RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 MYH13Q9UKX3 1938 aa22.23■■□□□ 1.15
VEGFA-222ENST00000520948 SPDYE2BA6NHP3 402 aa22.22■■□□□ 1.15
VEGFA-222ENST00000520948 MYO1BO43795 1136 aa22.22■■□□□ 1.15
VEGFA-222ENST00000520948 SPDYE6P0CI01 402 aa22.22■■□□□ 1.15
VEGFA-222ENST00000520948 RBM5P52756 815 aaKnown RBP eCLIP22.22■■□□□ 1.151e-9■□□□□ 9.1
VEGFA-222ENST00000520948 GORABQ5T7V8 394 aa22.22■■□□□ 1.15
VEGFA-222ENST00000520948 SLC10A4Q96EP9 437 aa22.22■■□□□ 1.15
VEGFA-222ENST00000520948 DENND2AQ9ULE3 1009 aa22.22■■□□□ 1.15
VEGFA-222ENST00000520948 PDS5AQ29RF7 1337 aaKnown RBP22.22■■□□□ 1.15
VEGFA-222ENST00000520948 LAMB1P07942 1786 aa22.22■■□□□ 1.15
VEGFA-222ENST00000520948 FKTNO75072 461 aa22.21■■□□□ 1.15
VEGFA-222ENST00000520948 RASGRF1Q13972 1273 aa22.21■■□□□ 1.15
VEGFA-222ENST00000520948 CCDC158Q5M9N0 1113 aa22.21■■□□□ 1.15
VEGFA-222ENST00000520948 PDE4DIPQ5VU43 2346 aa22.2■■□□□ 1.15
VEGFA-222ENST00000520948 OTOFQ9HC10 1997 aa22.2■■□□□ 1.14
VEGFA-222ENST00000520948 PPP1R12BO60237 982 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-222ENST00000520948 FRAT2O75474 233 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-222ENST00000520948 UQCRFS1P1P0C7P4 283 aa22.2■■□□□ 1.14
VEGFA-222ENST00000520948 NOM1Q5C9Z4 860 aaKnown RBP22.2■■□□□ 1.14
VEGFA-222ENST00000520948 NBPF12Q5TAG4 269 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-222ENST00000520948 WNK4Q96J92 1243 aa22.2■■□□□ 1.14
VEGFA-222ENST00000520948 PPP2R3BQ9Y5P8 575 aa22.2■■□□□ 1.14
VEGFA-222ENST00000520948 IFIT2P09913 472 aaKnown RBP22.19■■□□□ 1.14
VEGFA-222ENST00000520948 MCAMP43121 646 aa22.19■■□□□ 1.14
VEGFA-222ENST00000520948 CHAF1AQ13111 956 aaPredicted RBP22.19■■□□□ 1.14
VEGFA-222ENST00000520948 MAP3K11Q16584 847 aa22.19■■□□□ 1.14
VEGFA-222ENST00000520948 MFSD14BQ5SR56 506 aa22.19■■□□□ 1.14
VEGFA-222ENST00000520948 WDR66Q8TBY9 1149 aa22.19■■□□□ 1.14
VEGFA-222ENST00000520948 TBC1D22AQ8WUA7 517 aa22.19■■□□□ 1.14
VEGFA-222ENST00000520948 CFHR5Q9BXR6 569 aa22.19■■□□□ 1.14
VEGFA-222ENST00000520948 HMG20BQ9P0W2 317 aa22.19■■□□□ 1.14
VEGFA-222ENST00000520948 SALL1Q9NSC2 1324 aa22.19■■□□□ 1.14
VEGFA-222ENST00000520948 MANSC4A6NHS7 340 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-222ENST00000520948 TTC39AQ5SRH9 613 aa22.18■■□□□ 1.14
VEGFA-222ENST00000520948 ANKRD45Q5TZF3 282 aa22.18■■□□□ 1.14
VEGFA-222ENST00000520948 FBXO46Q6PJ61 603 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-222ENST00000520948 IFNL1Q8IU54 200 aa22.18■■□□□ 1.14
VEGFA-222ENST00000520948 NEFLP07196 543 aa22.17■■□□□ 1.14
VEGFA-222ENST00000520948 RASA3Q14644 834 aa22.17■■□□□ 1.14
VEGFA-222ENST00000520948 GRIK5Q16478 980 aa22.17■■□□□ 1.14
VEGFA-222ENST00000520948 SUPT20HL1Q3ZLR7 823 aa22.17■■□□□ 1.14
VEGFA-222ENST00000520948 SPATA5Q8NB90 893 aa22.17■■□□□ 1.14
VEGFA-222ENST00000520948 IGF2BP3O00425 579 aaKnown RBP eCLIP22.16■■□□□ 1.14
VEGFA-222ENST00000520948 ALDH1A1P00352 501 aa22.16■■□□□ 1.14
VEGFA-222ENST00000520948 ZBTB48P10074 688 aaPredicted RBP22.16■■□□□ 1.14
VEGFA-222ENST00000520948 PI16Q6UXB8 463 aa22.16■■□□□ 1.14
VEGFA-222ENST00000520948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.16■■□□□ 1.14
VEGFA-222ENST00000520948 TTF2Q9UNY4 1162 aaKnown RBP22.16■■□□□ 1.14
VEGFA-222ENST00000520948 SUGT1Q9Y2Z0 365 aa22.16■■□□□ 1.14
VEGFA-222ENST00000520948 SALL3Q9BXA9 1300 aa22.15■■□□□ 1.14
VEGFA-222ENST00000520948 GJA5P36382 358 aa22.15■■□□□ 1.14
VEGFA-222ENST00000520948 NUCB1Q02818 461 aa22.15■■□□□ 1.14
VEGFA-222ENST00000520948 ERICH6BQ5W0A0 696 aa22.15■■□□□ 1.14
VEGFA-222ENST00000520948 USP2O75604 605 aaPredicted RBP22.14■■□□□ 1.13
VEGFA-222ENST00000520948 ATP5JP18859 108 aa22.14■■□□□ 1.13
VEGFA-222ENST00000520948 IREB2P48200 963 aaKnown RBP22.14■■□□□ 1.13
VEGFA-222ENST00000520948 INHBEP58166 350 aa22.14■■□□□ 1.13
VEGFA-222ENST00000520948 MRIQ9BWK5 157 aa22.14■■□□□ 1.13
VEGFA-222ENST00000520948 TDRD3Q9H7E2 651 aaKnown RBP22.14■■□□□ 1.13
VEGFA-222ENST00000520948 ZNF70Q9UC06 446 aaPredicted RBP22.14■■□□□ 1.13
VEGFA-222ENST00000520948 SPDYE2Q495Y8 402 aa22.13■■□□□ 1.13
VEGFA-222ENST00000520948 CDAN1Q8IWY9 1227 aa22.13■■□□□ 1.13
VEGFA-222ENST00000520948 BCL11AQ9H165 835 aa22.13■■□□□ 1.13
VEGFA-222ENST00000520948 TRIM17Q9Y577 477 aa22.13■■□□□ 1.13
VEGFA-222ENST00000520948 CYP2E1P05181 493 aaPredicted RBP22.12■■□□□ 1.13
VEGFA-222ENST00000520948 ZAP70P43403 619 aa22.12■■□□□ 1.13
VEGFA-222ENST00000520948 B4GALNT3Q6L9W6 998 aa22.12■■□□□ 1.13
VEGFA-222ENST00000520948 CHD1LQ86WJ1 897 aa22.12■■□□□ 1.13
VEGFA-222ENST00000520948 ANKRD13AQ8IZ07 590 aa22.12■■□□□ 1.13
VEGFA-222ENST00000520948 OTUD7AQ8TE49 926 aaPredicted RBP22.12■■□□□ 1.13
VEGFA-222ENST00000520948 ELP3Q9H9T3 547 aa22.12■■□□□ 1.13
VEGFA-222ENST00000520948 SNRKQ9NRH2 765 aa22.12■■□□□ 1.13
VEGFA-222ENST00000520948 PRDX5P30044 214 aa22.11■■□□□ 1.13
VEGFA-222ENST00000520948 HDLBPQ00341 1268 aaKnown RBP22.11■■□□□ 1.13
VEGFA-222ENST00000520948 TNFAIP1Q13829 316 aa22.11■■□□□ 1.13
VEGFA-222ENST00000520948 ZGPATQ8N5A5 531 aaKnown RBP22.11■■□□□ 1.13
VEGFA-222ENST00000520948 ECHDC1Q9NTX5 307 aa22.11■■□□□ 1.13
VEGFA-222ENST00000520948 SERPINA10Q9UK55 444 aa22.11■■□□□ 1.13
VEGFA-222ENST00000520948 UNCXA6NJT0 531 aa22.1■■□□□ 1.13
VEGFA-222ENST00000520948 TCP10L2B9ZVM9 353 aa22.1■■□□□ 1.13
VEGFA-222ENST00000520948 CRKP46108 304 aa22.1■■□□□ 1.13
VEGFA-222ENST00000520948 CRHR2Q13324 411 aa22.1■■□□□ 1.13
VEGFA-222ENST00000520948 PRPF38BQ5VTL8 546 aaKnown RBP22.1■■□□□ 1.13
VEGFA-222ENST00000520948 TBC1D9Q6ZT07 1266 aa22.1■■□□□ 1.13
VEGFA-222ENST00000520948 OTOP1Q7RTM1 612 aa22.1■■□□□ 1.13
VEGFA-222ENST00000520948 OPTNQ96CV9 577 aa22.1■■□□□ 1.13
VEGFA-222ENST00000520948 LDHBP07195 334 aaKnown RBP22.09■■□□□ 1.13
VEGFA-222ENST00000520948 SPTY2D1Q68D10 685 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-222ENST00000520948 CD99L2Q8TCZ2 262 aa22.09■■□□□ 1.13
VEGFA-222ENST00000520948 TEPSINQ96N21 525 aa22.09■■□□□ 1.13
VEGFA-222ENST00000520948 LNPKQ9C0E8 428 aa22.09■■□□□ 1.13
VEGFA-222ENST00000520948 TMEM39BQ9GZU3 492 aa22.09■■□□□ 1.13
VEGFA-222ENST00000520948 ZBTB47Q9UFB7 747 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-222ENST00000520948 STAP2Q9UGK3 403 aa22.09■■□□□ 1.13
VEGFA-222ENST00000520948 MYO5AQ9Y4I1 1855 aaKnown RBP22.09■■□□□ 1.13
VEGFA-222ENST00000520948 TTC41PQ6P2S7 1318 aa22.08■■□□□ 1.13
VEGFA-222ENST00000520948 IGSF3O75054 1194 aa22.08■■□□□ 1.13
VEGFA-222ENST00000520948 CNKSR2Q8WXI2 1034 aa22.08■■□□□ 1.13
VEGFA-222ENST00000520948 HAUS7Q99871 368 aa22.08■■□□□ 1.13
VEGFA-222ENST00000520948 PTPN18Q99952 460 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms