220ENST00000523896 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 ZNF76P36508 570 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 ASPAP45381 313 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 IRAK1P51617 712 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 FAAP100Q0VG06 881 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 SV2BQ7L1I2 683 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
PCM1-220ENST00000523896 NOC4LQ9BVI4 516 aaKnown RBP6.31□□□□□ -1.4
PCM1-220ENST00000523896 PIDD1Q9HB75 910 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 ACTL7BQ9Y614 415 aa6.31□□□□□ -1.4
PCM1-220ENST00000523896 WNT11O96014 354 aa6.3□□□□□ -1.4
PCM1-220ENST00000523896 ZNF157P51786 506 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms