RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 DDX54Q8TDD1 881 aaKnown RBP4.78□□□□□ -1.64
SNORA40.15-201ENST00000516884 MISP3Q96FF7 219 aa4.78□□□□□ -1.64
SNORA40.15-201ENST00000516884 CORO1BQ9BR76 489 aa4.78□□□□□ -1.64
SNORA40.15-201ENST00000516884 ABCB6Q9NP58 842 aa4.78□□□□□ -1.64
SNORA40.15-201ENST00000516884 CRIM1Q9NZV1 1036 aa4.78□□□□□ -1.64
SNORA40.15-201ENST00000516884 PPP1R9AQ9ULJ8 1098 aa4.78□□□□□ -1.64
SNORA40.15-201ENST00000516884 TMPRSS2O15393 492 aa4.77□□□□□ -1.65
SNORA40.15-201ENST00000516884 SPRED2Q7Z698 418 aa4.77□□□□□ -1.65
SNORA40.15-201ENST00000516884 LRRC4CQ9HCJ2 640 aa4.77□□□□□ -1.65
SNORA40.15-201ENST00000516884 ANO2Q9NQ90 1003 aa4.77□□□□□ -1.65
SNORA40.15-201ENST00000516884 AP4E1Q9UPM8 1137 aa4.77□□□□□ -1.65
SNORA40.15-201ENST00000516884 SLC5A6Q9Y289 635 aa4.77□□□□□ -1.65
SNORA40.15-201ENST00000516884 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.77□□□□□ -1.65
SNORA40.15-201ENST00000516884 CARMIL2Q6F5E8 1435 aa4.77□□□□□ -1.65
SNORA40.15-201ENST00000516884 ABL1P00519 1130 aa4.76□□□□□ -1.65
SNORA40.15-201ENST00000516884 NEFLP07196 543 aa4.76□□□□□ -1.65
SNORA40.15-201ENST00000516884 ZNF574Q6ZN55 896 aaPredicted RBP4.76□□□□□ -1.65
SNORA40.15-201ENST00000516884 GLIS3Q8NEA6 775 aa4.76□□□□□ -1.65
SNORA40.15-201ENST00000516884 C1orf115Q9H7X2 142 aa4.76□□□□□ -1.65
SNORA40.15-201ENST00000516884 KRT82Q9NSB4 513 aa4.76□□□□□ -1.65
SNORA40.15-201ENST00000516884 CARNS1A5YM72 827 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 CPNE3O75131 537 aaKnown RBP4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 FUT4P22083 530 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 FAAP100Q0VG06 881 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 ORC1Q13415 861 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 KIF4BQ2VIQ3 1234 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 ZNF792Q3KQV3 632 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 CYP27C1Q4G0S4 372 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 CITED4Q96RK1 184 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 DNAJC25Q9H1X3 360 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 CCDC86Q9H6F5 360 aaKnown RBP4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 MKNK2Q9HBH9 465 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 NPHS2Q9NP85 383 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 RAD18Q9NS91 495 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 USTQ9Y2C2 406 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 DAGLAQ9Y4D2 1042 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 U3KQE9 123 aa4.75□□□□□ -1.65
SNORA40.15-201ENST00000516884 TMEM238LA0A1B0GVL6 79 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 ZNF862O60290 1169 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 PDE3BQ13370 1112 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 ATG4DQ86TL0 474 aaPredicted RBP4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 PDZD3Q86UT5 571 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 NETO1Q8TDF5 533 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 WDR89Q96FK6 387 aaPredicted RBP4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 FANCD2OSQ96PS1 177 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 EHD4Q9H223 541 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 DISC1Q9NRI5 854 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 BRPF3Q9ULD4 1205 aa4.74□□□□□ -1.65
SNORA40.15-201ENST00000516884 H3BRB1 525 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 GPR182O15218 404 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 ID3Q02535 119 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 PRKCQQ04759 706 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 PDE3AQ14432 1141 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 PLCL1Q15111 1095 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 PLD6Q8N2A8 252 aaKnown RBP4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 CCDC74AQ96AQ1 378 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 ATXN3LQ9H3M9 355 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 TUT1Q9H6E5 874 aaKnown RBP4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 MBNL3Q9NUK0 354 aaKnown RBP4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 CACNA2D2Q9NY47 1150 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 ADAMTS6Q9UKP5 1117 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 VAV3Q9UKW4 847 aa4.73□□□□□ -1.65
SNORA40.15-201ENST00000516884 BIN1O00499 593 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 EIF1AYO14602 144 aaKnown RBP4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 NDUFB5O43674 189 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 GSTP1P09211 210 aaKnown RBP4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 FAM87AP0C7U9 286 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 CD8BP10966 210 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 LIG1P18858 919 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 SERPINB4P48594 390 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 CDK5R2Q13319 367 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 GRM2Q14416 872 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 B4GALNT3Q6L9W6 998 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 ALKBH8Q96BT7 664 aaKnown RBP4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 TNKS2Q9H2K2 1166 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 TRAK1Q9UPV9 953 aa4.72□□□□□ -1.65
SNORA40.15-201ENST00000516884 NEFMP07197 916 aa4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 RNASE1P07998 156 aaKnown RBP4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 OXCT1P55809 520 aa4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 BNIP3Q12983 259 aa4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 FAM214BQ7L5A3 538 aa4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 GLYCTKQ8IVS8 523 aa4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 SMYD4Q8IYR2 804 aaPredicted RBP4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 FAM181AQ8N9Y4 354 aa4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 DUSP23Q9BVJ7 150 aa4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 PLAGL2Q9UPG8 496 aa4.71□□□□□ -1.66
SNORA40.15-201ENST00000516884 SLFN14P0C7P3 912 aa4.7□□□□□ -1.66
SNORA40.15-201ENST00000516884 IFI16Q16666 785 aaKnown RBP4.7□□□□□ -1.66
SNORA40.15-201ENST00000516884 ZC3H12AQ5D1E8 599 aaKnown RBP4.7□□□□□ -1.66
SNORA40.15-201ENST00000516884 TXNDC2Q86VQ3 553 aa4.7□□□□□ -1.66
SNORA40.15-201ENST00000516884 FLAD1Q8NFF5 587 aa4.7□□□□□ -1.66
SNORA40.15-201ENST00000516884 LGR6Q9HBX8 967 aa4.7□□□□□ -1.66
SNORA40.15-201ENST00000516884 LEFTY1O75610 366 aa4.69□□□□□ -1.66
SNORA40.15-201ENST00000516884 CEACAM5P06731 702 aa4.69□□□□□ -1.66
SNORA40.15-201ENST00000516884 ERVK-24P63145 666 aa4.69□□□□□ -1.66
SNORA40.15-201ENST00000516884 TTLL4Q14679 1199 aa4.69□□□□□ -1.66
SNORA40.15-201ENST00000516884 ZNF648Q5T619 568 aaPredicted RBP4.69□□□□□ -1.66
SNORA40.15-201ENST00000516884 SPOCD1Q6ZMY3 1216 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms