RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 WNK4Q96J92 1243 aa12.73□□□□□ -0.37
PFDN1-203ENST00000510217 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
PFDN1-203ENST00000510217 LDHBP07195 334 aaKnown RBP12.72□□□□□ -0.37
PFDN1-203ENST00000510217 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
PFDN1-203ENST00000510217 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
PFDN1-203ENST00000510217 FKBP1CQ5VVH2 108 aa12.72□□□□□ -0.37
PFDN1-203ENST00000510217 FAM83AQ86UY5 434 aa12.72□□□□□ -0.37
PFDN1-203ENST00000510217 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
PFDN1-203ENST00000510217 SSH3Q8TE77 659 aa12.72□□□□□ -0.37
PFDN1-203ENST00000510217 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
PFDN1-203ENST00000510217 MCOLN1Q9GZU1 580 aa12.72□□□□□ -0.37
PFDN1-203ENST00000510217 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
PFDN1-203ENST00000510217 ZBTB7BO15156 539 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-203ENST00000510217 ZGPATQ8N5A5 531 aaKnown RBP12.71□□□□□ -0.37
PFDN1-203ENST00000510217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.71□□□□□ -0.37
PFDN1-203ENST00000510217 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
PFDN1-203ENST00000510217 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-203ENST00000510217 GAKO14976 1311 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 MANSC4A6NHS7 340 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-203ENST00000510217 TBC1D8O95759 1140 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 ARID4AP29374 1257 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-203ENST00000510217 ATP8B2P98198 1209 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 NFIAQ12857 509 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
PFDN1-203ENST00000510217 VGLL4Q14135 290 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 CDC42EP5Q6NZY7 148 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 PI16Q6UXB8 463 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-203ENST00000510217 NEUROD6Q96NK8 337 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 CFHR5Q9BXR6 569 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 ELP3Q9H9T3 547 aa12.7□□□□□ -0.38
PFDN1-203ENST00000510217 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
PFDN1-203ENST00000510217 DGKZQ13574 1117 aa12.69□□□□□ -0.38
PFDN1-203ENST00000510217 CEP85Q6P2H3 762 aa12.69□□□□□ -0.38
PFDN1-203ENST00000510217 DZIP1Q86YF9 867 aaKnown RBP12.69□□□□□ -0.38
PFDN1-203ENST00000510217 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
PFDN1-203ENST00000510217 ZNF384Q8TF68 577 aa12.69□□□□□ -0.38
PFDN1-203ENST00000510217 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
PFDN1-203ENST00000510217 HMG20BQ9P0W2 317 aa12.69□□□□□ -0.38
PFDN1-203ENST00000510217 FAM198AQ9UFP1 575 aa12.69□□□□□ -0.38
PFDN1-203ENST00000510217 ABCF2Q9UG63 623 aa12.69□□□□□ -0.38
PFDN1-203ENST00000510217 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
PFDN1-203ENST00000510217 MCAMP43121 646 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 TNNI3KQ59H18 835 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 SPATA5Q8NB90 893 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 ZNF296Q8WUU4 475 aaPredicted RBP12.68□□□□□ -0.38
PFDN1-203ENST00000510217 FAM151AQ8WW52 585 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 R3HDMLQ9H3Y0 253 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 GPR108Q9NPR9 543 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 NOP58Q9Y2X3 529 aaKnown RBP12.68□□□□□ -0.38
PFDN1-203ENST00000510217 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 FPGT-TNNI3KV9GXZ4 949 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 ATRNL1Q5VV63 1379 aa12.68□□□□□ -0.38
PFDN1-203ENST00000510217 MROH7-TTC4A0A0A0MT08 1334 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 SURF6O75683 361 aaKnown RBP12.67□□□□□ -0.38
PFDN1-203ENST00000510217 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 MECOMQ03112 1051 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 TCP10Q12799 353 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 NOM1Q5C9Z4 860 aaKnown RBP12.67□□□□□ -0.38
PFDN1-203ENST00000510217 GORABQ5T7V8 394 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
PFDN1-203ENST00000510217 WRNIP1Q96S55 665 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 DBNDD2Q9BQY9 259 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 CSADQ9Y600 493 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 CDK5RAP2Q96SN8 1893 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
PFDN1-203ENST00000510217 DOCK1Q14185 1865 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
PFDN1-203ENST00000510217 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 GPR25O00155 361 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 ALDH1A1P00352 501 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 BTDP43251 543 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 INHBEP58166 350 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 OS9Q13438 667 aaPredicted RBP12.66□□□□□ -0.38
PFDN1-203ENST00000510217 DCAF15Q66K64 600 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
PFDN1-203ENST00000510217 ERICH6Q7L0X2 663 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 CTU1Q7Z7A3 348 aaKnown RBP12.66□□□□□ -0.38
PFDN1-203ENST00000510217 ZFPM1Q8IX07 1006 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 HOOK2Q96ED9 719 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 PTPN18Q99952 460 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 IDI2Q9BXS1 227 aa12.66□□□□□ -0.38
PFDN1-203ENST00000510217 TLR7Q9NYK1 1049 aaKnown RBP12.66□□□□□ -0.38
PFDN1-203ENST00000510217 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
PFDN1-203ENST00000510217 UQCRFS1P1P0C7P4 283 aa12.65□□□□□ -0.38
PFDN1-203ENST00000510217 INPP5BP32019 993 aa12.65□□□□□ -0.38
PFDN1-203ENST00000510217 RGS3P49796 1198 aa12.65□□□□□ -0.38
PFDN1-203ENST00000510217 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
PFDN1-203ENST00000510217 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
PFDN1-203ENST00000510217 ZKSCAN4Q969J2 545 aaPredicted RBP12.65□□□□□ -0.38
PFDN1-203ENST00000510217 NSUN4Q96CB9 384 aaKnown RBP12.65□□□□□ -0.38
PFDN1-203ENST00000510217 ZNF341Q9BYN7 854 aa12.65□□□□□ -0.38
PFDN1-203ENST00000510217 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
PFDN1-203ENST00000510217 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
PFDN1-203ENST00000510217 RCAN3Q9UKA8 241 aa12.65□□□□□ -0.38
PFDN1-203ENST00000510217 SIPA1L1O43166 1804 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms