RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 NFIXQ14938 502 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 ADGRA1Q86SQ6 560 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 KRT23Q9C075 422 aa20.7■□□□□ 0.9
SFXN1-208ENST00000507823 ANP32BQ92688 251 aaKnown RBP20.69■□□□□ 0.9
SFXN1-208ENST00000507823 LY9Q9HBG7 655 aa20.69■□□□□ 0.9
SFXN1-208ENST00000507823 SLC27A3Q5K4L6 730 aa20.69■□□□□ 0.9
SFXN1-208ENST00000507823 TFIP11Q9UBB9 837 aaKnown RBP20.69■□□□□ 0.9
SFXN1-208ENST00000507823 RCOR1Q9UKL0 485 aa20.69■□□□□ 0.9
SFXN1-208ENST00000507823 APOA5Q6Q788 366 aa20.68■□□□□ 0.9
SFXN1-208ENST00000507823 NAP1L2Q9ULW6 460 aaPredicted RBP20.68■□□□□ 0.9
SFXN1-208ENST00000507823 ZNF384Q8TF68 577 aa20.68■□□□□ 0.9
SFXN1-208ENST00000507823 BRWD3Q6RI45 1802 aa20.67■□□□□ 0.9
SFXN1-208ENST00000507823 ILDR1Q86SU0 546 aaPredicted RBP20.67■□□□□ 0.9
SFXN1-208ENST00000507823 PGBD1Q96JS3 809 aa20.67■□□□□ 0.9
SFXN1-208ENST00000507823 IQSEC3Q9UPP2 1182 aaPredicted RBP20.67■□□□□ 0.9
SFXN1-208ENST00000507823 MAGEB6P1A0A0J9YX57 407 aa20.67■□□□□ 0.9
SFXN1-208ENST00000507823 UVSSAQ2YD98 709 aa20.67■□□□□ 0.9
SFXN1-208ENST00000507823 GIMAP6Q6P9H5 292 aa20.67■□□□□ 0.9
SFXN1-208ENST00000507823 ZSWIM5Q9P217 1185 aa20.67■□□□□ 0.9
SFXN1-208ENST00000507823 KLRK1P26718 216 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 HIBADHP31937 336 aaKnown RBP20.66■□□□□ 0.9
SFXN1-208ENST00000507823 CTDSPL2Q05D32 466 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 VPS37DQ86XT2 251 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 FBXO18Q8NFZ0 1043 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 RAI14Q9P0K7 980 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 ORC3Q9UBD5 711 aaPredicted RBP20.66■□□□□ 0.9
SFXN1-208ENST00000507823 TDO2P48775 406 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 GRAPQ13588 217 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 RBM43Q6ZSC3 357 aaKnown RBP20.66■□□□□ 0.9
SFXN1-208ENST00000507823 MFSD6Q6ZSS7 791 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 MIGA1Q8NAN2 632 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 GRAPLQ8TC17 118 aaPredicted RBP20.66■□□□□ 0.9
SFXN1-208ENST00000507823 BRIP1Q9BX63 1249 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 RNF41Q9H4P4 317 aaPredicted RBP20.66■□□□□ 0.9
SFXN1-208ENST00000507823 ABCF2Q9UG63 623 aa20.66■□□□□ 0.9
SFXN1-208ENST00000507823 LIG1P18858 919 aa20.65■□□□□ 0.9
SFXN1-208ENST00000507823 ZNF396Q96N95 335 aaPredicted RBP20.65■□□□□ 0.9
SFXN1-208ENST00000507823 QTRT2Q9H974 415 aaKnown RBP20.65■□□□□ 0.9
SFXN1-208ENST00000507823 CDKL5O76039 1030 aa20.65■□□□□ 0.9
SFXN1-208ENST00000507823 RCAN1P53805 252 aa20.65■□□□□ 0.9
SFXN1-208ENST00000507823 C15orf52Q6ZUT6 534 aaKnown RBP20.65■□□□□ 0.9
SFXN1-208ENST00000507823 NSUN4Q96CB9 384 aaKnown RBP20.65■□□□□ 0.9
SFXN1-208ENST00000507823 DDX19AQ9NUU7 478 aaKnown RBP20.65■□□□□ 0.9
SFXN1-208ENST00000507823 ECM29Q5VYK3 1845 aa20.65■□□□□ 0.9
SFXN1-208ENST00000507823 CPLX1O14810 134 aa20.64■□□□□ 0.9
SFXN1-208ENST00000507823 METAP2P50579 478 aaKnown RBP eCLIP20.64■□□□□ 0.9
SFXN1-208ENST00000507823 NTRK3Q16288 839 aa20.64■□□□□ 0.9
SFXN1-208ENST00000507823 CNBD1Q8NA66 436 aa20.64■□□□□ 0.9
SFXN1-208ENST00000507823 SENP2Q9HC62 589 aa20.64■□□□□ 0.9
SFXN1-208ENST00000507823 FAM217BQ9NTX9 383 aaPredicted RBP20.64■□□□□ 0.9
SFXN1-208ENST00000507823 CCDC88AQ3V6T2 1871 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.64■□□□□ 0.89
SFXN1-208ENST00000507823 KDM4AO75164 1064 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 FGRP09769 529 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 PPARAQ07869 468 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 CRY2Q49AN0 593 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 TMEM67Q5HYA8 995 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 C8orf76Q96K31 380 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 INCENPQ9NQS7 918 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 LEMD3Q9Y2U8 911 aa20.64■□□□□ 0.89
SFXN1-208ENST00000507823 HS1BP3Q53T59 392 aa20.63■□□□□ 0.89
SFXN1-208ENST00000507823 STK36Q9NRP7 1315 aa20.63■□□□□ 0.89
SFXN1-208ENST00000507823 ZBTB43O43298 467 aa20.63■□□□□ 0.89
SFXN1-208ENST00000507823 PCP11498 1178 aaKnown RBP20.63■□□□□ 0.89
SFXN1-208ENST00000507823 GYS1P13807 737 aa20.63■□□□□ 0.89
SFXN1-208ENST00000507823 PRR5LQ6MZQ0 368 aa20.63■□□□□ 0.89
SFXN1-208ENST00000507823 CCDC24Q8N4L8 307 aa20.63■□□□□ 0.89
SFXN1-208ENST00000507823 BRAPQ7Z569 592 aa20.62■□□□□ 0.89
SFXN1-208ENST00000507823 USP28Q96RU2 1077 aa20.62■□□□□ 0.89
SFXN1-208ENST00000507823 DUOX1Q9NRD9 1551 aa20.62■□□□□ 0.89
SFXN1-208ENST00000507823 CDC27P30260 824 aa20.62■□□□□ 0.89
SFXN1-208ENST00000507823 GOLGA6L4A6NEF3 574 aa20.61■□□□□ 0.89
SFXN1-208ENST00000507823 IFIT3O14879 490 aaKnown RBP20.61■□□□□ 0.89
SFXN1-208ENST00000507823 HMGB2P26583 209 aaKnown RBP20.61■□□□□ 0.89
SFXN1-208ENST00000507823 CPLX2Q6PUV4 134 aaKnown RBP20.61■□□□□ 0.89
SFXN1-208ENST00000507823 TMTC2Q8N394 836 aa20.61■□□□□ 0.89
SFXN1-208ENST00000507823 NUP62CLQ9H1M0 184 aa20.61■□□□□ 0.89
SFXN1-208ENST00000507823 RRAGDQ9NQL2 400 aaPredicted RBP20.61■□□□□ 0.89
SFXN1-208ENST00000507823 RTEL1Q9NZ71 1219 aa20.61■□□□□ 0.89
SFXN1-208ENST00000507823 DLEC1Q9Y238 1755 aa20.61■□□□□ 0.89
SFXN1-208ENST00000507823 CLSTN2Q9H4D0 955 aa20.61■□□□□ 0.89
SFXN1-208ENST00000507823 LAMB1P07942 1786 aa20.61■□□□□ 0.89
SFXN1-208ENST00000507823 MECOMQ03112 1051 aa20.6■□□□□ 0.89
SFXN1-208ENST00000507823 SDR42E1Q8WUS8 393 aa20.6■□□□□ 0.89
SFXN1-208ENST00000507823 KRT27Q7Z3Y8 459 aa20.6■□□□□ 0.89
SFXN1-208ENST00000507823 TRIM44Q96DX7 344 aaPredicted RBP20.6■□□□□ 0.89
SFXN1-208ENST00000507823 DACT1Q9NYF0 836 aa20.6■□□□□ 0.89
SFXN1-208ENST00000507823 TFCP2L1Q9NZI6 479 aa20.6■□□□□ 0.89
SFXN1-208ENST00000507823 BAZ2AQ9UIF9 1905 aaKnown RBP20.6■□□□□ 0.89
SFXN1-208ENST00000507823 GUCY1B3Q02153 619 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 SART3Q15020 963 aaKnown RBP20.59■□□□□ 0.89
SFXN1-208ENST00000507823 TXNRD3Q86VQ6 643 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 RAB11FIP4Q86YS3 637 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 RNF214Q8ND24 703 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 SLC12A7Q9Y666 1083 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 XDHP47989 1333 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 GOLGA8AA7E2F4 631 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 FOSBP53539 338 aa20.59■□□□□ 0.89
SFXN1-208ENST00000507823 DYNLL1P63167 89 aaKnown RBP20.59■□□□□ 0.89
SFXN1-208ENST00000507823 KIF23Q02241 960 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms