RNA–Protein interactions for RNA: ENST00000507909.1

SRPK1-209, Transcript of SRSF protein kinase 1, humanhuman

TSL 4

Gene SRPK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-209ENST00000507909 USP50Q70EL3 339 aaPredicted RBP11.77□□□□□ -0.53
SRPK1-209ENST00000507909 MIGA1Q8NAN2 632 aa11.77□□□□□ -0.53
SRPK1-209ENST00000507909 TRPM4Q8TD43 1214 aa11.77□□□□□ -0.53
SRPK1-209ENST00000507909 OSBP2Q969R2 916 aa11.77□□□□□ -0.53
SRPK1-209ENST00000507909 AIDAQ96BJ3 306 aa11.77□□□□□ -0.53
SRPK1-209ENST00000507909 ZBED3Q96IU2 234 aaPredicted RBP11.77□□□□□ -0.53
SRPK1-209ENST00000507909 FAM227BQ96M60 508 aa11.77□□□□□ -0.53
SRPK1-209ENST00000507909 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
SRPK1-209ENST00000507909 AATFQ9NY61 560 aaKnown RBP eCLIP11.77□□□□□ -0.53
SRPK1-209ENST00000507909 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 A0A0D9SFI3 127 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 EGFRP00533 1210 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 NMIQ13287 307 aaPredicted RBP11.76□□□□□ -0.53
SRPK1-209ENST00000507909 MCMDC2Q4G0Z9 681 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 CWC27Q6UX04 472 aaKnown RBP11.76□□□□□ -0.53
SRPK1-209ENST00000507909 PNMA8AQ86V59 439 aaPredicted RBP11.76□□□□□ -0.53
SRPK1-209ENST00000507909 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
SRPK1-209ENST00000507909 RUFY2Q8WXA3 655 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 PRMT6Q96LA8 375 aaPredicted RBP11.76□□□□□ -0.53
SRPK1-209ENST00000507909 RIOK1Q9BRS2 568 aaKnown RBP11.76□□□□□ -0.53
SRPK1-209ENST00000507909 PUS7LQ9H0K6 701 aaKnown RBP11.76□□□□□ -0.53
SRPK1-209ENST00000507909 RRAGCQ9HB90 399 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 PCDHAC2Q9Y5I4 1007 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 RAD50Q92878 1312 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 FOCADQ5VW36 1801 aa11.76□□□□□ -0.53
SRPK1-209ENST00000507909 M0R2C6 588 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 GPAA1O43292 621 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 MBD4O95243 580 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 YY1P25490 414 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 MFAP1P55081 439 aaKnown RBP11.75□□□□□ -0.53
SRPK1-209ENST00000507909 RHBDL3P58872 404 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 CDC42EP5Q6NZY7 148 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
SRPK1-209ENST00000507909 NMRK2Q9NPI5 230 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 USP40Q9NVE5 1235 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 TMOD2Q9NZR1 351 aa11.75□□□□□ -0.53
SRPK1-209ENST00000507909 POLR2AP24928 1970 aaKnown RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 GNAT2P19087 354 aa11.74□□□□□ -0.53
SRPK1-209ENST00000507909 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 DYNLL1P63167 89 aaKnown RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 EAPPQ56P03 285 aaPredicted RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 TEX11Q8IYF3 940 aa11.74□□□□□ -0.53
SRPK1-209ENST00000507909 LCORLQ8N3X6 602 aa11.74□□□□□ -0.53
SRPK1-209ENST00000507909 SH3RF3Q8TEJ3 882 aaPredicted RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 SEC62Q99442 399 aaKnown RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 CRNKL1Q9BZJ0 848 aaKnown RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 TDRD3Q9H7E2 651 aaKnown RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 ARMT1Q9H993 441 aa11.74□□□□□ -0.53
SRPK1-209ENST00000507909 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
SRPK1-209ENST00000507909 CCDC171Q6TFL3 1326 aa11.74□□□□□ -0.53
SRPK1-209ENST00000507909 PITPNM2Q9BZ72 1349 aa11.74□□□□□ -0.53
SRPK1-209ENST00000507909 CLRN2A0PK11 232 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 SGSM2O43147 1006 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 WDHD1O75717 1129 aaPredicted RBP11.73□□□□□ -0.53
SRPK1-209ENST00000507909 TNFAIP1Q13829 316 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 FKBP1CQ5VVH2 108 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 CCDC129Q6ZRS4 1044 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 ZNF589Q86UQ0 364 aaPredicted RBP11.73□□□□□ -0.53
SRPK1-209ENST00000507909 APOBEC3FQ8IUX4 373 aaKnown RBP11.73□□□□□ -0.53
SRPK1-209ENST00000507909 NAV1Q8NEY1 1877 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 ESYT1Q9BSJ8 1104 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 IDI2Q9BXS1 227 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 VEZTQ9HBM0 779 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
SRPK1-209ENST00000507909 RPAP1Q9BWH6 1393 aaPredicted RBP11.72□□□□□ -0.53
SRPK1-209ENST00000507909 ASTN2O75129 1339 aaPredicted RBP11.72□□□□□ -0.53
SRPK1-209ENST00000507909 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
SRPK1-209ENST00000507909 USP5P45974 858 aa11.72□□□□□ -0.53
SRPK1-209ENST00000507909 ANGEL2Q5VTE6 544 aaKnown RBP11.72□□□□□ -0.53
SRPK1-209ENST00000507909 LDHDQ86WU2 507 aa11.72□□□□□ -0.53
SRPK1-209ENST00000507909 POTEDQ86YR6 584 aa11.72□□□□□ -0.53
SRPK1-209ENST00000507909 TGFBRAP1Q8WUH2 860 aa11.72□□□□□ -0.53
SRPK1-209ENST00000507909 IL25Q9H293 177 aa11.72□□□□□ -0.53
SRPK1-209ENST00000507909 SLC4A4Q9Y6R1 1079 aa11.72□□□□□ -0.53
SRPK1-209ENST00000507909 MYH1P12882 1939 aa11.72□□□□□ -0.53
SRPK1-209ENST00000507909 BAZ2AQ9UIF9 1905 aaKnown RBP11.72□□□□□ -0.53
SRPK1-209ENST00000507909 FLT1P17948 1338 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 TNNI2P48788 182 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 CACNB3P54284 484 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 NFIAQ12857 509 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 GIMAP6Q6P9H5 292 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 FAM83AQ86UY5 434 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 SDR42E1Q8WUS8 393 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 DCPSQ96C86 337 aaKnown RBP11.71□□□□□ -0.53
SRPK1-209ENST00000507909 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 PGAP2Q9UHJ9 254 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 PPP2R3BQ9Y5P8 575 aa11.71□□□□□ -0.53
SRPK1-209ENST00000507909 DDX60LQ5H9U9 1706 aaKnown RBP11.71□□□□□ -0.54
SRPK1-209ENST00000507909 COL2A1P02458 1487 aaPredicted RBP11.7□□□□□ -0.54
SRPK1-209ENST00000507909 TCP10L2B9ZVM9 353 aa11.7□□□□□ -0.54
SRPK1-209ENST00000507909 PATL2C9JE40 543 aaKnown RBP11.7□□□□□ -0.54
SRPK1-209ENST00000507909 PRKAB2O43741 272 aa11.7□□□□□ -0.54
SRPK1-209ENST00000507909 EIF5BO60841 1220 aaKnown RBP11.7□□□□□ -0.54
SRPK1-209ENST00000507909 ENTPD3O75355 529 aa11.7□□□□□ -0.54
SRPK1-209ENST00000507909 HSPD1P10809 573 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms