RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 A0A1B0GUL6 1792 aa10.99□□□□□ -0.65
NR1I3-230ENST00000511944 SGSM2O43147 1006 aa10.99□□□□□ -0.65
NR1I3-230ENST00000511944 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
NR1I3-230ENST00000511944 TIMM10P62072 90 aa10.99□□□□□ -0.65
NR1I3-230ENST00000511944 CHRNDQ07001 517 aa10.99□□□□□ -0.65
NR1I3-230ENST00000511944 TTC39AQ5SRH9 613 aa10.99□□□□□ -0.65
NR1I3-230ENST00000511944 C15orf52Q6ZUT6 534 aaKnown RBP10.99□□□□□ -0.65
NR1I3-230ENST00000511944 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
NR1I3-230ENST00000511944 MINPP1Q9UNW1 487 aa10.99□□□□□ -0.65
NR1I3-230ENST00000511944 DUOX1Q9NRD9 1551 aa10.99□□□□□ -0.65
NR1I3-230ENST00000511944 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 AK9Q5TCS8 1911 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 MCCP23508 829 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 ANAPC15P60006 121 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 BOLA2Q9H3K6 86 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 PAG1Q9NWQ8 432 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 LEMD3Q9Y2U8 911 aa10.98□□□□□ -0.65
NR1I3-230ENST00000511944 MMP10P09238 476 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 NPR1P16066 1061 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 ALDH1B1P30837 517 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 CELF1Q92879 486 aaKnown RBP10.97□□□□□ -0.65
NR1I3-230ENST00000511944 FSD1Q9BTV5 496 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 USP26Q9BXU7 913 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 GNL3LQ9NVN8 582 aaKnown RBP10.97□□□□□ -0.65
NR1I3-230ENST00000511944 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 XDHP47989 1333 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 MED23Q9ULK4 1368 aa10.97□□□□□ -0.65
NR1I3-230ENST00000511944 ACTN4O43707 911 aaKnown RBP10.96□□□□□ -0.65
NR1I3-230ENST00000511944 SRGNP10124 158 aa10.96□□□□□ -0.65
NR1I3-230ENST00000511944 FUT2Q10981 343 aa10.96□□□□□ -0.65
NR1I3-230ENST00000511944 CAVIN4Q5BKX8 364 aa10.96□□□□□ -0.65
NR1I3-230ENST00000511944 SPIRE2Q8WWL2 714 aa10.96□□□□□ -0.65
NR1I3-230ENST00000511944 IPO9Q96P70 1041 aaKnown RBP10.96□□□□□ -0.65
NR1I3-230ENST00000511944 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.96□□□□□ -0.65
NR1I3-230ENST00000511944 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
NR1I3-230ENST00000511944 HELLSQ9NRZ9 838 aa10.96□□□□□ -0.65
NR1I3-230ENST00000511944 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 ADORA1P30542 326 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 GRIPAP1Q4V328 841 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 KIAA1211Q6ZU35 1233 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 HLA-CQ95604 372 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 MASTLQ96GX5 879 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 BCL11AQ9H165 835 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 COL4A1P02462 1669 aa10.95□□□□□ -0.66
NR1I3-230ENST00000511944 ATP2B4P23634 1241 aa10.94□□□□□ -0.66
NR1I3-230ENST00000511944 BECN1Q14457 450 aa10.94□□□□□ -0.66
NR1I3-230ENST00000511944 PUS10Q3MIT2 529 aaKnown RBP10.94□□□□□ -0.66
NR1I3-230ENST00000511944 SP8Q8IXZ3 490 aa10.94□□□□□ -0.66
NR1I3-230ENST00000511944 DNAJC2Q99543 621 aaKnown RBP10.94□□□□□ -0.66
NR1I3-230ENST00000511944 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
NR1I3-230ENST00000511944 LTBP1Q14766 1721 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 GOLIM4O00461 696 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 RNF113AO15541 343 aaKnown RBP10.93□□□□□ -0.66
NR1I3-230ENST00000511944 KDM4AO75164 1064 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 MCAMP43121 646 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 PHKA1P46020 1223 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 KCNJ4P48050 445 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 RABEP1Q15276 862 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 UBE3CQ15386 1083 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 MCMDC2Q4G0Z9 681 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 CC2D2BQ6DHV5 1058 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 FBXO33Q7Z6M2 555 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 DEFB132Q7Z7B7 95 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 SPATA5Q8NB90 893 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
NR1I3-230ENST00000511944 KCNB2Q92953 911 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 SNX21Q969T3 373 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 ANO2Q9NQ90 1003 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 ATP6V0A2Q9Y487 856 aa10.93□□□□□ -0.66
NR1I3-230ENST00000511944 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 SALL1Q9NSC2 1324 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 TAF5LO75529 589 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 MAP4K4O95819 1239 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-230ENST00000511944 HSPA4P34932 840 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 ZAP70P43403 619 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 NMIQ13287 307 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-230ENST00000511944 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 CWC27Q6UX04 472 aaKnown RBP10.92□□□□□ -0.66
NR1I3-230ENST00000511944 APPBP2Q92624 585 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 TBC1D2Q9BYX2 928 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 LSG1Q9H089 658 aaKnown RBP10.92□□□□□ -0.66
NR1I3-230ENST00000511944 TMX4Q9H1E5 349 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-230ENST00000511944 HMG20BQ9P0W2 317 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 DOCK2Q92608 1830 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 COL11A2P13942 1736 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-230ENST00000511944 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
NR1I3-230ENST00000511944 DLEC1Q9Y238 1755 aa10.91□□□□□ -0.66
NR1I3-230ENST00000511944 H0YIN7 160 aa10.91□□□□□ -0.66
NR1I3-230ENST00000511944 PPEF1O14829 653 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-230ENST00000511944 HIBADHP31937 336 aaKnown RBP10.91□□□□□ -0.66
NR1I3-230ENST00000511944 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms