RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 ZDHHC1Q8WTX9 485 aa10.74□□□□□ -0.69
NPM1-204ENST00000517671 VTI1AQ96AJ9 217 aa10.74□□□□□ -0.69
NPM1-204ENST00000517671 RUBCNLQ9H714 662 aa10.74□□□□□ -0.69
NPM1-204ENST00000517671 NEUROD4Q9HD90 331 aa10.74□□□□□ -0.69
NPM1-204ENST00000517671 BCS1LQ9Y276 419 aa10.74□□□□□ -0.69
NPM1-204ENST00000517671 LBRQ14739 615 aaKnown RBP10.73□□□□□ -0.69
NPM1-204ENST00000517671 TMEM164Q5U3C3 297 aa10.73□□□□□ -0.69
NPM1-204ENST00000517671 LINC00116Q8NCU8 138 aa10.73□□□□□ -0.69
NPM1-204ENST00000517671 CUEDC1Q9NWM3 386 aaPredicted RBP10.73□□□□□ -0.69
NPM1-204ENST00000517671 PIM2Q9P1W9 311 aa10.73□□□□□ -0.69
NPM1-204ENST00000517671 GJA3Q9Y6H8 435 aa10.73□□□□□ -0.69
NPM1-204ENST00000517671 C21orf2O43822 256 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 RPS6KA4O75676 772 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 PHKG2P15735 406 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 AMOTQ4VCS5 1084 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 KLRG1Q96E93 195 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 DCAF5Q96JK2 942 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.72□□□□□ -0.695e-11■■■■■ 93.2
NPM1-204ENST00000517671 ASAP1Q9ULH1 1129 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 HCN4Q9Y3Q4 1203 aa10.72□□□□□ -0.69
NPM1-204ENST00000517671 DOT1LQ8TEK3 1739 aa10.71□□□□□ -0.69
NPM1-204ENST00000517671 EML1O00423 815 aa10.71□□□□□ -0.69
NPM1-204ENST00000517671 PPM1GO15355 546 aaPredicted RBP10.71□□□□□ -0.69
NPM1-204ENST00000517671 DALRD3Q5D0E6 543 aaKnown RBP10.71□□□□□ -0.69
NPM1-204ENST00000517671 JMYQ8N9B5 988 aa10.71□□□□□ -0.69
NPM1-204ENST00000517671 C2orf49Q9BVC5 232 aaPredicted RBP10.71□□□□□ -0.69
NPM1-204ENST00000517671 ATG3Q9NT62 314 aa10.71□□□□□ -0.69
NPM1-204ENST00000517671 CNTNAP4Q9C0A0 1308 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 A0A0G2JLW4 131 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 PRMT3O60678 531 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 WEE1P30291 646 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 TXLNAP40222 546 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 ITPK1Q13572 414 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 PLEKHO1Q53GL0 409 aaPredicted RBP10.7□□□□□ -0.7
NPM1-204ENST00000517671 C1orf53Q5VUE5 145 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 GTPBP3Q969Y2 492 aaKnown RBP10.7□□□□□ -0.7
NPM1-204ENST00000517671 ZNF837Q96EG3 531 aaPredicted RBP10.7□□□□□ -0.7
NPM1-204ENST00000517671 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 C4BP0C0L5 1744 aa10.7□□□□□ -0.7
NPM1-204ENST00000517671 A0A1W2PNR3 127 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 ATP4AP20648 1035 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 HIRAP54198 1017 aaPredicted RBP10.69□□□□□ -0.7
NPM1-204ENST00000517671 C9orf131Q5VYM1 1079 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 FIGNL1Q6PIW4 674 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 AMIGO3Q86WK7 504 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 SMC1BQ8NDV3 1235 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 RHPN1Q8TCX5 695 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 PRIMPOLQ96LW4 560 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 C5P01031 1676 aa10.69□□□□□ -0.7
NPM1-204ENST00000517671 NCAPD2Q15021 1401 aa10.68□□□□□ -0.7
NPM1-204ENST00000517671 GYS1P13807 737 aa10.68□□□□□ -0.7
NPM1-204ENST00000517671 DPEP1P16444 411 aa10.68□□□□□ -0.7
NPM1-204ENST00000517671 CABP4P57796 275 aa10.68□□□□□ -0.7
NPM1-204ENST00000517671 SUZ12Q15022 739 aaKnown RBP10.68□□□□□ -0.7
NPM1-204ENST00000517671 SH3PXD2AQ5TCZ1 1133 aa10.68□□□□□ -0.7
NPM1-204ENST00000517671 NLRP8Q86W28 1048 aa10.68□□□□□ -0.7
NPM1-204ENST00000517671 PHACTR1Q9C0D0 580 aa10.68□□□□□ -0.7
NPM1-204ENST00000517671 PHF24Q9UPV7 400 aa10.68□□□□□ -0.7
NPM1-204ENST00000517671 GPC6Q9Y625 555 aaPredicted RBP10.68□□□□□ -0.7
NPM1-204ENST00000517671 CICQ96RK0 1608 aaPredicted RBP10.68□□□□□ -0.7
NPM1-204ENST00000517671 PXDNLA1KZ92 1463 aa10.67□□□□□ -0.7
NPM1-204ENST00000517671 KCNMA1Q12791 1236 aa10.67□□□□□ -0.7
NPM1-204ENST00000517671 ALDH16A1Q8IZ83 802 aa10.67□□□□□ -0.7
NPM1-204ENST00000517671 GPR161Q8N6U8 529 aaKnown RBP10.67□□□□□ -0.7
NPM1-204ENST00000517671 CLP1Q92989 425 aaKnown RBP10.67□□□□□ -0.7
NPM1-204ENST00000517671 ZIC5Q96T25 663 aa10.67□□□□□ -0.7
NPM1-204ENST00000517671 NMRK2Q9NPI5 230 aa10.67□□□□□ -0.7
NPM1-204ENST00000517671 TUBGCP6Q96RT7 1819 aa10.67□□□□□ -0.7
NPM1-204ENST00000517671 C10orf71Q711Q0 1435 aa10.67□□□□□ -0.7
NPM1-204ENST00000517671 C1orf141Q5JVX7 400 aa10.66□□□□□ -0.7
NPM1-204ENST00000517671 ANKIB1Q9P2G1 1089 aa10.66□□□□□ -0.7
NPM1-204ENST00000517671 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
NPM1-204ENST00000517671 VEGFAP15692 232 aaPredicted RBP10.65□□□□□ -0.7
NPM1-204ENST00000517671 KCNA3P22001 575 aa10.65□□□□□ -0.7
NPM1-204ENST00000517671 MTHFSP49914 203 aa10.65□□□□□ -0.7
NPM1-204ENST00000517671 PRELPP51888 382 aa10.65□□□□□ -0.7
NPM1-204ENST00000517671 PDE4CQ08493 712 aa10.65□□□□□ -0.7
NPM1-204ENST00000517671 HIF1AQ16665 826 aa10.65□□□□□ -0.7
NPM1-204ENST00000517671 COL25A1Q9BXS0 654 aaPredicted RBP10.65□□□□□ -0.7
NPM1-204ENST00000517671 RNF181Q9P0P0 153 aa10.65□□□□□ -0.7
NPM1-204ENST00000517671 POLKQ9UBT6 870 aa10.65□□□□□ -0.7
NPM1-204ENST00000517671 GPR25O00155 361 aa10.64□□□□□ -0.71
NPM1-204ENST00000517671 CFHR5Q9BXR6 569 aa10.64□□□□□ -0.71
NPM1-204ENST00000517671 ZCCHC2Q9C0B9 1178 aaKnown RBP10.64□□□□□ -0.71
NPM1-204ENST00000517671 RRAGCQ9HB90 399 aa10.64□□□□□ -0.71
NPM1-204ENST00000517671 PCDHGC4Q9Y5F7 938 aa10.64□□□□□ -0.71
NPM1-204ENST00000517671 LMNB1P20700 586 aa10.63□□□□□ -0.71
NPM1-204ENST00000517671 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
NPM1-204ENST00000517671 KDRP35968 1356 aa10.63□□□□□ -0.71
NPM1-204ENST00000517671 GLTPD2A6NH11 291 aa10.62□□□□□ -0.71
NPM1-204ENST00000517671 ATXN7O15265 892 aaPredicted RBP10.62□□□□□ -0.71
NPM1-204ENST00000517671 ATP2B4P23634 1241 aa10.62□□□□□ -0.71
NPM1-204ENST00000517671 CRKLP46109 303 aaKnown RBP10.62□□□□□ -0.71
NPM1-204ENST00000517671 GSK3AP49840 483 aa10.62□□□□□ -0.71
NPM1-204ENST00000517671 EIF4A2Q14240 407 aaKnown RBP10.62□□□□□ -0.71
NPM1-204ENST00000517671 LRRC69Q6ZNQ3 347 aa10.62□□□□□ -0.71
NPM1-204ENST00000517671 KCTD17Q8N5Z5 321 aa10.62□□□□□ -0.71
NPM1-204ENST00000517671 CNTNAP3BQ96NU0 1288 aa10.62□□□□□ -0.71
NPM1-204ENST00000517671 CNTNAP3Q9BZ76 1288 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms