RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 USP26Q9BXU7 913 aa7.26□□□□□ -1.25
SQLE-202ENST00000518604 KCNK4Q9NYG8 393 aa7.26□□□□□ -1.25
SQLE-202ENST00000518604 C9orf172C9J069 976 aa7.25□□□□□ -1.25
SQLE-202ENST00000518604 RNF225M0QZC1 329 aaPredicted RBP7.25□□□□□ -1.25
SQLE-202ENST00000518604 DDX3YO15523 660 aaKnown RBP7.25□□□□□ -1.25
SQLE-202ENST00000518604 PF4P02776 101 aa7.25□□□□□ -1.25
SQLE-202ENST00000518604 NRG1Q02297 640 aaPredicted RBP7.25□□□□□ -1.25
SQLE-202ENST00000518604 GRIN3AQ8TCU5 1115 aa7.25□□□□□ -1.25
SQLE-202ENST00000518604 LENG1Q96BZ8 264 aaPredicted RBP7.25□□□□□ -1.25
SQLE-202ENST00000518604 SPATA32Q96LK8 384 aa7.25□□□□□ -1.25
SQLE-202ENST00000518604 SPON2Q9BUD6 331 aa7.25□□□□□ -1.25
SQLE-202ENST00000518604 TLR6Q9Y2C9 796 aa7.25□□□□□ -1.25
SQLE-202ENST00000518604 SUPT16HQ9Y5B9 1047 aaKnown RBP7.25□□□□□ -1.25
SQLE-202ENST00000518604 PCDHGB7Q9Y5F8 929 aa7.25□□□□□ -1.25
SQLE-202ENST00000518604 FAM229AH3BQW9 127 aa7.24□□□□□ -1.25
SQLE-202ENST00000518604 GREM1O60565 184 aa7.24□□□□□ -1.25
SQLE-202ENST00000518604 APBA3O96018 575 aa7.24□□□□□ -1.25
SQLE-202ENST00000518604 SLFN14P0C7P3 912 aa7.24□□□□□ -1.25
SQLE-202ENST00000518604 GNL2Q13823 731 aaKnown RBP7.24□□□□□ -1.25
SQLE-202ENST00000518604 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
SQLE-202ENST00000518604 MAP1SQ66K74 1059 aaPredicted RBP7.24□□□□□ -1.25
SQLE-202ENST00000518604 KIAA0825Q8IV33 1275 aa7.24□□□□□ -1.25
SQLE-202ENST00000518604 ZNF296Q8WUU4 475 aaPredicted RBP7.24□□□□□ -1.25
SQLE-202ENST00000518604 CCDC86Q9H6F5 360 aaKnown RBP7.24□□□□□ -1.25
SQLE-202ENST00000518604 ADAMTS1Q9UHI8 967 aa7.24□□□□□ -1.25
SQLE-202ENST00000518604 GARTP22102 1010 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 COL8A1P27658 744 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 PDE3AQ14432 1141 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 KIF4BQ2VIQ3 1234 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 SNAP47Q5SQN1 464 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 FBXL19Q6PCT2 694 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.23□□□□□ -1.25
SQLE-202ENST00000518604 GOLM1Q8NBJ4 401 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 GATAD2BQ8WXI9 593 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 RUSC1Q9BVN2 902 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 TMPRSS13Q9BYE2 586 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 RNF208Q9H0X6 261 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 SUGCTQ9HAC7 445 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 PCDHB5Q9Y5E4 795 aa7.23□□□□□ -1.25
SQLE-202ENST00000518604 ECEL1O95672 775 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 SELPP16109 830 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 KCNMA1Q12791 1236 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 GRIK4Q16099 956 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 FAM196AQ6ZSG2 479 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 KIAA1211Q6ZU35 1233 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 ACAD11Q709F0 780 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 SLC43A3Q8NBI5 491 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 SMG8Q8ND04 991 aaKnown RBP7.22□□□□□ -1.25
SQLE-202ENST00000518604 GPBAR1Q8TDU6 330 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 UBASH3BQ8TF42 649 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 GAL3ST3Q96A11 431 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 ACBD3Q9H3P7 528 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 CYP4F12Q9HCS2 524 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 RAD18Q9NS91 495 aa7.22□□□□□ -1.25
SQLE-202ENST00000518604 FAM221AA4D161 298 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 F6X3S4 739 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 F8W735 103 aaPredicted RBP7.21□□□□□ -1.26
SQLE-202ENST00000518604 ZNF862O60290 1169 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 AOC2O75106 756 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 DLGAP3O95886 979 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 CTSBP07858 339 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 GJA8P48165 433 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 FAM160A1Q05DH4 1040 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 NUTM2GQ5VZR2 741 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 VPS37DQ86XT2 251 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 ACSBG1Q96GR2 724 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 LRRC3Q9BY71 257 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 ZC3H12CQ9C0D7 883 aaKnown RBP7.21□□□□□ -1.26
SQLE-202ENST00000518604 INPP5FQ9Y2H2 1132 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 SNCAIPQ9Y6H5 919 aa7.21□□□□□ -1.26
SQLE-202ENST00000518604 CILPO75339 1184 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 WISP1O95388 367 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 RPL6Q02878 288 aaKnown RBP7.2□□□□□ -1.26
SQLE-202ENST00000518604 PAK2Q13177 524 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 COL9A2Q14055 689 aaPredicted RBP7.2□□□□□ -1.26
SQLE-202ENST00000518604 MPP2Q14168 576 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 NAALADL2Q58DX5 795 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 ANKRD34AQ69YU3 496 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 RASGRP4Q8TDF6 673 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 JARID2Q92833 1246 aaPredicted RBP7.2□□□□□ -1.26
SQLE-202ENST00000518604 GPRASP2Q96D09 838 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 WDR18Q9BV38 432 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 AKTIPQ9H8T0 292 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 USP21Q9UK80 565 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 PCDHA4Q9UN74 947 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 TACC3Q9Y6A5 838 aa7.2□□□□□ -1.26
SQLE-202ENST00000518604 BPNT1O95861 308 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 F13A1P00488 732 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 LIG1P18858 919 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 PTPN11Q06124 597 aaPredicted RBP7.19□□□□□ -1.26
SQLE-202ENST00000518604 SEPT6Q14141 434 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 SHISA2Q6UWI4 295 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 MPRIPQ6WCQ1 1025 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 BNC2Q6ZN30 1099 aaPredicted RBP7.19□□□□□ -1.26
SQLE-202ENST00000518604 EAF1Q96JC9 268 aaPredicted RBP7.19□□□□□ -1.26
SQLE-202ENST00000518604 TINF2Q9BSI4 451 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 CEP41Q9BYV8 373 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 CAPN10Q9HC96 672 aa7.19□□□□□ -1.26
SQLE-202ENST00000518604 APOBRQ0VD83 1088 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms