RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 USP26Q9BXU7 913 aa7.4□□□□□ -1.22
LINC01339-203ENST00000519336 PPT2Q9UMR5 302 aa7.4□□□□□ -1.22
LINC01339-203ENST00000519336 ROBO2Q9HCK4 1378 aa7.4□□□□□ -1.22
LINC01339-203ENST00000519336 OIP5O43482 229 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 ECEL1O95672 775 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 BCRP11274 1271 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 MAOBP27338 520 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 NLRP12P59046 1061 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 PTPN11Q06124 597 aaPredicted RBP7.39□□□□□ -1.23
LINC01339-203ENST00000519336 MPP2Q14168 576 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 SLITRK4Q8IW52 837 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 KLHDC7BQ96G42 594 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 SOX17Q9H6I2 414 aaPredicted RBP7.39□□□□□ -1.23
LINC01339-203ENST00000519336 ZNF408Q9H9D4 720 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 PCDHA4Q9UN74 947 aa7.39□□□□□ -1.23
LINC01339-203ENST00000519336 ZCCHC6Q5VYS8 1495 aaKnown RBP7.38□□□□□ -1.23
LINC01339-203ENST00000519336 FAM221AA4D161 298 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 SHISA8B8ZZ34 492 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 ETFBP38117 255 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 SOX9P48436 509 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 ZNF165P49910 485 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 CCDC144BQ3MJ40 725 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 SOGA3Q5TF21 947 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 GK5Q6ZS86 529 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 PDZD3Q86UT5 571 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 GPBAR1Q8TDU6 330 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 WNT8BQ93098 351 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 GAL3ST3Q96A11 431 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 CRBNQ96SW2 442 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 SRRTQ9BXP5 876 aaKnown RBP7.38□□□□□ -1.23
LINC01339-203ENST00000519336 ZSWIM4Q9H7M6 989 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 BRMS1Q9HCU9 246 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 OSGEPQ9NPF4 335 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 STRIP2Q9ULQ0 834 aa7.38□□□□□ -1.23
LINC01339-203ENST00000519336 R3HCC1Q9Y3T6 440 aaKnown RBP7.38□□□□□ -1.23
LINC01339-203ENST00000519336 SMARCA5O60264 1052 aaPredicted RBP7.37□□□□□ -1.23
LINC01339-203ENST00000519336 GRIN3BO60391 1043 aa7.37□□□□□ -1.23
LINC01339-203ENST00000519336 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
LINC01339-203ENST00000519336 CILPO75339 1184 aa7.37□□□□□ -1.23
LINC01339-203ENST00000519336 TRIM37O94972 964 aa7.37□□□□□ -1.23
LINC01339-203ENST00000519336 RBL2Q08999 1139 aa7.37□□□□□ -1.23
LINC01339-203ENST00000519336 ZNF252P-AS1Q0IIN9 211 aa7.37□□□□□ -1.23
LINC01339-203ENST00000519336 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.37□□□□□ -1.23
LINC01339-203ENST00000519336 REC114Q7Z4M0 266 aa7.37□□□□□ -1.23
LINC01339-203ENST00000519336 DDX3YO15523 660 aaKnown RBP7.36□□□□□ -1.23
LINC01339-203ENST00000519336 CDK8P49336 464 aa7.36□□□□□ -1.23
LINC01339-203ENST00000519336 EIF6P56537 245 aaKnown RBP7.36□□□□□ -1.23
LINC01339-203ENST00000519336 RPL6Q02878 288 aaKnown RBP7.36□□□□□ -1.23
LINC01339-203ENST00000519336 TRAPPC3LQ5T215 181 aa7.36□□□□□ -1.23
LINC01339-203ENST00000519336 LYPD4Q6UWN0 246 aa7.36□□□□□ -1.23
LINC01339-203ENST00000519336 ANKS3Q6ZW76 656 aa7.36□□□□□ -1.23
LINC01339-203ENST00000519336 NEDD1Q8NHV4 660 aa7.36□□□□□ -1.23
LINC01339-203ENST00000519336 LRRC3Q9BY71 257 aa7.36□□□□□ -1.23
LINC01339-203ENST00000519336 TRIM55Q9BYV6 548 aa7.36□□□□□ -1.23
LINC01339-203ENST00000519336 CCDC86Q9H6F5 360 aaKnown RBP7.36□□□□□ -1.23
LINC01339-203ENST00000519336 CELA2BP08218 269 aaPredicted RBP7.35□□□□□ -1.23
LINC01339-203ENST00000519336 LIG1P18858 919 aa7.35□□□□□ -1.23
LINC01339-203ENST00000519336 GMPRP36959 345 aa7.35□□□□□ -1.23
LINC01339-203ENST00000519336 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC01339-203ENST00000519336 BMS1Q14692 1282 aaKnown RBP7.35□□□□□ -1.23
LINC01339-203ENST00000519336 SUZ12Q15022 739 aaKnown RBP7.35□□□□□ -1.23
LINC01339-203ENST00000519336 SETDB1Q15047 1291 aa7.35□□□□□ -1.23
LINC01339-203ENST00000519336 KLHL23Q8NBE8 558 aa7.35□□□□□ -1.23
LINC01339-203ENST00000519336 GALNT11Q8NCW6 608 aa7.35□□□□□ -1.23
LINC01339-203ENST00000519336 PCDHB14Q9Y5E9 798 aa7.35□□□□□ -1.23
LINC01339-203ENST00000519336 U2SURPO15042 1029 aaKnown RBP7.34□□□□□ -1.23
LINC01339-203ENST00000519336 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
LINC01339-203ENST00000519336 CLCQ05315 142 aa7.34□□□□□ -1.23
LINC01339-203ENST00000519336 WIPI1Q5MNZ9 446 aaPredicted RBP7.34□□□□□ -1.23
LINC01339-203ENST00000519336 HNRNPLLQ8WVV9 542 aaKnown RBP7.34□□□□□ -1.23
LINC01339-203ENST00000519336 ELMO3Q96BJ8 720 aa7.34□□□□□ -1.23
LINC01339-203ENST00000519336 OSBPL2Q9H1P3 480 aa7.34□□□□□ -1.23
LINC01339-203ENST00000519336 RAD18Q9NS91 495 aa7.34□□□□□ -1.23
LINC01339-203ENST00000519336 DCDC2CA8MYV0 355 aa7.33□□□□□ -1.24
LINC01339-203ENST00000519336 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
LINC01339-203ENST00000519336 CTSBP07858 339 aa7.33□□□□□ -1.24
LINC01339-203ENST00000519336 CD68P34810 354 aaPredicted RBP7.33□□□□□ -1.24
LINC01339-203ENST00000519336 SCARA3Q6AZY7 606 aa7.33□□□□□ -1.24
LINC01339-203ENST00000519336 HDXQ7Z353 690 aa7.33□□□□□ -1.24
LINC01339-203ENST00000519336 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
LINC01339-203ENST00000519336 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
LINC01339-203ENST00000519336 PLPPR2Q96GM1 343 aa7.33□□□□□ -1.24
LINC01339-203ENST00000519336 PICK1Q9NRD5 415 aa7.33□□□□□ -1.24
LINC01339-203ENST00000519336 CSADQ9Y600 493 aa7.33□□□□□ -1.24
LINC01339-203ENST00000519336 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 NID1P14543 1247 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 INPP5AQ14642 412 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 HP1BP3Q5SSJ5 553 aaPredicted RBP7.32□□□□□ -1.24
LINC01339-203ENST00000519336 GIMAP6Q6P9H5 292 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 LRFN4Q6PJG9 635 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 MAP4K3Q8IVH8 894 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 REXO1Q8N1G1 1221 aaKnown RBP7.32□□□□□ -1.24
LINC01339-203ENST00000519336 WDR89Q96FK6 387 aaPredicted RBP7.32□□□□□ -1.24
LINC01339-203ENST00000519336 SHDQ96IW2 340 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 PRDM6Q9NQX0 595 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 KRT82Q9NSB4 513 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 PRKAG3Q9UGI9 489 aa7.32□□□□□ -1.24
LINC01339-203ENST00000519336 POLR3KQ9Y2Y1 108 aaPredicted RBP7.32□□□□□ -1.24
LINC01339-203ENST00000519336 LOC100289279A0A1B0GTE1 492 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms