RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CNOT7Q9UIV1 285 aaKnown RBP17.01■□□□□ 0.31
SDC2-203ENST00000519587 DAGLAQ9Y4D2 1042 aa17.01■□□□□ 0.31
SDC2-203ENST00000519587 MAGEB6P1A0A0J9YX57 407 aa17■□□□□ 0.31
SDC2-203ENST00000519587 MYO1BO43795 1136 aa17■□□□□ 0.31
SDC2-203ENST00000519587 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
SDC2-203ENST00000519587 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
SDC2-203ENST00000519587 AIDAQ96BJ3 306 aa17■□□□□ 0.31
SDC2-203ENST00000519587 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
SDC2-203ENST00000519587 CFAP100Q494V2 611 aa16.99■□□□□ 0.31
SDC2-203ENST00000519587 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
SDC2-203ENST00000519587 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
SDC2-203ENST00000519587 MTMR14Q8NCE2 650 aa16.99■□□□□ 0.31
SDC2-203ENST00000519587 ZNF384Q8TF68 577 aa16.99■□□□□ 0.31
SDC2-203ENST00000519587 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
SDC2-203ENST00000519587 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
SDC2-203ENST00000519587 HACL1Q9UJ83 578 aa16.99■□□□□ 0.31
SDC2-203ENST00000519587 GPR75-ASB3A0A0A6YYF3 556 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 MBD4O95243 580 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 BTDP43251 543 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 MIGA1Q8NAN2 632 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 FAM227BQ96M60 508 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 ADARB2Q9NS39 739 aaKnown RBP16.98■□□□□ 0.31
SDC2-203ENST00000519587 CDK5RAP2Q96SN8 1893 aa16.98■□□□□ 0.31
SDC2-203ENST00000519587 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
SDC2-203ENST00000519587 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
SDC2-203ENST00000519587 GNAT2P19087 354 aa16.97■□□□□ 0.31
SDC2-203ENST00000519587 PPP4CP60510 307 aa16.97■□□□□ 0.31
SDC2-203ENST00000519587 ADGRA1Q86SQ6 560 aa16.97■□□□□ 0.31
SDC2-203ENST00000519587 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
SDC2-203ENST00000519587 CRNKL1Q9BZJ0 848 aaKnown RBP16.97■□□□□ 0.31
SDC2-203ENST00000519587 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.31
SDC2-203ENST00000519587 GPAA1O43292 621 aa16.96■□□□□ 0.31
SDC2-203ENST00000519587 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
SDC2-203ENST00000519587 ESYT1Q9BSJ8 1104 aa16.96■□□□□ 0.31
SDC2-203ENST00000519587 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
SDC2-203ENST00000519587 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
SDC2-203ENST00000519587 M0R2C6 588 aa16.95■□□□□ 0.3
SDC2-203ENST00000519587 SGSM2O43147 1006 aa16.95■□□□□ 0.3
SDC2-203ENST00000519587 REC8O95072 547 aa16.95■□□□□ 0.3
SDC2-203ENST00000519587 EPS15P42566 896 aa16.95■□□□□ 0.3
SDC2-203ENST00000519587 SLFNL1Q499Z3 407 aa16.95■□□□□ 0.3
SDC2-203ENST00000519587 TBC1D10BQ4KMP7 808 aaPredicted RBP16.95■□□□□ 0.3
SDC2-203ENST00000519587 APOBEC3HQ6NTF7 200 aaKnown RBP16.95■□□□□ 0.3
SDC2-203ENST00000519587 KIAA1211Q6ZU35 1233 aa16.95■□□□□ 0.3
SDC2-203ENST00000519587 RIOK1Q9BRS2 568 aaKnown RBP16.95■□□□□ 0.3
SDC2-203ENST00000519587 ARMT1Q9H993 441 aa16.95■□□□□ 0.3
SDC2-203ENST00000519587 SHTN1A0MZ66 631 aa16.94■□□□□ 0.3
SDC2-203ENST00000519587 CHGBP05060 677 aa16.94■□□□□ 0.3
SDC2-203ENST00000519587 EPHX2P34913 555 aa16.94■□□□□ 0.3
SDC2-203ENST00000519587 RBM26Q5T8P6 1007 aaKnown RBP16.94■□□□□ 0.3
SDC2-203ENST00000519587 USP50Q70EL3 339 aaPredicted RBP16.94■□□□□ 0.3
SDC2-203ENST00000519587 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
SDC2-203ENST00000519587 TEX11Q8IYF3 940 aa16.94■□□□□ 0.3
SDC2-203ENST00000519587 LCORLQ8N3X6 602 aa16.94■□□□□ 0.3
SDC2-203ENST00000519587 SEC62Q99442 399 aaKnown RBP16.94■□□□□ 0.3
SDC2-203ENST00000519587 USP40Q9NVE5 1235 aa16.94■□□□□ 0.3
SDC2-203ENST00000519587 WNT10BO00744 389 aa16.93■□□□□ 0.3
SDC2-203ENST00000519587 VEGFAP15692 232 aaPredicted RBP16.93■□□□□ 0.3
SDC2-203ENST00000519587 TNFAIP1Q13829 316 aa16.93■□□□□ 0.3
SDC2-203ENST00000519587 SAMD7Q7Z3H4 446 aa16.93■□□□□ 0.3
SDC2-203ENST00000519587 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
SDC2-203ENST00000519587 ZBED3Q96IU2 234 aaPredicted RBP16.93■□□□□ 0.3
SDC2-203ENST00000519587 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
SDC2-203ENST00000519587 STRBPQ96SI9 672 aaKnown RBP16.93■□□□□ 0.3
SDC2-203ENST00000519587 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
SDC2-203ENST00000519587 SLC4A4Q9Y6R1 1079 aa16.93■□□□□ 0.3
SDC2-203ENST00000519587 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
SDC2-203ENST00000519587 LAMB1P07942 1786 aa16.92■□□□□ 0.3
SDC2-203ENST00000519587 MYH1P12882 1939 aa16.92■□□□□ 0.3
SDC2-203ENST00000519587 USP5P45974 858 aa16.92■□□□□ 0.3
SDC2-203ENST00000519587 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
SDC2-203ENST00000519587 SPDYE2Q495Y8 402 aa16.92■□□□□ 0.3
SDC2-203ENST00000519587 FKBP1CQ5VVH2 108 aa16.92■□□□□ 0.3
SDC2-203ENST00000519587 CDC42EP5Q6NZY7 148 aa16.92■□□□□ 0.3
SDC2-203ENST00000519587 CCDC129Q6ZRS4 1044 aa16.92■□□□□ 0.3
SDC2-203ENST00000519587 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
SDC2-203ENST00000519587 TRPM4Q8TD43 1214 aa16.92■□□□□ 0.3
SDC2-203ENST00000519587 TAF1DQ9H5J8 278 aaPredicted RBP16.92■□□□□ 0.3
SDC2-203ENST00000519587 TDRD3Q9H7E2 651 aaKnown RBP16.92■□□□□ 0.3
SDC2-203ENST00000519587 LAMA4Q16363 1823 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 APPP05067 770 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 TNNI2P48788 182 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 RHBDL3P58872 404 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 GIMAP6Q6P9H5 292 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 APOBEC3FQ8IUX4 373 aaKnown RBP16.91■□□□□ 0.3
SDC2-203ENST00000519587 AMOTL1Q8IY63 956 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 VEZTQ9HBM0 779 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 ANO2Q9NQ90 1003 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 ATP8A2Q9NTI2 1148 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 ZNF70Q9UC06 446 aaPredicted RBP16.91■□□□□ 0.3
SDC2-203ENST00000519587 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
SDC2-203ENST00000519587 PITPNM2Q9BZ72 1349 aa16.91■□□□□ 0.3
SDC2-203ENST00000519587 CLRN2A0PK11 232 aa16.9■□□□□ 0.3
SDC2-203ENST00000519587 EGFRP00533 1210 aa16.9■□□□□ 0.3
SDC2-203ENST00000519587 TDO2P48775 406 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms