RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ABCF2Q9UG63 623 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 NDUFB9Q9Y6M9 179 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 SALL3Q9BXA9 1300 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 MAST2Q6P0Q8 1798 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 MCAMP43121 646 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 RASGRF1Q13972 1273 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 DIXDC1Q155Q3 683 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 TSHZ3Q63HK5 1081 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 SPTY2D1Q68D10 685 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 SKAP1Q86WV1 359 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 ZNF384Q8TF68 577 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 TMEM39BQ9GZU3 492 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 GPR108Q9NPR9 543 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 RNF186Q9NXI6 227 aa10.73□□□□□ -0.69
PDLIM5-213ENST00000509357 PAPPA2Q9BXP8 1791 aa10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 PRDX5P30044 214 aa10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 SREBF2Q12772 1141 aa10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 LDLRAD1Q5T700 205 aa10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 APOBEC3HQ6NTF7 200 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 SLF2Q8IX21 1173 aa10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 SMC5Q8IY18 1101 aa10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 MYH2Q9UKX2 1941 aa10.72□□□□□ -0.69
PDLIM5-213ENST00000509357 HMMRO75330 724 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 USP2O75604 605 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 CHGBP05060 677 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 UQCRFS1P1P0C7P4 283 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 MYH7P12883 1935 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 ARID4AP29374 1257 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 CCDC158Q5M9N0 1113 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 TTC39AQ5SRH9 613 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 AACSQ86V21 672 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 ANKRD13AQ8IZ07 590 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 HOOK2Q96ED9 719 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 KIF1BPQ96EK5 621 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 CLMNQ96JQ2 1002 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 BCL11AQ9H165 835 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 CHMP4BQ9H444 224 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 SALL1Q9NSC2 1324 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 USP40Q9NVE5 1235 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 SAGE1Q9NXZ1 904 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 RAI14Q9P0K7 980 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 HMG20BQ9P0W2 317 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
PDLIM5-213ENST00000509357 UNCXA6NJT0 531 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 ZBTB22O15209 634 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 RAB11FIP3O75154 756 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 PDE4AP27815 886 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 TCP10Q12799 353 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 MAP3K11Q16584 847 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 FKBP1CQ5VVH2 108 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 SPRYD7Q5W111 196 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 CDC42EP5Q6NZY7 148 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 CDAN1Q8IWY9 1227 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 SPATA5Q8NB90 893 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 EDC3Q96F86 508 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 ANTXR1Q9H6X2 564 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 ELP3Q9H9T3 547 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 CSADQ9Y600 493 aa10.7□□□□□ -0.7
PDLIM5-213ENST00000509357 MANSC4A6NHS7 340 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 GSTO1P78417 241 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 DCAF15Q66K64 600 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 FAM83AQ86UY5 434 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 ERC1Q8IUD2 1116 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 ZSCAN29Q8IWY8 852 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 WNK4Q96J92 1243 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 TEPSINQ96N21 525 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 LRRCC1Q9C099 1032 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 SNRKQ9NRH2 765 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 LRP2BPQ9P2M1 347 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 THSD7BQ9C0I4 1608 aa10.69□□□□□ -0.7
PDLIM5-213ENST00000509357 PDS5AQ29RF7 1337 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 TBC1D8O95759 1140 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 CYP2E1P05181 493 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 LDHCP07864 332 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 ZBTB48P10074 688 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 ZAP70P43403 619 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 TM4SF4P48230 202 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 INHBEP58166 350 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 DGKZQ13574 1117 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 AAMPQ13685 434 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 SLFNL1Q499Z3 407 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 HSP90AB4PQ58FF6 505 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 OTUD7BQ6GQQ9 843 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 B4GALNT3Q6L9W6 998 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 MIGA2Q7L4E1 593 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 PI4K2BQ8TCG2 481 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 FAM151AQ8WW52 585 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 WRNIP1Q96S55 665 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 NOL10Q9BSC4 688 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 PIH1D3Q9NQM4 214 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 SSC5DA1L4H1 1573 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 FOCADQ5VW36 1801 aa10.68□□□□□ -0.7
PDLIM5-213ENST00000509357 ALDH1A1P00352 501 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 BTDP43251 543 aa10.67□□□□□ -0.7
PDLIM5-213ENST00000509357 MECOMQ03112 1051 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms